RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 TRGV2A0A075B6R0 118 aa6.9□□□□□ -1.3
NUDCD3-203ENST00000460110 RBMY1A1P0DJD3 496 aaKnown RBP6.9□□□□□ -1.3
NUDCD3-203ENST00000460110 RBMY1CP0DJD4 496 aa6.9□□□□□ -1.3
NUDCD3-203ENST00000460110 RBMY1FQ15415 496 aaKnown RBP6.9□□□□□ -1.3
NUDCD3-203ENST00000460110 SUMO4Q6EEV6 95 aa6.9□□□□□ -1.3
NUDCD3-203ENST00000460110 RAB37Q96AX2 223 aa6.9□□□□□ -1.3
NUDCD3-203ENST00000460110 ZC2HC1BQ5TFG8 222 aa6.9□□□□□ -1.31
NUDCD3-203ENST00000460110 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.9□□□□□ -1.31
NUDCD3-203ENST00000460110 SMIM2Q9BVW6 85 aa6.9□□□□□ -1.31
NUDCD3-203ENST00000460110 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 TAX1BP3O14907 124 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 RRN3P1Q2M238 152 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 Q8N8P6 123 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 RASL10AQ92737 203 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 AZU1P20160 251 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 GTSCR1Q86UQ5 136 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 LINC00482Q8N8I6 264 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 TNFRSF18Q9Y5U5 241 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 DEFB130BP0DP73 79 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 DEFB130AP0DP74 79 aa6.89□□□□□ -1.31
NUDCD3-203ENST00000460110 DEFB4AO15263 64 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 TTTY13Q9BZ97 58 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 H3BUT2 72 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 GAGE7O76087 117 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 GAGE12FP0CL80 117 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 GAGE12GP0CL81 117 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 GAGE12IP0CL82 117 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 ZNF415Q09FC8 603 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 RNASE13Q5GAN3 156 aaKnown RBP6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 C2orf66Q6UXQ4 117 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 Q8N976 141 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 MRAP2Q96G30 205 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 CNFNQ9BYD5 112 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 AMTNQ6UX39 209 aa6.88□□□□□ -1.31
NUDCD3-203ENST00000460110 BVES-AS1Q5T3Y7 98 aa6.87□□□□□ -1.31
NUDCD3-203ENST00000460110 NRACQ8N912 160 aa6.87□□□□□ -1.31
NUDCD3-203ENST00000460110 TP53TG1Q9Y2A0 90 aa6.87□□□□□ -1.31
NUDCD3-203ENST00000460110 A0A096LNJ9 63 aa6.87□□□□□ -1.31
NUDCD3-203ENST00000460110 IGKV3OR2-268A0A0C4DH90 116 aa6.87□□□□□ -1.31
NUDCD3-203ENST00000460110 CRXO43186 299 aaPredicted RBP6.87□□□□□ -1.31
NUDCD3-203ENST00000460110 MRPL35Q9NZE8 188 aaKnown RBP6.87□□□□□ -1.31
NUDCD3-203ENST00000460110 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 OPRPNQ99935 248 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 U3KQK5 164 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 ATP5LO75964 103 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 Q9UF83 564 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 VCYO14598 125 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 HTN3P15516 51 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 KRTAP10-3P60369 221 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 ORMDL2Q53FV1 153 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 C3orf56Q8N813 242 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 SPATA3Q8NHX4 192 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 FAM19A4Q96LR4 140 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 CYSLTR1Q9Y271 337 aa6.86□□□□□ -1.31
NUDCD3-203ENST00000460110 TRBV7-9A0A0J9YWB2 115 aa6.85□□□□□ -1.31
NUDCD3-203ENST00000460110 TMEM170BQ5T4T1 132 aa6.85□□□□□ -1.31
NUDCD3-203ENST00000460110 Q6ZTI0 123 aa6.85□□□□□ -1.31
NUDCD3-203ENST00000460110 M0R2P5 195 aa6.85□□□□□ -1.31
NUDCD3-203ENST00000460110 G3V4G9 280 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 CRLF1O75462 422 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 PPP1R17O96001 155 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 CEMP1Q6PRD7 247 aaPredicted RBP6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 IGKCP01834 107 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 CRYGDP07320 174 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 CKS1BP61024 79 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 GAGE4Q13068 117 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 GAGE5Q13069 117 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 PCP2Q8IVA1 136 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 ZNRF2Q8NHG8 242 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 C16orf95Q9H693 158 aa6.84□□□□□ -1.31
NUDCD3-203ENST00000460110 A6NDN8 102 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 H7C1H1 209 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 J3QR89 54 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 FHL3Q13643 280 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 SPCS1Q9Y6A9 102 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 TRGV4A0A0C4DH28 118 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 DPM2O94777 84 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 FBN1P35555 2871 aaKnown RBP6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 IGHV4-4A0A075B6R2 117 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 A0A096LPF7 62 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 TRAV25A0A0B4J276 109 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 LINC01545Q5VT33 79 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 NDUFA11Q86Y39 141 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 ODF3Q96PU9 254 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 SCRT2Q9NQ03 307 aa6.83□□□□□ -1.32
NUDCD3-203ENST00000460110 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
NUDCD3-203ENST00000460110 DEFB135Q30KP9 77 aa6.82□□□□□ -1.32
NUDCD3-203ENST00000460110 C9orf85Q96MD7 179 aa6.82□□□□□ -1.32
NUDCD3-203ENST00000460110 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
NUDCD3-203ENST00000460110 ZFP2Q6ZN57 461 aa6.82□□□□□ -1.32
NUDCD3-203ENST00000460110 TRPT1Q86TN4 253 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms