RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 LENEPQ9Y5L5 61 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 IGLV7-46A0A075B6I9 117 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 TRAV8-4A0A0B4J246 113 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 C19orf71A6NCJ1 209 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 H7BYZ3 331 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 DUSP14O95147 198 aaKnown RBP3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 P01737 135 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 PFN1P07737 140 aaKnown RBP3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 INSL3P51460 131 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZNF80P51504 273 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 CMC4P56277 68 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 DEFB131AP59861 70 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 ERVFC1-1P60608 527 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 HIST1H1AQ02539 215 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 PYY3Q5JQD4 70 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 GDF5OSQ5U4N7 250 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 EBLN2Q6P2I7 272 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 C2orf66Q6UXQ4 117 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 FOXI2Q6ZQN5 318 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 FAM231DQ6ZW35 169 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 FAM19A4Q96LR4 140 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 YPEL4Q96NS1 127 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 NDFIP1Q9BT67 221 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 DHRS4-AS1Q9P1J3 65 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 V9GYV3 84 aa3.73□□□□□ -1.81
HMGB1P4-201ENST00000455362 A0A1B0GUV1 79 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 KNCNA6PVL3 124 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 COLCA2A8K830 154 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 A8MTW9 85 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 FABP5P3A8MUU1 101 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 H3BMM0 161 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 SH2D1AO60880 128 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 HLA-DRB4P13762 266 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 CRISP2P16562 243 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 IBA57Q5T440 356 aaKnown RBP3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 FAM162BQ5T6X4 162 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 AMTNQ6UX39 209 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 SMIM15Q7Z3B0 74 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZFAND2AQ8N6M9 145 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 CSNK1G2-AS1Q8NCQ2 148 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 ODF3Q96PU9 254 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 IMMP2LQ96T52 175 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 SNHG12Q9BXW3 62 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 HLA-DRB4X5D2U9 266 aa3.72□□□□□ -1.81
HMGB1P4-201ENST00000455362 SMIM27A0A1W2PRY6 76 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 ZNF705GA8MUZ8 300 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 A8MWL6 223 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 KLLNB2CW77 178 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 OR11H12B2RN74 326 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGKV3-20P01619 116 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 GPX1P07203 203 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 CD7P09564 240 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 TSPOP30536 169 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 RNASE4P34096 147 aaKnown RBP3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 PKIAP61925 76 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 KIAA0087Q14695 138 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 ELOBQ15370 118 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 PRR9Q5T870 116 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 Q6ZQT7 251 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 OR4B1Q8NGF8 309 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 OR2D3Q8NGH3 330 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 KIR2DL4Q99706 377 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 PYGO2Q9BRQ0 406 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 RPP21Q9H633 154 aaKnown RBP3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 IL36BQ9NZH7 164 aa3.71□□□□□ -1.82
HMGB1P4-201ENST00000455362 MUC4Q99102 2169 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 TRBV24-1A0A075B6N3 115 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 TGIF2-C20orf24A0A0A6YYL0 155 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 TINCRA0A1B0GVN0 87 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 TMEM189A5PLL7 270 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 ZNF324O75467 553 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 TYMSP04818 313 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 CXCL1P09341 107 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 GZMBP10144 247 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 FOXA3P55318 350 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 CACNG7P62955 275 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 RPL19P84098 196 aaKnown RBP3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 PRR4Q16378 134 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 Q6AWC8 147 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 NKAPP1Q8N9T2 125 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 TSKUQ8WUA8 353 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 GTSF1Q8WW33 167 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 GFRA4Q9GZZ7 299 aa3.7□□□□□ -1.82
HMGB1P4-201ENST00000455362 TRAV12-2A0A075B6T6 113 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 TRAV9-1A0A075B6T8 112 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 A0A087X002 238 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 TMSB15BA0A087X1C1 80 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 TRAV12-3A0A0B4J271 114 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 TRAV21A0A0B4J279 112 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGKV3D-20A0A0C4DH25 116 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 C7orf71A4D174 169 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 M0R2Z0 102 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 TCL1AP56279 114 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 RPS20P60866 119 aaKnown RBP3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 SPINK13Q1W4C9 94 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 GFI1BQ5VTD9 330 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 DEFB125Q8N687 156 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 NUP35Q8NFH5 326 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms