RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 TCEAL7Q9BRU2 100 aa11.9□□□□□ -0.5
MSH6-206ENST00000455383 SSBP4Q9BWG4 385 aaPredicted RBP11.9□□□□□ -0.5
MSH6-206ENST00000455383 FHITP49789 147 aa11.89□□□□□ -0.51
MSH6-206ENST00000455383 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.89□□□□□ -0.51
MSH6-206ENST00000455383 BORCS7-ASMTA0A0B4J1R7 106 aa11.88□□□□□ -0.51
MSH6-206ENST00000455383 SNAI2O43623 268 aa11.88□□□□□ -0.51
MSH6-206ENST00000455383 CLPSL2Q6UWE3 100 aa11.88□□□□□ -0.51
MSH6-206ENST00000455383 ZNF471Q9BX82 626 aaPredicted RBP11.88□□□□□ -0.51
MSH6-206ENST00000455383 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
MSH6-206ENST00000455383 MAP1LC3B2A6NCE7 125 aa11.86□□□□□ -0.51
MSH6-206ENST00000455383 GAGE6Q13070 117 aa11.86□□□□□ -0.51
MSH6-206ENST00000455383 IQCJQ1A5X6 159 aa11.86□□□□□ -0.51
MSH6-206ENST00000455383 RNF185Q96GF1 192 aa11.86□□□□□ -0.51
MSH6-206ENST00000455383 DERL1Q9BUN8 251 aa11.86□□□□□ -0.51
MSH6-206ENST00000455383 MAP1LC3BQ9GZQ8 125 aa11.86□□□□□ -0.51
MSH6-206ENST00000455383 RNF213Q63HN8 5207 aa11.85□□□□□ -0.51
MSH6-206ENST00000455383 TRBV25-1A0A075B6N4 114 aa11.85□□□□□ -0.51
MSH6-206ENST00000455383 SLPIP03973 132 aa11.85□□□□□ -0.51
MSH6-206ENST00000455383 OR5AL1P0C617 328 aa11.85□□□□□ -0.51
MSH6-206ENST00000455383 AKR1C3P42330 323 aa11.85□□□□□ -0.51
MSH6-206ENST00000455383 AKR1C8PQ5T2L2 129 aa11.85□□□□□ -0.51
MSH6-206ENST00000455383 INO80EQ8NBZ0 244 aaPredicted RBP11.85□□□□□ -0.51
MSH6-206ENST00000455383 A0A087WYN8 130 aa11.84□□□□□ -0.51
MSH6-206ENST00000455383 A6NHS1 94 aa11.84□□□□□ -0.51
MSH6-206ENST00000455383 GIPP09681 153 aaPredicted RBP11.84□□□□□ -0.51
MSH6-206ENST00000455383 REG3AQ06141 175 aa11.84□□□□□ -0.51
MSH6-206ENST00000455383 MLST8Q9BVC4 326 aa11.84□□□□□ -0.51
MSH6-206ENST00000455383 MED28Q9H204 178 aa11.84□□□□□ -0.51
MSH6-206ENST00000455383 IGHV3-64A0A075B6Q5 118 aa11.83□□□□□ -0.52
MSH6-206ENST00000455383 F5H697 171 aa11.83□□□□□ -0.52
MSH6-206ENST00000455383 CST9LP1Q5W188 147 aa11.83□□□□□ -0.52
MSH6-206ENST00000455383 C20orf203Q8NBC4 194 aa11.83□□□□□ -0.52
MSH6-206ENST00000455383 SPACA4Q8TDM5 124 aa11.83□□□□□ -0.52
MSH6-206ENST00000455383 TRAV8-4A0A0B4J246 113 aa11.82□□□□□ -0.52
MSH6-206ENST00000455383 MUC21A0A0G2JKD1 596 aa11.82□□□□□ -0.52
MSH6-206ENST00000455383 MUC21A0A140T8X8 626 aa11.82□□□□□ -0.52
MSH6-206ENST00000455383 hDV102S1A0JD36 115 aa11.82□□□□□ -0.52
MSH6-206ENST00000455383 P01737 135 aa11.82□□□□□ -0.52
MSH6-206ENST00000455383 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
MSH6-206ENST00000455383 SPANXN1Q5VSR9 72 aa11.82□□□□□ -0.52
MSH6-206ENST00000455383 PLAC8Q9NZF1 115 aa11.82□□□□□ -0.52
MSH6-206ENST00000455383 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
MSH6-206ENST00000455383 IGHV1-24A0A0C4DH33 117 aa11.81□□□□□ -0.52
MSH6-206ENST00000455383 S100A9P06702 114 aaKnown RBP11.81□□□□□ -0.52
MSH6-206ENST00000455383 STOML3Q8TAV4 291 aa11.81□□□□□ -0.52
MSH6-206ENST00000455383 A0A1B0GUV1 79 aa11.8□□□□□ -0.52
MSH6-206ENST00000455383 CYTL1Q9NRR1 136 aa11.8□□□□□ -0.52
MSH6-206ENST00000455383 FXYD6-FXYD2A0A087WZ82 144 aa11.79□□□□□ -0.52
MSH6-206ENST00000455383 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.79□□□□□ -0.52
MSH6-206ENST00000455383 M0QY20 66 aa11.79□□□□□ -0.52
MSH6-206ENST00000455383 PAGE4O60829 102 aa11.79□□□□□ -0.52
MSH6-206ENST00000455383 GZMBP10144 247 aa11.79□□□□□ -0.52
MSH6-206ENST00000455383 GFRA4Q9GZZ7 299 aa11.79□□□□□ -0.52
MSH6-206ENST00000455383 AP5S1Q9NUS5 200 aa11.79□□□□□ -0.52
MSH6-206ENST00000455383 IGLV4-60A0A075B6I1 120 aa11.78□□□□□ -0.52
MSH6-206ENST00000455383 BAGE2Q86Y30 109 aa11.78□□□□□ -0.52
MSH6-206ENST00000455383 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
MSH6-206ENST00000455383 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
MSH6-206ENST00000455383 AP1S3Q96PC3 154 aa11.78□□□□□ -0.52
MSH6-206ENST00000455383 SCO2A0A1W2PP80 73 aa11.77□□□□□ -0.53
MSH6-206ENST00000455383 PHOX2AO14813 284 aa11.77□□□□□ -0.53
MSH6-206ENST00000455383 SMIM17P0DL12 118 aa11.77□□□□□ -0.53
MSH6-206ENST00000455383 G3V3Q6 166 aa11.76□□□□□ -0.53
MSH6-206ENST00000455383 SSTP61278 116 aa11.76□□□□□ -0.53
MSH6-206ENST00000455383 SUMO4Q6EEV6 95 aa11.75□□□□□ -0.53
MSH6-206ENST00000455383 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
MSH6-206ENST00000455383 MBD3L1Q8WWY6 194 aa11.75□□□□□ -0.53
MSH6-206ENST00000455383 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
MSH6-206ENST00000455383 H7C1H1 209 aa11.74□□□□□ -0.53
MSH6-206ENST00000455383 C15orf56Q8N910 161 aa11.74□□□□□ -0.53
MSH6-206ENST00000455383 PGLYRP4Q96LB8 373 aa11.74□□□□□ -0.53
MSH6-206ENST00000455383 IGLC6P0CF74 106 aa11.73□□□□□ -0.53
MSH6-206ENST00000455383 RAB5CP51148 216 aa11.73□□□□□ -0.53
MSH6-206ENST00000455383 MGPP08493 103 aa11.72□□□□□ -0.53
MSH6-206ENST00000455383 NKX2-5P52952 324 aaPredicted RBP11.72□□□□□ -0.53
MSH6-206ENST00000455383 PRR3P79522 188 aaKnown RBP11.72□□□□□ -0.53
MSH6-206ENST00000455383 TMUB2Q71RG4 321 aa11.72□□□□□ -0.53
MSH6-206ENST00000455383 DPH3P1Q9H4G8 78 aa11.72□□□□□ -0.53
MSH6-206ENST00000455383 COX6A2Q02221 97 aa11.71□□□□□ -0.53
MSH6-206ENST00000455383 SFT2D1Q8WV19 159 aa11.71□□□□□ -0.53
MSH6-206ENST00000455383 PFDN1O60925 122 aa11.7□□□□□ -0.54
MSH6-206ENST00000455383 NDUFS6O75380 124 aaKnown RBP11.7□□□□□ -0.54
MSH6-206ENST00000455383 RPS10P46783 165 aaKnown RBP11.7□□□□□ -0.54
MSH6-206ENST00000455383 KRTAP10-8P60410 259 aa11.7□□□□□ -0.54
MSH6-206ENST00000455383 ODF1Q14990 250 aa11.7□□□□□ -0.54
MSH6-206ENST00000455383 WDR73Q6P4I2 378 aa11.7□□□□□ -0.54
MSH6-206ENST00000455383 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
MSH6-206ENST00000455383 RASL11AQ6T310 242 aa11.7□□□□□ -0.54
MSH6-206ENST00000455383 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
MSH6-206ENST00000455383 PRSS3P2Q8NHM4 247 aa11.7□□□□□ -0.54
MSH6-206ENST00000455383 A0A0J9YXV3 536 aa11.69□□□□□ -0.54
MSH6-206ENST00000455383 ARPC5O15511 151 aa11.69□□□□□ -0.54
MSH6-206ENST00000455383 CACNG7P62955 275 aa11.69□□□□□ -0.54
MSH6-206ENST00000455383 NIT2Q9NQR4 276 aa11.69□□□□□ -0.54
MSH6-206ENST00000455383 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
MSH6-206ENST00000455383 RPL35P42766 123 aaKnown RBP11.68□□□□□ -0.54
MSH6-206ENST00000455383 MAJINQ3KP22 176 aa11.68□□□□□ -0.54
MSH6-206ENST00000455383 UMAD1C9J7I0 102 aa11.67□□□□□ -0.54
MSH6-206ENST00000455383 SULT1A2P50226 295 aa11.67□□□□□ -0.54
MSH6-206ENST00000455383 RPS20P60866 119 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms