RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PRR9Q5T870 116 aa8.52□□□□□ -1.05
DDR1-240ENST00000454612 RS1O15537 224 aa8.52□□□□□ -1.05
DDR1-240ENST00000454612 CFHR3Q02985 330 aa8.52□□□□□ -1.05
DDR1-240ENST00000454612 DPH3P1Q9H4G8 78 aa8.52□□□□□ -1.05
DDR1-240ENST00000454612 XCL2Q9UBD3 114 aa8.52□□□□□ -1.05
DDR1-240ENST00000454612 ITPR3Q14573 2671 aa8.52□□□□□ -1.05
DDR1-240ENST00000454612 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
DDR1-240ENST00000454612 TEX15Q9BXT5 2789 aa8.51□□□□□ -1.05
DDR1-240ENST00000454612 SPXQ9BT56 116 aa8.51□□□□□ -1.05
DDR1-240ENST00000454612 AVPP01185 164 aa8.51□□□□□ -1.05
DDR1-240ENST00000454612 TEN1Q86WV5 123 aa8.51□□□□□ -1.05
DDR1-240ENST00000454612 SMPXQ9UHP9 88 aa8.51□□□□□ -1.05
DDR1-240ENST00000454612 OVOL1O14753 267 aa8.5□□□□□ -1.05
DDR1-240ENST00000454612 DUSP14O95147 198 aaKnown RBP8.5□□□□□ -1.05
DDR1-240ENST00000454612 APRG1Q8IVJ8 170 aa8.5□□□□□ -1.05
DDR1-240ENST00000454612 M0QXV9 152 aa8.5□□□□□ -1.05
DDR1-240ENST00000454612 FGF6P10767 208 aa8.5□□□□□ -1.05
DDR1-240ENST00000454612 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 NDUFV3P56181 108 aaKnown RBP8.49□□□□□ -1.05
DDR1-240ENST00000454612 C11orf71Q6IPW1 123 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 SLURP1P55000 103 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 Q8N8P6 123 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 TNFRSF18Q9Y5U5 241 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 NBEAL2Q6ZNJ1 2754 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 GAGE2AQ6NT46 116 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 SMIM2Q9BVW6 85 aa8.49□□□□□ -1.05
DDR1-240ENST00000454612 TRAV8-3A0A0A6YYJ7 113 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 SPATA25Q9BR10 227 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 ZFAND3Q9H8U3 227 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 NF1P21359 2839 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 MYMXA0A1B0GTQ4 84 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 ZFP2Q6ZN57 461 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 PRADC1Q9BSG0 188 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 C1orf43Q9BWL3 253 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 P0DMU3 169 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 FAM231AP0DMU4 169 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 FAM231CP0DMU5 169 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 RPL35AP18077 110 aaKnown RBP8.48□□□□□ -1.05
DDR1-240ENST00000454612 ORMDL2Q53FV1 153 aa8.48□□□□□ -1.05
DDR1-240ENST00000454612 HRNRQ86YZ3 2850 aaPredicted RBP8.47□□□□□ -1.05
DDR1-240ENST00000454612 IGHV7-4-1A0A0J9YVY3 117 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 PLNP26678 52 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 CEMP1Q6PRD7 247 aaPredicted RBP8.47□□□□□ -1.05
DDR1-240ENST00000454612 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 FAM223BA6NKX1 122 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 H7C1H1 209 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 FAM223AQ8IWN6 122 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 H3BMM0 161 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 MRPS12O15235 138 aaKnown RBP8.47□□□□□ -1.05
DDR1-240ENST00000454612 NSUN5P1Q3KNT7 163 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 UBE2WQ96B02 151 aa8.47□□□□□ -1.05
DDR1-240ENST00000454612 CLPSL1A2RUU4 121 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 E9PLD3 99 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 NDUFA4O00483 81 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 HELZ2Q9BYK8 2649 aaKnown RBP8.46□□□□□ -1.06
DDR1-240ENST00000454612 CD28P10747 220 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 ODF1Q14990 250 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 MAPKAPK5-AS1Q8N8E1 139 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 C10orf105Q8TEF2 133 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 USMG5Q96IX5 58 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 Q96MF0 132 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
DDR1-240ENST00000454612 FBN2P35556 2912 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 J3QKU1 62 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 SRSF2Q01130 221 aaKnown RBP8.45□□□□□ -1.06
DDR1-240ENST00000454612 C18orf65Q6ZTR6 163 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 MUC4Q99102 2169 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 FAM236AA0A1B0GUQ0 79 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 FAM236BA0A1B0GV22 79 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 IGHG4P01861 327 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 RNASE1P07998 156 aaKnown RBP8.45□□□□□ -1.06
DDR1-240ENST00000454612 IGLC6P0CF74 106 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 ATXN8Q156A1 80 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 A0A096LNJ9 63 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 GATD1Q8NB37 220 aa8.45□□□□□ -1.06
DDR1-240ENST00000454612 TRGV1A0A0A0MS02 117 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 HOXD3P31249 432 aaPredicted RBP8.44□□□□□ -1.06
DDR1-240ENST00000454612 ZFHX3Q15911 3703 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 IGHV4OR15-8A0A075B7B6 117 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 A0A087WW49 117 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 C11orf68Q9H3H3 251 aaKnown RBP8.44□□□□□ -1.06
DDR1-240ENST00000454612 ATRQ13535 2644 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
DDR1-240ENST00000454612 PROK1P58294 105 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 LINC01559Q495D7 138 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 Q8N1Y9 231 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
DDR1-240ENST00000454612 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
DDR1-240ENST00000454612 SPANXA1Q9NS26 97 aa8.43□□□□□ -1.06
DDR1-240ENST00000454612 TRAV4A0A0B4J268 109 aa8.43□□□□□ -1.06
DDR1-240ENST00000454612 Q8N6K4 173 aa8.43□□□□□ -1.06
DDR1-240ENST00000454612 F8VRH5 84 aa8.43□□□□□ -1.06
DDR1-240ENST00000454612 TAL2Q16559 108 aa8.43□□□□□ -1.06
DDR1-240ENST00000454612 LINC01356Q8N9X3 169 aa8.42□□□□□ -1.06
DDR1-240ENST00000454612 TRGV2A0A075B6R0 118 aa8.42□□□□□ -1.06
DDR1-240ENST00000454612 VCYO14598 125 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms