RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 SPTBN5Q9NRC6 3674 aaKnown RBP12.38□□□□□ -0.43
LSS-205ENST00000457828 CCDC140Q96MF4 163 aa12.38□□□□□ -0.43
LSS-205ENST00000457828 TRAV8-4A0A0B4J246 113 aa12.38□□□□□ -0.43
LSS-205ENST00000457828 MRPS12O15235 138 aaKnown RBP12.38□□□□□ -0.43
LSS-205ENST00000457828 PLEKHB2Q96CS7 222 aa12.38□□□□□ -0.43
LSS-205ENST00000457828 JPT2Q9H910 190 aa12.38□□□□□ -0.43
LSS-205ENST00000457828 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.37□□□□□ -0.43
LSS-205ENST00000457828 RNASE13Q5GAN3 156 aaKnown RBP12.37□□□□□ -0.43
LSS-205ENST00000457828 UNQ9165/PRO28630Q6UXU0 137 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 Q6ZSV7 163 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 C11orf86A6NJI1 115 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 C9orf47Q6ZRZ4 202 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 MRPL53Q96EL3 112 aaKnown RBP12.37□□□□□ -0.43
LSS-205ENST00000457828 C2orf82Q6UX34 121 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 MAST4O15021 2626 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 M0R2P5 195 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 GATD1Q8NB37 220 aa12.37□□□□□ -0.43
LSS-205ENST00000457828 AKAP13Q12802 2813 aa12.36□□□□□ -0.43
LSS-205ENST00000457828 SLC25A20O43772 301 aa12.36□□□□□ -0.43
LSS-205ENST00000457828 TMEM141Q96I45 108 aa12.36□□□□□ -0.43
LSS-205ENST00000457828 SPANXB1Q9NS25 103 aaPredicted RBP12.36□□□□□ -0.43
LSS-205ENST00000457828 HHLA3Q9XRX5 114 aa12.36□□□□□ -0.43
LSS-205ENST00000457828 C19orf54Q5BKX5 351 aa12.36□□□□□ -0.43
LSS-205ENST00000457828 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
LSS-205ENST00000457828 TOMM6Q96B49 74 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 LENEPQ9Y5L5 61 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 TSPAN13O95857 204 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 C9orf66Q5T8R8 295 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 ZNF625Q96I27 306 aaPredicted RBP12.35□□□□□ -0.43
LSS-205ENST00000457828 ATXN8Q156A1 80 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 HIST2H2BDQ6DRA6 164 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 C16orf54Q6UWD8 224 aa12.35□□□□□ -0.43
LSS-205ENST00000457828 ZFP2Q6ZN57 461 aa12.34□□□□□ -0.43
LSS-205ENST00000457828 FOXI1Q12951 378 aa12.34□□□□□ -0.43
LSS-205ENST00000457828 SUMO4Q6EEV6 95 aa12.34□□□□□ -0.43
LSS-205ENST00000457828 C10orf99Q6UWK7 81 aa12.34□□□□□ -0.43
LSS-205ENST00000457828 RASL10AQ92737 203 aa12.34□□□□□ -0.43
LSS-205ENST00000457828 TRPT1Q86TN4 253 aaKnown RBP12.33□□□□□ -0.44
LSS-205ENST00000457828 APRG1Q8IVJ8 170 aa12.33□□□□□ -0.44
LSS-205ENST00000457828 IGHG4P01861 327 aa12.33□□□□□ -0.44
LSS-205ENST00000457828 EBI3Q14213 229 aa12.33□□□□□ -0.44
LSS-205ENST00000457828 ZFAND3Q9H8U3 227 aa12.33□□□□□ -0.44
LSS-205ENST00000457828 TOMM7Q9P0U1 55 aa12.33□□□□□ -0.44
LSS-205ENST00000457828 A4D1N5 150 aa12.33□□□□□ -0.44
LSS-205ENST00000457828 UBE2DNLQ8IWF7 75 aa12.33□□□□□ -0.44
LSS-205ENST00000457828 NTN5Q8WTR8 489 aaPredicted RBP12.33□□□□□ -0.44
LSS-205ENST00000457828 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
LSS-205ENST00000457828 INSL3P51460 131 aa12.32□□□□□ -0.44
LSS-205ENST00000457828 OPRPNQ99935 248 aaPredicted RBP12.32□□□□□ -0.44
LSS-205ENST00000457828 TMEM89A2RUT3 159 aa12.31□□□□□ -0.44
LSS-205ENST00000457828 NRACQ8N912 160 aa12.31□□□□□ -0.44
LSS-205ENST00000457828 APOC4P55056 127 aa12.31□□□□□ -0.44
LSS-205ENST00000457828 A0A0J9YXV3 536 aa12.31□□□□□ -0.44
LSS-205ENST00000457828 CFHR3Q02985 330 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 IGHV1OR15-1A0A075B7D0 117 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 TEN1Q86WV5 123 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 GPHB5Q86YW7 130 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 F8W735 103 aaPredicted RBP12.3□□□□□ -0.44
LSS-205ENST00000457828 CFC1BP0CG36 223 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 CFC1P0CG37 223 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 SCGB1A1P11684 91 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 HILS1P60008 231 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 C10orf126Q8N4M7 172 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 IGHV3-38A0A0C4DH36 116 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 I3L3M4 83 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
LSS-205ENST00000457828 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
LSS-205ENST00000457828 PRR9Q5T870 116 aa12.29□□□□□ -0.44
LSS-205ENST00000457828 C4orf3Q8WVX3 66 aa12.29□□□□□ -0.44
LSS-205ENST00000457828 Q6ZS46 218 aa12.29□□□□□ -0.44
LSS-205ENST00000457828 LINC01006Q8NI28 216 aa12.29□□□□□ -0.44
LSS-205ENST00000457828 NEXN-AS1Q8NBZ9 246 aa12.29□□□□□ -0.44
LSS-205ENST00000457828 NDUFA12Q9UI09 145 aa12.29□□□□□ -0.44
LSS-205ENST00000457828 FREM2Q5SZK8 3169 aa12.28□□□□□ -0.44
LSS-205ENST00000457828 ATRQ13535 2644 aa12.28□□□□□ -0.44
LSS-205ENST00000457828 TMEM61Q8N0U2 210 aa12.28□□□□□ -0.44
LSS-205ENST00000457828 TRAV26-1A0A087WT03 109 aa12.28□□□□□ -0.44
LSS-205ENST00000457828 ANKRD29Q8N6D5 301 aa12.28□□□□□ -0.44
LSS-205ENST00000457828 DNAL4O96015 105 aa12.27□□□□□ -0.44
LSS-205ENST00000457828 TMEM101Q96IK0 257 aa12.27□□□□□ -0.44
LSS-205ENST00000457828 CHD6Q8TD26 2715 aa12.27□□□□□ -0.45
LSS-205ENST00000457828 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.45
LSS-205ENST00000457828 CHCHD5Q9BSY4 110 aa12.27□□□□□ -0.45
LSS-205ENST00000457828 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
LSS-205ENST00000457828 OR13C6PQ8NH95 151 aa12.27□□□□□ -0.45
LSS-205ENST00000457828 MGAM2Q2M2H8 2515 aa12.27□□□□□ -0.45
LSS-205ENST00000457828 TRAV13-1A0A0B4J241 112 aa12.26□□□□□ -0.45
LSS-205ENST00000457828 RNASE1P07998 156 aaKnown RBP12.26□□□□□ -0.45
LSS-205ENST00000457828 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
LSS-205ENST00000457828 H3BMM0 161 aa12.26□□□□□ -0.45
LSS-205ENST00000457828 TCL1BO95988 128 aa12.26□□□□□ -0.45
LSS-205ENST00000457828 UBE2WQ96B02 151 aa12.26□□□□□ -0.45
LSS-205ENST00000457828 F5H768 121 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 DAD1P61803 113 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 ZFAND2AQ8N6M9 145 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 MT-ATP8P03928 68 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms