RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 C3orf56Q8N813 242 aa11.66□□□□□ -0.54
LMNB1-203ENST00000460265 KLK9Q9UKQ9 250 aa11.66□□□□□ -0.54
LMNB1-203ENST00000460265 ZNF256Q9Y2P7 627 aaPredicted RBP11.66□□□□□ -0.54
LMNB1-203ENST00000460265 DSCR9P59020 149 aa11.65□□□□□ -0.54
LMNB1-203ENST00000460265 ANKRD29Q8N6D5 301 aa11.65□□□□□ -0.54
LMNB1-203ENST00000460265 TMEM190Q8WZ59 177 aa11.65□□□□□ -0.54
LMNB1-203ENST00000460265 RAX2Q96IS3 184 aa11.65□□□□□ -0.54
LMNB1-203ENST00000460265 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.54
LMNB1-203ENST00000460265 HELZ2Q9BYK8 2649 aaKnown RBP11.65□□□□□ -0.54
LMNB1-203ENST00000460265 RHODO00212 210 aa11.65□□□□□ -0.54
LMNB1-203ENST00000460265 LINC01559Q495D7 138 aa11.65□□□□□ -0.54
LMNB1-203ENST00000460265 MEIG1Q5JSS6 88 aa11.65□□□□□ -0.54
LMNB1-203ENST00000460265 CHD6Q8TD26 2715 aa11.65□□□□□ -0.55
LMNB1-203ENST00000460265 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.55
LMNB1-203ENST00000460265 TRAV4A0A0B4J268 109 aa11.65□□□□□ -0.55
LMNB1-203ENST00000460265 ZNF56Q15929 161 aa11.64□□□□□ -0.55
LMNB1-203ENST00000460265 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
LMNB1-203ENST00000460265 RBAKDNA6NC62 111 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 EMP1P54849 157 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 DYNLRB2Q8TF09 96 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 NF1P21359 2839 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 IGHV3-73A0A0B4J1V6 119 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 LAGE3Q14657 143 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 RPL39LQ96EH5 51 aaKnown RBP11.63□□□□□ -0.55
LMNB1-203ENST00000460265 CSMD2Q7Z408 3487 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 JPT2Q9H910 190 aa11.63□□□□□ -0.55
LMNB1-203ENST00000460265 TCL1BO95988 128 aa11.62□□□□□ -0.55
LMNB1-203ENST00000460265 RNF185Q96GF1 192 aa11.61□□□□□ -0.55
LMNB1-203ENST00000460265 ZNF815PA8K554 130 aa11.61□□□□□ -0.55
LMNB1-203ENST00000460265 C9JAW5 83 aa11.6□□□□□ -0.55
LMNB1-203ENST00000460265 DPH3P1Q9H4G8 78 aa11.6□□□□□ -0.55
LMNB1-203ENST00000460265 CRLF1O75462 422 aa11.6□□□□□ -0.55
LMNB1-203ENST00000460265 PLNP26678 52 aa11.6□□□□□ -0.55
LMNB1-203ENST00000460265 A0A087WX48 190 aa11.59□□□□□ -0.55
LMNB1-203ENST00000460265 IGHV4OR15-8A0A075B7B6 117 aa11.59□□□□□ -0.55
LMNB1-203ENST00000460265 A0A087WW49 117 aa11.59□□□□□ -0.55
LMNB1-203ENST00000460265 HOXD3P31249 432 aaPredicted RBP11.59□□□□□ -0.55
LMNB1-203ENST00000460265 SLURP1P55000 103 aa11.59□□□□□ -0.55
LMNB1-203ENST00000460265 VPS13CQ709C8 3753 aa11.59□□□□□ -0.55
LMNB1-203ENST00000460265 KNCNA6PVL3 124 aa11.59□□□□□ -0.55
LMNB1-203ENST00000460265 H7C2G1 150 aa11.59□□□□□ -0.55
LMNB1-203ENST00000460265 DEFB131AP59861 70 aa11.59□□□□□ -0.55
LMNB1-203ENST00000460265 FBN2P35556 2912 aa11.58□□□□□ -0.56
LMNB1-203ENST00000460265 SLC25A20O43772 301 aa11.58□□□□□ -0.56
LMNB1-203ENST00000460265 SUMO2P61956 95 aaKnown RBP11.58□□□□□ -0.56
LMNB1-203ENST00000460265 ZFAND2AQ8N6M9 145 aa11.58□□□□□ -0.56
LMNB1-203ENST00000460265 Q8N8P6 123 aa11.58□□□□□ -0.56
LMNB1-203ENST00000460265 PPDPFQ9H3Y8 114 aa11.58□□□□□ -0.56
LMNB1-203ENST00000460265 VPREB3Q9UKI3 123 aa11.58□□□□□ -0.56
LMNB1-203ENST00000460265 LGALS1P09382 135 aaKnown RBP11.58□□□□□ -0.56
LMNB1-203ENST00000460265 U3KQE9 123 aa11.58□□□□□ -0.56
LMNB1-203ENST00000460265 M0QXV9 152 aa11.57□□□□□ -0.56
LMNB1-203ENST00000460265 MRPL53Q96EL3 112 aaKnown RBP11.57□□□□□ -0.56
LMNB1-203ENST00000460265 MXRA5Q9NR99 2828 aa11.57□□□□□ -0.56
LMNB1-203ENST00000460265 H7C1H1 209 aa11.57□□□□□ -0.56
LMNB1-203ENST00000460265 ZNF843Q8N446 348 aa11.57□□□□□ -0.56
LMNB1-203ENST00000460265 KLHL30-AS1Q8NEE0 82 aa11.57□□□□□ -0.56
LMNB1-203ENST00000460265 H3BUA1 57 aa11.56□□□□□ -0.56
LMNB1-203ENST00000460265 C15orf53Q8NAA6 179 aa11.56□□□□□ -0.56
LMNB1-203ENST00000460265 C18orf65Q6ZTR6 163 aa11.56□□□□□ -0.56
LMNB1-203ENST00000460265 GPHB5Q86YW7 130 aa11.56□□□□□ -0.56
LMNB1-203ENST00000460265 PRADC1Q9BSG0 188 aa11.56□□□□□ -0.56
LMNB1-203ENST00000460265 F8VRH5 84 aa11.55□□□□□ -0.56
LMNB1-203ENST00000460265 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
LMNB1-203ENST00000460265 SMIM2Q9BVW6 85 aa11.55□□□□□ -0.56
LMNB1-203ENST00000460265 FLNBO75369 2602 aaKnown RBP11.55□□□□□ -0.56
LMNB1-203ENST00000460265 UBE2D3P61077 147 aa11.55□□□□□ -0.56
LMNB1-203ENST00000460265 UBE2D2P62837 147 aa11.55□□□□□ -0.56
LMNB1-203ENST00000460265 DEFB113Q30KQ7 82 aa11.55□□□□□ -0.56
LMNB1-203ENST00000460265 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
LMNB1-203ENST00000460265 TRAV8-4A0A0B4J246 113 aa11.54□□□□□ -0.56
LMNB1-203ENST00000460265 PRM2P04554 102 aa11.54□□□□□ -0.56
LMNB1-203ENST00000460265 MDFICQ9P1T7 246 aa11.54□□□□□ -0.56
LMNB1-203ENST00000460265 C2orf66Q6UXQ4 117 aa11.54□□□□□ -0.56
LMNB1-203ENST00000460265 PLEKHB2Q96CS7 222 aa11.54□□□□□ -0.56
LMNB1-203ENST00000460265 IGLV1-40P01703 118 aa11.53□□□□□ -0.56
LMNB1-203ENST00000460265 Q1RN00 199 aa11.53□□□□□ -0.56
LMNB1-203ENST00000460265 TMEM170BQ5T4T1 132 aa11.53□□□□□ -0.56
LMNB1-203ENST00000460265 ITPR2Q14571 2701 aa11.53□□□□□ -0.56
LMNB1-203ENST00000460265 NDUFA11Q86Y39 141 aa11.53□□□□□ -0.56
LMNB1-203ENST00000460265 PSMB8P28062 276 aa11.52□□□□□ -0.56
LMNB1-203ENST00000460265 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.56
LMNB1-203ENST00000460265 LENEPQ9Y5L5 61 aa11.52□□□□□ -0.56
LMNB1-203ENST00000460265 TRPT1Q86TN4 253 aaKnown RBP11.52□□□□□ -0.57
LMNB1-203ENST00000460265 LINC01587Q99440 93 aa11.52□□□□□ -0.57
LMNB1-203ENST00000460265 IGHV4-31P0DP07 118 aa11.52□□□□□ -0.57
LMNB1-203ENST00000460265 UBE2D1P51668 147 aa11.52□□□□□ -0.57
LMNB1-203ENST00000460265 SPANXA1Q9NS26 97 aa11.52□□□□□ -0.57
LMNB1-203ENST00000460265 APRG1Q8IVJ8 170 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 WFDC11Q8NEX6 87 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 UBE2E2Q96LR5 201 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 TRAV2A0A0B4J234 112 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 J3QLI3 93 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 IGHV3-64A0A075B6Q5 118 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 Q8N1Y9 231 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 CHCHD5Q9BSY4 110 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 ZFHX3Q15911 3703 aa11.51□□□□□ -0.57
LMNB1-203ENST00000460265 LINC01619G3V211 115 aa11.5□□□□□ -0.57
LMNB1-203ENST00000460265 CRIP2P52943 208 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms