RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 GAGE5Q13069 117 aa11.68□□□□□ -0.54
TRIM39-211ENST00000458516 GAGE13Q4V321 117 aa11.68□□□□□ -0.54
TRIM39-211ENST00000458516 TMEM136Q6ZRR5 245 aa11.68□□□□□ -0.54
TRIM39-211ENST00000458516 FRZBQ92765 325 aa11.68□□□□□ -0.54
TRIM39-211ENST00000458516 SMCO4Q9NRQ5 59 aa11.68□□□□□ -0.54
TRIM39-211ENST00000458516 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
TRIM39-211ENST00000458516 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
TRIM39-211ENST00000458516 S100A1P23297 94 aa11.67□□□□□ -0.54
TRIM39-211ENST00000458516 MRPL51Q4U2R6 128 aaKnown RBP11.67□□□□□ -0.54
TRIM39-211ENST00000458516 MRAP2Q96G30 205 aa11.67□□□□□ -0.54
TRIM39-211ENST00000458516 ALMS1Q8TCU4 4167 aa11.67□□□□□ -0.54
TRIM39-211ENST00000458516 RPL36AP83881 106 aaKnown RBP11.66□□□□□ -0.54
TRIM39-211ENST00000458516 ZNRF2Q8NHG8 242 aa11.66□□□□□ -0.54
TRIM39-211ENST00000458516 RPL36ALQ969Q0 106 aaKnown RBP11.66□□□□□ -0.54
TRIM39-211ENST00000458516 RPL39LQ96EH5 51 aaKnown RBP11.66□□□□□ -0.54
TRIM39-211ENST00000458516 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 SMKR1H3BMG3 65 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 SCO1O75880 301 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 NCR2O95944 276 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 UBE2D3P61077 147 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 UBE2D2P62837 147 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 DNAJC30Q96LL9 226 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 NIT2Q9NQR4 276 aa11.65□□□□□ -0.54
TRIM39-211ENST00000458516 TENM2Q9NT68 2774 aa11.64□□□□□ -0.55
TRIM39-211ENST00000458516 RPS10P46783 165 aaKnown RBP11.64□□□□□ -0.55
TRIM39-211ENST00000458516 COX19Q49B96 90 aa11.64□□□□□ -0.55
TRIM39-211ENST00000458516 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
TRIM39-211ENST00000458516 GNB1LQ9BYB4 327 aa11.64□□□□□ -0.55
TRIM39-211ENST00000458516 DNAH1Q9P2D7 4330 aa11.63□□□□□ -0.55
TRIM39-211ENST00000458516 D6R8Y8 96 aa11.63□□□□□ -0.55
TRIM39-211ENST00000458516 HLA-DQA1P01909 254 aa11.63□□□□□ -0.55
TRIM39-211ENST00000458516 OR10J3Q5JRS4 329 aa11.63□□□□□ -0.55
TRIM39-211ENST00000458516 NRACQ8N912 160 aa11.63□□□□□ -0.55
TRIM39-211ENST00000458516 ATP6V0E2Q8NHE4 81 aa11.63□□□□□ -0.55
TRIM39-211ENST00000458516 TNFRSF18Q9Y5U5 241 aa11.63□□□□□ -0.55
TRIM39-211ENST00000458516 VPS13DQ5THJ4 4388 aa11.63□□□□□ -0.55
TRIM39-211ENST00000458516 CKS2P33552 79 aa11.62□□□□□ -0.55
TRIM39-211ENST00000458516 ESRGQ1W209 222 aa11.62□□□□□ -0.55
TRIM39-211ENST00000458516 TRBV6-5A0A0K0K1A5 114 aa11.61□□□□□ -0.55
TRIM39-211ENST00000458516 MT-ND6P03923 174 aa11.61□□□□□ -0.55
TRIM39-211ENST00000458516 LYPD5Q6UWN5 251 aa11.61□□□□□ -0.55
TRIM39-211ENST00000458516 LYSTQ99698 3801 aa11.61□□□□□ -0.55
TRIM39-211ENST00000458516 IGHV3-38A0A0C4DH36 116 aa11.6□□□□□ -0.55
TRIM39-211ENST00000458516 APCSP02743 223 aa11.6□□□□□ -0.55
TRIM39-211ENST00000458516 PPBPP02775 128 aa11.6□□□□□ -0.55
TRIM39-211ENST00000458516 TIRAPP58753 221 aa11.6□□□□□ -0.55
TRIM39-211ENST00000458516 ORMDL3Q8N138 153 aa11.6□□□□□ -0.55
TRIM39-211ENST00000458516 GTSF1LQ9H1H1 148 aa11.6□□□□□ -0.55
TRIM39-211ENST00000458516 LINC00588Q9Y4M8 146 aa11.6□□□□□ -0.55
TRIM39-211ENST00000458516 NPYP01303 97 aa11.59□□□□□ -0.55
TRIM39-211ENST00000458516 CCL18P55774 89 aa11.59□□□□□ -0.55
TRIM39-211ENST00000458516 KIAA1644Q3SXP7 199 aa11.59□□□□□ -0.55
TRIM39-211ENST00000458516 DAZ4Q86SG3 579 aaKnown RBP11.59□□□□□ -0.55
TRIM39-211ENST00000458516 MRPL18Q9H0U6 180 aaKnown RBP11.59□□□□□ -0.55
TRIM39-211ENST00000458516 DAZ3Q9NR90 486 aaKnown RBP11.59□□□□□ -0.55
TRIM39-211ENST00000458516 SDHAF1A6NFY7 115 aa11.58□□□□□ -0.56
TRIM39-211ENST00000458516 COLCA2A8K830 154 aa11.58□□□□□ -0.56
TRIM39-211ENST00000458516 TNFRSF6BO95407 300 aa11.58□□□□□ -0.56
TRIM39-211ENST00000458516 PPP1R17O96001 155 aa11.58□□□□□ -0.56
TRIM39-211ENST00000458516 LGALS9CQ6DKI2 356 aa11.58□□□□□ -0.56
TRIM39-211ENST00000458516 LINC00476Q8WZB0 136 aa11.58□□□□□ -0.56
TRIM39-211ENST00000458516 PRELID3AQ96N28 172 aa11.58□□□□□ -0.56
TRIM39-211ENST00000458516 ST20Q9HBF5 79 aa11.58□□□□□ -0.56
TRIM39-211ENST00000458516 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
TRIM39-211ENST00000458516 PHOX2AO14813 284 aa11.57□□□□□ -0.56
TRIM39-211ENST00000458516 POLR2KP53803 58 aaKnown RBP11.57□□□□□ -0.56
TRIM39-211ENST00000458516 UBE2DNLQ8IWF7 75 aa11.57□□□□□ -0.56
TRIM39-211ENST00000458516 TMEM70Q9BUB7 260 aa11.57□□□□□ -0.56
TRIM39-211ENST00000458516 TRAPPC1Q9Y5R8 145 aa11.57□□□□□ -0.56
TRIM39-211ENST00000458516 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
TRIM39-211ENST00000458516 FABP9Q0Z7S8 132 aa11.56□□□□□ -0.56
TRIM39-211ENST00000458516 LELP1Q5T871 98 aa11.56□□□□□ -0.56
TRIM39-211ENST00000458516 LAMTOR2Q9Y2Q5 125 aa11.56□□□□□ -0.56
TRIM39-211ENST00000458516 DNAH6Q9C0G6 4158 aa11.56□□□□□ -0.56
TRIM39-211ENST00000458516 SACSQ9NZJ4 4579 aa11.55□□□□□ -0.56
TRIM39-211ENST00000458516 NTM-AS1Q6ZSK4 140 aa11.55□□□□□ -0.56
TRIM39-211ENST00000458516 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-211ENST00000458516 C20orf78Q9BR46 151 aa11.55□□□□□ -0.56
TRIM39-211ENST00000458516 UPK3BQ9BT76 320 aa11.55□□□□□ -0.56
TRIM39-211ENST00000458516 TRBV27A0A0K0K1C4 114 aa11.54□□□□□ -0.56
TRIM39-211ENST00000458516 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
TRIM39-211ENST00000458516 DEFB104AQ8WTQ1 72 aa11.54□□□□□ -0.56
TRIM39-211ENST00000458516 TRBV6-8A0A0A6YYG3 113 aa11.53□□□□□ -0.56
TRIM39-211ENST00000458516 I3L3M4 83 aa11.53□□□□□ -0.56
TRIM39-211ENST00000458516 LY6G6CO95867 125 aa11.53□□□□□ -0.56
TRIM39-211ENST00000458516 RAB5AP20339 215 aa11.53□□□□□ -0.56
TRIM39-211ENST00000458516 TMEM97Q5BJF2 176 aa11.53□□□□□ -0.56
TRIM39-211ENST00000458516 ALKBH7Q9BT30 221 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-211ENST00000458516 SMIM2Q9BVW6 85 aa11.53□□□□□ -0.56
TRIM39-211ENST00000458516 PRSS47A8MTI9 375 aa11.52□□□□□ -0.57
TRIM39-211ENST00000458516 PMCHP20382 165 aa11.52□□□□□ -0.57
TRIM39-211ENST00000458516 COTL1Q14019 142 aa11.52□□□□□ -0.57
TRIM39-211ENST00000458516 WFDC10BQ8IUB3 73 aa11.52□□□□□ -0.57
TRIM39-211ENST00000458516 LCE6AA0A183 80 aa11.51□□□□□ -0.57
TRIM39-211ENST00000458516 VCYO14598 125 aa11.51□□□□□ -0.57
TRIM39-211ENST00000458516 TSHBP01222 138 aa11.51□□□□□ -0.57
TRIM39-211ENST00000458516 IQCJQ1A5X6 159 aa11.51□□□□□ -0.57
TRIM39-211ENST00000458516 MAP1LC3AQ9H492 121 aa11.51□□□□□ -0.57
TRIM39-211ENST00000458516 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms