RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 RFPL3SP0C7P2 107 aa4.13□□□□□ -1.75
HMGB4-202ENST00000458277 MIFP14174 115 aa4.13□□□□□ -1.75
HMGB4-202ENST00000458277 LYZP61626 148 aa4.13□□□□□ -1.75
HMGB4-202ENST00000458277 RNASE6Q93091 150 aaKnown RBP4.13□□□□□ -1.75
HMGB4-202ENST00000458277 CCL13Q99616 98 aa4.13□□□□□ -1.75
HMGB4-202ENST00000458277 PROK2Q9HC23 129 aa4.13□□□□□ -1.75
HMGB4-202ENST00000458277 MYOFQ9NZM1 2061 aa4.13□□□□□ -1.75
HMGB4-202ENST00000458277 EML6Q6ZMW3 1958 aa4.13□□□□□ -1.75
HMGB4-202ENST00000458277 IGHV4OR15-8A0A075B7B6 117 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 IGKV3D-15A0A087WSY6 115 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 A0A087WW49 117 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 IGHV1OR15-9A0A0B4J2B8 117 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 SAA1P0DJI8 122 aaPredicted RBP4.12□□□□□ -1.75
HMGB4-202ENST00000458277 CD28P10747 220 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 PDE6GP18545 87 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 APOC4P55056 127 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 TFF2Q03403 129 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 DEFB110Q30KQ9 67 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 RPL39P5Q59GN2 51 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 HIST2H2BCQ6DN03 193 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 HIST2H2BDQ6DRA6 164 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 Q6ZVQ6 151 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 PHF5AQ7RTV0 110 aaKnown RBP4.12□□□□□ -1.75
HMGB4-202ENST00000458277 DCTN5Q9BTE1 182 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 KRTAP1-5Q9BYS1 174 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 LINC00574Q9H8X3 128 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 RBM12B-AS1Q9P1G2 102 aa4.12□□□□□ -1.75
HMGB4-202ENST00000458277 TTC28Q96AY4 2481 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 IGHV3-43A0A0B4J1X8 118 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 IGHV5-51A0A0C4DH38 117 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 DEFB108AA8MXU0 73 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 SPRY2O43597 315 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 SAA2P0DJI9 122 aaPredicted RBP4.11□□□□□ -1.75
HMGB4-202ENST00000458277 IGHV3-43DP0DP04 118 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 Q8N2B8 174 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 C14orf178Q8N769 122 aaPredicted RBP4.11□□□□□ -1.75
HMGB4-202ENST00000458277 UBE2E2Q96LR5 201 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 KLK15Q9H2R5 256 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 ESM1Q9NQ30 184 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 LINC00846Q9NV44 126 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 MRPL36Q9P0J6 103 aaKnown RBP4.11□□□□□ -1.75
HMGB4-202ENST00000458277 SPRR3Q9UBC9 169 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 PHLDA3Q9Y5J5 127 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 C2orf16Q68DN1 1984 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 CUL9Q8IWT3 2517 aa4.11□□□□□ -1.75
HMGB4-202ENST00000458277 TRAV23DV6A0A075B6W5 121 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 IGHV1-18A0A0C4DH31 117 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 TRBV6-5A0A0K0K1A5 114 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 RPL28P46779 137 aaKnown RBP4.1□□□□□ -1.75
HMGB4-202ENST00000458277 UBE2AP49459 152 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 TSPEAR-AS2P59090 65 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 CXCL6P80162 114 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 ECSCRQ19T08 205 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 ATP11AUNQ6ZP68 121 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 DEFB126Q9BYW3 111 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 MSRB1Q9NZV6 116 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 NDUFA12Q9UI09 145 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 MYO7BQ6PIF6 2116 aa4.1□□□□□ -1.75
HMGB4-202ENST00000458277 IGLV3-12A0A075B6K2 115 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 TRBV12-3P01733 135 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 GRPP07492 148 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 PATE4P0C8F1 98 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 CGB3P0DN86 165 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 CGB7P0DN87 165 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 IGHV3-30-3P0DP02 117 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 FUSP35637 526 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB4-202ENST00000458277 RPL27AP46776 148 aaKnown RBP4.09□□□□□ -1.75
HMGB4-202ENST00000458277 WT1-ASQ06250 92 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 SS18Q15532 418 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 ZNF833PQ6ZTB9 187 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 LITAFQ99732 161 aa4.09□□□□□ -1.75
HMGB4-202ENST00000458277 A0A087WVE0 104 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 C10orf142B7Z368 130 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 E7EQL1 145 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 M0R378 163 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 LCA10Q71F78 164 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 C9orf106Q8NAJ2 232 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 RNF5Q99942 180 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 ORMDL1Q9P0S3 153 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 LINC00474Q9P2X8 69 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 CTSZQ9UBR2 303 aa4.08□□□□□ -1.76
HMGB4-202ENST00000458277 NCOR1O75376 2440 aa4.07□□□□□ -1.76
HMGB4-202ENST00000458277 IGHV3-15A0A0B4J1V0 119 aa4.07□□□□□ -1.76
HMGB4-202ENST00000458277 TRAV12-3A0A0B4J271 114 aa4.07□□□□□ -1.76
HMGB4-202ENST00000458277 IGHV5-10-1A0A0J9YXX1 117 aa4.07□□□□□ -1.76
HMGB4-202ENST00000458277 TMEM256-PLSCR3K7ERE1 68 aa4.07□□□□□ -1.76
HMGB4-202ENST00000458277 NDUFA1O15239 70 aa4.07□□□□□ -1.76
HMGB4-202ENST00000458277 S100A4P26447 101 aaKnown RBP4.07□□□□□ -1.76
HMGB4-202ENST00000458277 POLR2KP53803 58 aaKnown RBP4.07□□□□□ -1.76
HMGB4-202ENST00000458277 LINC00205P59089 165 aa4.07□□□□□ -1.76
HMGB4-202ENST00000458277 SERTAD4-AS1Q5TG53 156 aa4.07□□□□□ -1.76
HMGB4-202ENST00000458277 C17orf82Q86X59 251 aaPredicted RBP4.07□□□□□ -1.76
HMGB4-202ENST00000458277 SNRNP200O75643 2136 aaKnown RBP4.06□□□□□ -1.76
HMGB4-202ENST00000458277 TRAV21A0A0B4J279 112 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 IGHV7-4-1A0A0J9YVY3 117 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 SRRM5B3KS81 715 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 E7EUB6 86 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 ZNHIT1O43257 154 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms