RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PPDPFQ9H3Y8 114 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 U3KQK5 164 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 C5orf24Q7Z6I8 188 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 CHCHD7Q9BUK0 85 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 IGKV2D-26A0A0A0MRZ7 120 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 NSD1Q96L73 2696 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-204ENST00000455883 LOC107984640A0A0U1RRK4 108 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 C19orf71A6NCJ1 209 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 GNLYP22749 145 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 RPL18AQ02543 176 aaKnown RBP4.07□□□□□ -1.76
CSMD3-204ENST00000455883 KLHL30-AS1Q8NEE0 82 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 C4orf48Q5BLP8 95 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 B3GALT5-AS1P59052 145 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 CELA3BP08861 270 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 GPHA2Q96T91 129 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 IGLV11-55A0A075B6I3 123 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 LINC00474Q9P2X8 69 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 LY6EQ16553 131 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 LIMD2Q9BT23 127 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 A0A087WZ39 114 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 PRSS33Q8NF86 280 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 UBR5O95071 2799 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-204ENST00000455883 TRAV7A0A075B6U4 112 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 LINC01565O15544 149 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 Q8TAT8 98 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 TRAV12-2A0A075B6T6 113 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 SPART-AS1P0CW21 52 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV3-48P01763 117 aa4.06□□□□□ -1.76
CSMD3-204ENST00000455883 COLQQ9Y215 455 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-204ENST00000455883 IGKV1-6A0A0C4DH72 117 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 TRBV27A0A0K0K1C4 114 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 CD33P20138 364 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 ZMAT4Q9H898 229 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 PFN2P35080 140 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 BAALCQ8WXS3 180 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 LINC01548A6NM66 108 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 LINC01561Q8N1V8 128 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 C20orf203Q8NBC4 194 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 IGKV3-20P01619 116 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 TMEM61Q8N0U2 210 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 B9D2Q9BPU9 175 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 SPRR3Q9UBC9 169 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 ZNF580Q9UK33 172 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 FHL1Q13642 323 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 Q6JHZ5 121 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 UNQ6494/PRO21346Q6UXR6 183 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 CYYR1Q96J86 154 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV4-4A0A075B6R2 117 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV4OR15-8A0A075B7B6 117 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 A0A087WW49 117 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 COX7BP24311 80 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 TRBV6-5A0A0K0K1A5 114 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 FBXL19-AS1Q494R0 122 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 ANGP03950 147 aaKnown RBP4.05□□□□□ -1.76
CSMD3-204ENST00000455883 A0A087WWL8 130 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 C2orf70A6NJV1 201 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 CCL18P55774 89 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 CLPSP04118 112 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 LINC00526Q96FQ7 95 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 FAM167A-AS1Q96KT0 104 aa4.05□□□□□ -1.76
CSMD3-204ENST00000455883 ATP6V0E1O15342 81 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 GATA1P15976 413 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-204ENST00000455883 CELA2AP08217 269 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 FXYD7P58549 80 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 RPP25Q9BUL9 199 aaKnown RBP4.04□□□□□ -1.76
CSMD3-204ENST00000455883 TGFBR3LH3BV60 316 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 NDUFS5O43920 106 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 P0C879 139 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 C17orf58Q2M2W7 97 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 OVOL3O00110 214 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 ZNF726P1Q15940 193 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-204ENST00000455883 FAM27E3Q08E93 113 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 C9orf66Q5T8R8 295 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 NFE4Q86UQ8 179 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV3-64A0A075B6Q5 118 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 CSDC2Q9Y534 153 aaKnown RBP4.04□□□□□ -1.76
CSMD3-204ENST00000455883 PCP2Q8IVA1 136 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 H3BPC8 53 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 K7EIM0 57 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 LST1O00453 97 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 IGKV1-17P01599 117 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 BRI3O95415 125 aa4.04□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV3OR16-13A0A075B7E8 117 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV3-74A0A0B4J1X5 117 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 F5H768 121 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV3-30-3P0DP02 117 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 FAM30AQ9NZY2 134 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 NHLRC4P0CG21 123 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-204ENST00000455883 CFAP126Q5VTH2 177 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 LYPD6Q86Y78 171 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 ZNF837Q96EG3 531 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-204ENST00000455883 CAMK2N2Q96S95 79 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 IGKV3D-20A0A0C4DH25 116 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 K7ERJ3 54 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 FAM110AQ9BQ89 295 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV3-11P01762 117 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 FXYD2P54710 66 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms