RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TRAV12-1A0A0B4J245 112 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 CXorf51AA0A1B0GTR3 108 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 CFDP00746 253 aaPredicted RBP2.12□□□□□ -2.07
CCDC50-203ENST00000460064 CXCL8P10145 99 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 KRTDAPP60985 99 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 WFDC2Q14508 124 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 ETDBQ3ZM63 59 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 BVES-AS1Q5T3Y7 98 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.12□□□□□ -2.07
CCDC50-203ENST00000460064 ZNF833PQ6ZTB9 187 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 ZNF431Q8TF32 576 aaPredicted RBP2.12□□□□□ -2.07
CCDC50-203ENST00000460064 MGST2Q99735 147 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 PTPRFP10586 1907 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 ARHGEF12Q9NZN5 1544 aa2.12□□□□□ -2.07
CCDC50-203ENST00000460064 MYH8P13535 1937 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 MUC22E2RYF6 1773 aaPredicted RBP2.11□□□□□ -2.07
CCDC50-203ENST00000460064 PPLO60437 1756 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 STRCQ7RTU9 1775 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 SHROOM2Q13796 1616 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 TRAV13-2A0A0B4J235 113 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 PIGBOS1A0A0B4J2F0 54 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 A0A1W2PPM0 123 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 NAP1L6A6NFF2 107 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 C2orf70A6NJV1 201 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 NMSQ5H8A3 153 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 RPL7L1Q6DKI1 246 aaKnown RBP2.11□□□□□ -2.07
CCDC50-203ENST00000460064 CLECL1Q8IZS7 167 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 ZNF625Q96I27 306 aaPredicted RBP2.11□□□□□ -2.07
CCDC50-203ENST00000460064 TRGV9Q99603 122 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 KIF20BQ96Q89 1820 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 CDK12Q9NYV4 1490 aaPredicted RBP2.11□□□□□ -2.07
CCDC50-203ENST00000460064 SHANK2Q9UPX8 1470 aa2.11□□□□□ -2.07
CCDC50-203ENST00000460064 ZC3H13Q5T200 1668 aaKnown RBP2.11□□□□□ -2.07
CCDC50-203ENST00000460064 ABCC8Q09428 1581 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 PXDNQ92626 1479 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 TRBV10-3A0A0K0K1G6 114 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 A6NIN4 97 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 SYS1-DBNDD2H3BUS1 97 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 S100ZQ8WXG8 99 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 CYP4F30PQ9H0H9 118 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 CDC42SE1Q9NRR8 79 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 HIGD1BQ9P298 99 aa2.1□□□□□ -2.07
CCDC50-203ENST00000460064 DIDO1Q9BTC0 2240 aaKnown RBP2.09□□□□□ -2.07
CCDC50-203ENST00000460064 CRYM-AS1A6NIL9 109 aa2.09□□□□□ -2.07
CCDC50-203ENST00000460064 NXT2Q9NPJ8 142 aaKnown RBP2.09□□□□□ -2.07
CCDC50-203ENST00000460064 MROH2BQ7Z745 1585 aa2.09□□□□□ -2.08
CCDC50-203ENST00000460064 KIF21BO75037 1637 aa2.09□□□□□ -2.08
CCDC50-203ENST00000460064 CFAP43Q8NDM7 1665 aa2.09□□□□□ -2.08
CCDC50-203ENST00000460064 EDC4Q6P2E9 1401 aaKnown RBP2.08□□□□□ -2.08
CCDC50-203ENST00000460064 RGPD4Q7Z3J3 1758 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 MAGI3Q5TCQ9 1506 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 GLI2P10070 1586 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 H7BZZ5 65 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 SIX6O95475 246 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 CNBPP62633 177 aaKnown RBP2.08□□□□□ -2.08
CCDC50-203ENST00000460064 MPV17LQ2QL34 196 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 CSAG1Q6PB30 78 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 C2orf82Q6UX34 121 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 HEPN1Q6WQI6 88 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 IFI27L1Q96BM0 104 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 ODF3Q96PU9 254 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 C22orf24Q9Y442 160 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 TET3O43151 1660 aa2.08□□□□□ -2.08
CCDC50-203ENST00000460064 TNS1Q9HBL0 1735 aaKnown RBP2.08□□□□□ -2.08
CCDC50-203ENST00000460064 MDC1Q14676 2089 aaKnown RBP2.08□□□□□ -2.08
CCDC50-203ENST00000460064 NCOA2Q15596 1464 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 UGGT2Q9NYU1 1516 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 SETBP1Q9Y6X0 1596 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 TARBP1Q13395 1621 aaKnown RBP2.07□□□□□ -2.08
CCDC50-203ENST00000460064 MADDQ8WXG6 1647 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 TRBV7-1A0A0A6YYK4 115 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 H3BUT2 72 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 NDUFC1O43677 76 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 IGHV3-33P01772 117 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 PDE6HQ13956 83 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 Q6ZRN7 208 aaPredicted RBP2.07□□□□□ -2.08
CCDC50-203ENST00000460064 BPESC1Q9GZL8 116 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 LAMB1P07942 1786 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 KIAA1549LQ6ZVL6 1849 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 ANKARQ7Z5J8 1434 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 PTPRDP23468 1912 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 CDK13Q14004 1512 aaKnown RBP2.07□□□□□ -2.08
CCDC50-203ENST00000460064 KIAA0586Q9BVV6 1533 aa2.07□□□□□ -2.08
CCDC50-203ENST00000460064 KIF14Q15058 1648 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 DOCK10Q96BY6 2186 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 PPRC1Q5VV67 1664 aaKnown RBP2.06□□□□□ -2.08
CCDC50-203ENST00000460064 RGPD3A6NKT7 1758 aaPredicted RBP2.06□□□□□ -2.08
CCDC50-203ENST00000460064 TRAV12-3A0A0B4J271 114 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 A0A0G2JND7 137 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 TEX49A0A1B0GTD5 131 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 TMEM30CPA0ZSE6 113 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 EFNA4P52798 201 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 SPATA45Q537H7 98 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 C1orf137Q5JT78 98 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 CYP2G1PQ6ZSU1 146 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 COA5Q86WW8 74 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 SRCAPQ6ZRS2 3230 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 HEATR5BQ9P2D3 2071 aa2.06□□□□□ -2.08
CCDC50-203ENST00000460064 FREM3P0C091 2139 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms