RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TRBV6-8A0A0A6YYG3 113 aa11.88□□□□□ -0.51
MSH6-207ENST00000456246 MUC21A0A0G2JKD1 596 aa11.88□□□□□ -0.51
MSH6-207ENST00000456246 MUC21A0A140T8X8 626 aa11.88□□□□□ -0.51
MSH6-207ENST00000456246 RAB19A4D1S5 217 aa11.88□□□□□ -0.51
MSH6-207ENST00000456246 F2Z2F3 143 aa11.88□□□□□ -0.51
MSH6-207ENST00000456246 H7C1H1 209 aa11.87□□□□□ -0.51
MSH6-207ENST00000456246 XGP55808 180 aa11.87□□□□□ -0.51
MSH6-207ENST00000456246 C9orf62Q8N4C0 152 aa11.87□□□□□ -0.51
MSH6-207ENST00000456246 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
MSH6-207ENST00000456246 TPPP3Q9BW30 176 aa11.87□□□□□ -0.51
MSH6-207ENST00000456246 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
MSH6-207ENST00000456246 TRBV20OR9-2A0A075B6H5 130 aa11.86□□□□□ -0.51
MSH6-207ENST00000456246 Q0VG73 95 aa11.86□□□□□ -0.51
MSH6-207ENST00000456246 KLK12Q9UKR0 248 aa11.86□□□□□ -0.51
MSH6-207ENST00000456246 EPM2AB3EWF7 344 aa11.85□□□□□ -0.51
MSH6-207ENST00000456246 GZMBP10144 247 aa11.85□□□□□ -0.51
MSH6-207ENST00000456246 SSTP61278 116 aa11.85□□□□□ -0.51
MSH6-207ENST00000456246 BLOC1S1P78537 153 aa11.85□□□□□ -0.51
MSH6-207ENST00000456246 UBE2WQ96B02 151 aa11.85□□□□□ -0.51
MSH6-207ENST00000456246 DNAJC30Q96LL9 226 aa11.85□□□□□ -0.51
MSH6-207ENST00000456246 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
MSH6-207ENST00000456246 TRGC1P0CF51 173 aa11.84□□□□□ -0.51
MSH6-207ENST00000456246 ATRAIDQ6UW56 229 aa11.84□□□□□ -0.51
MSH6-207ENST00000456246 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
MSH6-207ENST00000456246 WDR73Q6P4I2 378 aa11.83□□□□□ -0.52
MSH6-207ENST00000456246 FRZBQ92765 325 aa11.83□□□□□ -0.52
MSH6-207ENST00000456246 TMEM250H0YL14 139 aa11.82□□□□□ -0.52
MSH6-207ENST00000456246 CRPP02741 224 aa11.82□□□□□ -0.52
MSH6-207ENST00000456246 MGPP08493 103 aa11.82□□□□□ -0.52
MSH6-207ENST00000456246 Q8N976 141 aa11.82□□□□□ -0.52
MSH6-207ENST00000456246 CHCHD5Q9BSY4 110 aa11.82□□□□□ -0.52
MSH6-207ENST00000456246 hCG_2014768A0A024R1R8 64 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 TRBV25-1A0A075B6N4 114 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 M0QY20 66 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 CTRLP40313 264 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 WFDC2Q14508 124 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 LYZL1Q6UWQ5 148 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 ALKAL2Q6UX46 152 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 NUDT10Q8NFP7 164 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 NUDT11Q96G61 164 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 C1orf43Q9BWL3 253 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 DPH3P1Q9H4G8 78 aa11.81□□□□□ -0.52
MSH6-207ENST00000456246 SUMO4Q6EEV6 95 aa11.8□□□□□ -0.52
MSH6-207ENST00000456246 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
MSH6-207ENST00000456246 CNFNQ9BYD5 112 aa11.8□□□□□ -0.52
MSH6-207ENST00000456246 RPP21Q9H633 154 aaKnown RBP11.8□□□□□ -0.52
MSH6-207ENST00000456246 LECT2O14960 151 aa11.79□□□□□ -0.52
MSH6-207ENST00000456246 ANGP03950 147 aaKnown RBP11.79□□□□□ -0.52
MSH6-207ENST00000456246 NTF3P20783 257 aa11.79□□□□□ -0.52
MSH6-207ENST00000456246 IQCJQ1A5X6 159 aa11.79□□□□□ -0.52
MSH6-207ENST00000456246 MPV17L2Q567V2 206 aa11.79□□□□□ -0.52
MSH6-207ENST00000456246 RASL11AQ6T310 242 aa11.79□□□□□ -0.52
MSH6-207ENST00000456246 C15orf54Q8N8G6 183 aa11.79□□□□□ -0.52
MSH6-207ENST00000456246 LYPD6BQ8NI32 183 aa11.79□□□□□ -0.52
MSH6-207ENST00000456246 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
MSH6-207ENST00000456246 MIAQ16674 131 aa11.78□□□□□ -0.52
MSH6-207ENST00000456246 C14orf177Q52M58 125 aa11.78□□□□□ -0.52
MSH6-207ENST00000456246 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
MSH6-207ENST00000456246 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
MSH6-207ENST00000456246 NDUFS6O75380 124 aaKnown RBP11.77□□□□□ -0.53
MSH6-207ENST00000456246 Q5VSD8 79 aa11.77□□□□□ -0.53
MSH6-207ENST00000456246 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.76□□□□□ -0.53
MSH6-207ENST00000456246 FAM229AH3BQW9 127 aa11.76□□□□□ -0.53
MSH6-207ENST00000456246 K7EN84 100 aa11.76□□□□□ -0.53
MSH6-207ENST00000456246 TWIST1Q15672 202 aa11.76□□□□□ -0.53
MSH6-207ENST00000456246 ENHOQ6UWT2 76 aa11.76□□□□□ -0.53
MSH6-207ENST00000456246 PGLYRP4Q96LB8 373 aa11.76□□□□□ -0.53
MSH6-207ENST00000456246 RNASE7Q9H1E1 156 aaKnown RBP11.76□□□□□ -0.53
MSH6-207ENST00000456246 NIT2Q9NQR4 276 aa11.76□□□□□ -0.53
MSH6-207ENST00000456246 NKX2-5P52952 324 aaPredicted RBP11.75□□□□□ -0.53
MSH6-207ENST00000456246 RBX1P62877 108 aa11.75□□□□□ -0.53
MSH6-207ENST00000456246 Q6ZSA8 131 aa11.75□□□□□ -0.53
MSH6-207ENST00000456246 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
MSH6-207ENST00000456246 FAM231DQ6ZW35 169 aa11.74□□□□□ -0.53
MSH6-207ENST00000456246 SMIM15Q7Z3B0 74 aa11.74□□□□□ -0.53
MSH6-207ENST00000456246 A8MWL6 223 aa11.73□□□□□ -0.53
MSH6-207ENST00000456246 GAGE6Q13070 117 aa11.73□□□□□ -0.53
MSH6-207ENST00000456246 CT83Q5H943 113 aa11.73□□□□□ -0.53
MSH6-207ENST00000456246 TMEM243Q9BU79 118 aa11.73□□□□□ -0.53
MSH6-207ENST00000456246 GATCO43716 136 aaKnown RBP11.72□□□□□ -0.53
MSH6-207ENST00000456246 EIF5A2Q9GZV4 153 aaKnown RBP11.72□□□□□ -0.53
MSH6-207ENST00000456246 A0A1B0GUV1 79 aa11.71□□□□□ -0.53
MSH6-207ENST00000456246 SMR3BP02814 79 aaPredicted RBP11.71□□□□□ -0.53
MSH6-207ENST00000456246 INAFM2P0DMQ5 153 aa11.71□□□□□ -0.53
MSH6-207ENST00000456246 CEBPGP53567 150 aa11.71□□□□□ -0.53
MSH6-207ENST00000456246 COTL1Q14019 142 aa11.71□□□□□ -0.53
MSH6-207ENST00000456246 TEX261Q6UWH6 196 aa11.71□□□□□ -0.53
MSH6-207ENST00000456246 FAM30AQ9NZY2 134 aa11.71□□□□□ -0.53
MSH6-207ENST00000456246 FAT1Q14517 4588 aa11.7□□□□□ -0.54
MSH6-207ENST00000456246 HLA-DQA1P01909 254 aa11.7□□□□□ -0.54
MSH6-207ENST00000456246 HAMPP81172 84 aa11.7□□□□□ -0.54
MSH6-207ENST00000456246 LINC00269Q8N2A0 174 aa11.7□□□□□ -0.54
MSH6-207ENST00000456246 GTSF1Q8WW33 167 aa11.7□□□□□ -0.54
MSH6-207ENST00000456246 FAM210AQ96ND0 272 aa11.7□□□□□ -0.54
MSH6-207ENST00000456246 SMIM7Q9BQ49 75 aa11.7□□□□□ -0.54
MSH6-207ENST00000456246 UBE2L6O14933 153 aa11.69□□□□□ -0.54
MSH6-207ENST00000456246 BORCS7Q96B45 105 aa11.69□□□□□ -0.54
MSH6-207ENST00000456246 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
MSH6-207ENST00000456246 AMTP48728 403 aa11.68□□□□□ -0.54
MSH6-207ENST00000456246 FOXA3P55318 350 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms