RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 LINC00269Q8N2A0 174 aa15.29■□□□□ 0.04
LYSMD2-202ENST00000454181 DERL1Q9BUN8 251 aa15.29■□□□□ 0.04
LYSMD2-202ENST00000454181 CXCL1P09341 107 aa15.28■□□□□ 0.04
LYSMD2-202ENST00000454181 SSTP61278 116 aa15.28■□□□□ 0.04
LYSMD2-202ENST00000454181 RBX1P62877 108 aa15.28■□□□□ 0.04
LYSMD2-202ENST00000454181 TRBV25-1A0A075B6N4 114 aa15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 A0A0D9SG52 128 aa15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 MUC21A0A0G2JKD1 596 aa15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 MUC21A0A140T8X8 626 aa15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 PAGE4O60829 102 aa15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 HNRNPA3P51991 378 aaKnown RBP15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 CLRN3Q8NCR9 226 aa15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 DPH3Q96FX2 82 aa15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 PRR34Q9NV39 138 aa15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.27■□□□□ 0.04
LYSMD2-202ENST00000454181 NTM-AS1Q6ZSK4 140 aa15.26■□□□□ 0.03
LYSMD2-202ENST00000454181 OR5AL1P0C617 328 aa15.25■□□□□ 0.03
LYSMD2-202ENST00000454181 BAGE2Q86Y30 109 aa15.25■□□□□ 0.03
LYSMD2-202ENST00000454181 VAX2Q9UIW0 290 aa15.25■□□□□ 0.03
LYSMD2-202ENST00000454181 SNAI2O43623 268 aa15.24■□□□□ 0.03
LYSMD2-202ENST00000454181 PFDN1O60925 122 aa15.24■□□□□ 0.03
LYSMD2-202ENST00000454181 SDIM1Q6ZPB5 146 aa15.24■□□□□ 0.03
LYSMD2-202ENST00000454181 SSBP4Q9BWG4 385 aaPredicted RBP15.24■□□□□ 0.03
LYSMD2-202ENST00000454181 UBR4Q5T4S7 5183 aa15.23■□□□□ 0.03
LYSMD2-202ENST00000454181 AP1S3Q96PC3 154 aa15.23■□□□□ 0.03
LYSMD2-202ENST00000454181 IGHV1-24A0A0C4DH33 117 aa15.22■□□□□ 0.03
LYSMD2-202ENST00000454181 hDV102S1A0JD36 115 aa15.22■□□□□ 0.03
LYSMD2-202ENST00000454181 ARPC5O15511 151 aa15.22■□□□□ 0.03
LYSMD2-202ENST00000454181 SFT2D1Q8WV19 159 aa15.22■□□□□ 0.03
LYSMD2-202ENST00000454181 AP5S1Q9NUS5 200 aa15.22■□□□□ 0.03
LYSMD2-202ENST00000454181 IGLV10-54A0A075B6I4 117 aa15.21■□□□□ 0.03
LYSMD2-202ENST00000454181 REG3AQ06141 175 aa15.21■□□□□ 0.03
LYSMD2-202ENST00000454181 KRTAP26-1Q6PEX3 210 aa15.21■□□□□ 0.03
LYSMD2-202ENST00000454181 Q6ZRU5 148 aa15.21■□□□□ 0.03
LYSMD2-202ENST00000454181 SCO2A0A1W2PP80 73 aa15.2■□□□□ 0.02
LYSMD2-202ENST00000454181 PANO1I0J062 215 aa15.2■□□□□ 0.02
LYSMD2-202ENST00000454181 IQCJQ1A5X6 159 aa15.2■□□□□ 0.02
LYSMD2-202ENST00000454181 MLST8Q9BVC4 326 aa15.2■□□□□ 0.02
LYSMD2-202ENST00000454181 CYTL1Q9NRR1 136 aa15.2■□□□□ 0.02
LYSMD2-202ENST00000454181 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.19■□□□□ 0.02
LYSMD2-202ENST00000454181 A0A1B0GV50 99 aa15.19■□□□□ 0.02
LYSMD2-202ENST00000454181 H7C1H1 209 aa15.19■□□□□ 0.02
LYSMD2-202ENST00000454181 MGPP08493 103 aa15.19■□□□□ 0.02
LYSMD2-202ENST00000454181 IGHV3-64A0A075B6Q5 118 aa15.18■□□□□ 0.02
LYSMD2-202ENST00000454181 TRAV8-4A0A0B4J246 113 aa15.18■□□□□ 0.02
LYSMD2-202ENST00000454181 P01737 135 aa15.18■□□□□ 0.02
LYSMD2-202ENST00000454181 CNBPP62633 177 aaKnown RBP15.18■□□□□ 0.02
LYSMD2-202ENST00000454181 FAM213BQ8TBF2 198 aa15.18■□□□□ 0.02
LYSMD2-202ENST00000454181 KIF25-AS1Q9Y6Z4 181 aa15.18■□□□□ 0.02
LYSMD2-202ENST00000454181 TPPP3Q9BW30 176 aa15.17■□□□□ 0.02
LYSMD2-202ENST00000454181 TMUB2Q71RG4 321 aa15.16■□□□□ 0.02
LYSMD2-202ENST00000454181 UMAD1C9J7I0 102 aa15.15■□□□□ 0.02
LYSMD2-202ENST00000454181 MBD3L1Q8WWY6 194 aa15.15■□□□□ 0.02
LYSMD2-202ENST00000454181 RNF185Q96GF1 192 aa15.15■□□□□ 0.02
LYSMD2-202ENST00000454181 TMEM243Q9BU79 118 aa15.15■□□□□ 0.02
LYSMD2-202ENST00000454181 DPH3P1Q9H4G8 78 aa15.15■□□□□ 0.02
LYSMD2-202ENST00000454181 PKHD1L1Q86WI1 4243 aa15.15■□□□□ 0.02
LYSMD2-202ENST00000454181 M0QY20 66 aa15.14■□□□□ 0.01
LYSMD2-202ENST00000454181 MT1HL1P0DM35 61 aa15.14■□□□□ 0.01
LYSMD2-202ENST00000454181 RAB5CP51148 216 aa15.14■□□□□ 0.01
LYSMD2-202ENST00000454181 KCNRGQ8N5I3 272 aa15.14■□□□□ 0.01
LYSMD2-202ENST00000454181 GZMBP10144 247 aa15.13■□□□□ 0.01
LYSMD2-202ENST00000454181 CIRBPQ14011 172 aaKnown RBP15.13■□□□□ 0.01
LYSMD2-202ENST00000454181 C20orf203Q8NBC4 194 aa15.13■□□□□ 0.01
LYSMD2-202ENST00000454181 A0A087WYN8 130 aa15.12■□□□□ 0.01
LYSMD2-202ENST00000454181 A0A1B0GUV1 79 aa15.12■□□□□ 0.01
LYSMD2-202ENST00000454181 UBE2L6O14933 153 aa15.12■□□□□ 0.01
LYSMD2-202ENST00000454181 NKX2-5P52952 324 aaPredicted RBP15.12■□□□□ 0.01
LYSMD2-202ENST00000454181 WDR73Q6P4I2 378 aa15.12■□□□□ 0.01
LYSMD2-202ENST00000454181 FER1L6-AS1Q8NA97 138 aa15.12■□□□□ 0.01
LYSMD2-202ENST00000454181 G3V3Q6 166 aa15.11■□□□□ 0.01
LYSMD2-202ENST00000454181 RPL35P42766 123 aaKnown RBP15.11■□□□□ 0.01
LYSMD2-202ENST00000454181 RPS20P60866 119 aaKnown RBP15.11■□□□□ 0.01
LYSMD2-202ENST00000454181 SUMO4Q6EEV6 95 aa15.11■□□□□ 0.01
LYSMD2-202ENST00000454181 H2AFB1P0C5Y9 115 aa15.1■□□□□ 0.01
LYSMD2-202ENST00000454181 SULT1A2P50226 295 aa15.1■□□□□ 0.01
LYSMD2-202ENST00000454181 CACNG7P62955 275 aa15.1■□□□□ 0.01
LYSMD2-202ENST00000454181 RASL11AQ6T310 242 aa15.1■□□□□ 0.01
LYSMD2-202ENST00000454181 C7orf33Q8WU49 177 aa15.1■□□□□ 0.01
LYSMD2-202ENST00000454181 IGLV4-60A0A075B6I1 120 aa15.09■□□□□ 0.01
LYSMD2-202ENST00000454181 CHTF8P0CG12 524 aa15.09■□□□□ 0.01
LYSMD2-202ENST00000454181 CFAP161Q6P656 301 aa15.09■□□□□ 0.01
LYSMD2-202ENST00000454181 OR2D3Q8NGH3 330 aa15.09■□□□□ 0.01
LYSMD2-202ENST00000454181 BATF3Q9NR55 127 aa15.09■□□□□ 0.01
LYSMD2-202ENST00000454181 XKRY2A2RUG3 117 aa15.07■□□□□ 0
LYSMD2-202ENST00000454181 SPACA4Q8TDM5 124 aa15.07■□□□□ 0
LYSMD2-202ENST00000454181 SLPIP03973 132 aa15.06■□□□□ 0
LYSMD2-202ENST00000454181 TRGC1P0CF51 173 aa15.06■□□□□ 0
LYSMD2-202ENST00000454181 IGLC6P0CF74 106 aa15.06■□□□□ 0
LYSMD2-202ENST00000454181 ZNF345Q14585 488 aa15.06■□□□□ 0
LYSMD2-202ENST00000454181 PGLYRP4Q96LB8 373 aa15.06■□□□□ 0
LYSMD2-202ENST00000454181 GFRA4Q9GZZ7 299 aa15.06■□□□□ 0
LYSMD2-202ENST00000454181 NIT2Q9NQR4 276 aa15.06■□□□□ 0
LYSMD2-202ENST00000454181 F2Z2F3 143 aa15.05■□□□□ -0
LYSMD2-202ENST00000454181 SMLR1H3BR10 107 aa15.05■□□□□ -0
LYSMD2-202ENST00000454181 AMTP48728 403 aa15.05■□□□□ -0
LYSMD2-202ENST00000454181 COTL1Q14019 142 aa15.05■□□□□ -0
LYSMD2-202ENST00000454181 CENPWQ5EE01 88 aa15.05■□□□□ -0
LYSMD2-202ENST00000454181 KANTRA0A1W2PQU2 76 aa15.04■□□□□ -0
LYSMD2-202ENST00000454181 MANBALQ9NQG1 85 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 250.7 ms