RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 TRBV24-1A0A075B6N3 115 aa10.04□□□□□ -0.8
LAMA4-209ENST00000453937 S100A8P05109 93 aa10.04□□□□□ -0.8
LAMA4-209ENST00000453937 S100PP25815 95 aa10.04□□□□□ -0.8
LAMA4-209ENST00000453937 MRPL51Q4U2R6 128 aaKnown RBP10.04□□□□□ -0.8
LAMA4-209ENST00000453937 TMEM136Q6ZRR5 245 aa10.04□□□□□ -0.8
LAMA4-209ENST00000453937 ALMS1Q8TCU4 4167 aa10.04□□□□□ -0.8
LAMA4-209ENST00000453937 GAGE12JA6NER3 117 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 UBE2D3P61077 147 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 UBE2D2P62837 147 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 GAGE1Q13065 139 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 GAGE4Q13068 117 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 GAGE5Q13069 117 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 ESRGQ1W209 222 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 GAGE13Q4V321 117 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 CBLN2Q8IUK8 224 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 MRAP2Q96G30 205 aa10.03□□□□□ -0.8
LAMA4-209ENST00000453937 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 H7C1H1 209 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 ATP6V1G1O75348 118 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 SRIP30626 198 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 RPS10P46783 165 aaKnown RBP10.02□□□□□ -0.81
LAMA4-209ENST00000453937 TIRAPP58753 221 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 NEGR1Q7Z3B1 354 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 NRACQ8N912 160 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.81
LAMA4-209ENST00000453937 DNAJC30Q96LL9 226 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 LYSTQ99698 3801 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 NIT2Q9NQR4 276 aa10.02□□□□□ -0.81
LAMA4-209ENST00000453937 TRBV6-5A0A0K0K1A5 114 aa10.01□□□□□ -0.81
LAMA4-209ENST00000453937 SMKR1H3BMG3 65 aa10.01□□□□□ -0.81
LAMA4-209ENST00000453937 RPL36AP83881 106 aaKnown RBP10.01□□□□□ -0.81
LAMA4-209ENST00000453937 LGALS9CQ6DKI2 356 aa10.01□□□□□ -0.81
LAMA4-209ENST00000453937 LYPD5Q6UWN5 251 aa10.01□□□□□ -0.81
LAMA4-209ENST00000453937 SH2D6Q7Z4S9 175 aa10.01□□□□□ -0.81
LAMA4-209ENST00000453937 RPL36ALQ969Q0 106 aaKnown RBP10.01□□□□□ -0.81
LAMA4-209ENST00000453937 SMCO4Q9NRQ5 59 aa10.01□□□□□ -0.81
LAMA4-209ENST00000453937 LINC00588Q9Y4M8 146 aa10.01□□□□□ -0.81
LAMA4-209ENST00000453937 ATP6V0E2Q8NHE4 81 aa10□□□□□ -0.81
LAMA4-209ENST00000453937 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
LAMA4-209ENST00000453937 GNB1LQ9BYB4 327 aa10□□□□□ -0.81
LAMA4-209ENST00000453937 NCR2O95944 276 aa9.99□□□□□ -0.81
LAMA4-209ENST00000453937 SCO1O75880 301 aa9.98□□□□□ -0.81
LAMA4-209ENST00000453937 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
LAMA4-209ENST00000453937 COX19Q49B96 90 aa9.98□□□□□ -0.81
LAMA4-209ENST00000453937 GTSF1LQ9H1H1 148 aa9.98□□□□□ -0.81
LAMA4-209ENST00000453937 MRPS16Q9Y3D3 137 aaKnown RBP9.98□□□□□ -0.81
LAMA4-209ENST00000453937 D6R8Y8 96 aa9.97□□□□□ -0.81
LAMA4-209ENST00000453937 HLA-DQA1P01909 254 aa9.97□□□□□ -0.81
LAMA4-209ENST00000453937 PPBPP02775 128 aa9.97□□□□□ -0.81
LAMA4-209ENST00000453937 S100A1P23297 94 aa9.97□□□□□ -0.81
LAMA4-209ENST00000453937 NTM-AS1Q6ZSK4 140 aa9.97□□□□□ -0.81
LAMA4-209ENST00000453937 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
LAMA4-209ENST00000453937 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
LAMA4-209ENST00000453937 LCE6AA0A183 80 aa9.96□□□□□ -0.82
LAMA4-209ENST00000453937 COLCA2A8K830 154 aa9.96□□□□□ -0.82
LAMA4-209ENST00000453937 NPYP01303 97 aa9.96□□□□□ -0.82
LAMA4-209ENST00000453937 CKS2P33552 79 aa9.96□□□□□ -0.82
LAMA4-209ENST00000453937 CCL18P55774 89 aa9.96□□□□□ -0.82
LAMA4-209ENST00000453937 OR10J3Q5JRS4 329 aa9.96□□□□□ -0.82
LAMA4-209ENST00000453937 DAZ4Q86SG3 579 aaKnown RBP9.96□□□□□ -0.82
LAMA4-209ENST00000453937 TMEM70Q9BUB7 260 aa9.96□□□□□ -0.82
LAMA4-209ENST00000453937 DAZ3Q9NR90 486 aaKnown RBP9.96□□□□□ -0.82
LAMA4-209ENST00000453937 IGHV3-38A0A0C4DH36 116 aa9.95□□□□□ -0.82
LAMA4-209ENST00000453937 SDHAF1A6NFY7 115 aa9.95□□□□□ -0.82
LAMA4-209ENST00000453937 PRSS47A8MTI9 375 aa9.95□□□□□ -0.82
LAMA4-209ENST00000453937 PHOX2AO14813 284 aa9.95□□□□□ -0.82
LAMA4-209ENST00000453937 TNFRSF6BO95407 300 aa9.95□□□□□ -0.82
LAMA4-209ENST00000453937 MT-ND6P03923 174 aa9.95□□□□□ -0.82
LAMA4-209ENST00000453937 RPL32P62910 135 aaKnown RBP9.95□□□□□ -0.82
LAMA4-209ENST00000453937 LELP1Q5T871 98 aa9.95□□□□□ -0.82
LAMA4-209ENST00000453937 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
LAMA4-209ENST00000453937 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
LAMA4-209ENST00000453937 PPP1R17O96001 155 aa9.94□□□□□ -0.82
LAMA4-209ENST00000453937 APCSP02743 223 aa9.94□□□□□ -0.82
LAMA4-209ENST00000453937 PRELID3AQ96N28 172 aa9.94□□□□□ -0.82
LAMA4-209ENST00000453937 C20orf78Q9BR46 151 aa9.94□□□□□ -0.82
LAMA4-209ENST00000453937 MRPL18Q9H0U6 180 aaKnown RBP9.94□□□□□ -0.82
LAMA4-209ENST00000453937 ST20Q9HBF5 79 aa9.94□□□□□ -0.82
LAMA4-209ENST00000453937 DNAH6Q9C0G6 4158 aa9.93□□□□□ -0.82
LAMA4-209ENST00000453937 TRBV6-8A0A0A6YYG3 113 aa9.93□□□□□ -0.82
LAMA4-209ENST00000453937 SUMO2P61956 95 aaKnown RBP9.93□□□□□ -0.82
LAMA4-209ENST00000453937 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
LAMA4-209ENST00000453937 LAMTOR2Q9Y2Q5 125 aa9.93□□□□□ -0.82
LAMA4-209ENST00000453937 IGLV2-18A0A075B6J9 118 aa9.92□□□□□ -0.82
LAMA4-209ENST00000453937 LY6G6CO95867 125 aa9.92□□□□□ -0.82
LAMA4-209ENST00000453937 TSHBP01222 138 aa9.92□□□□□ -0.82
LAMA4-209ENST00000453937 WFDC10BQ8IUB3 73 aa9.92□□□□□ -0.82
LAMA4-209ENST00000453937 ALKBH7Q9BT30 221 aaPredicted RBP9.92□□□□□ -0.82
LAMA4-209ENST00000453937 IQCJQ1A5X6 159 aa9.91□□□□□ -0.82
LAMA4-209ENST00000453937 I3L3M4 83 aa9.9□□□□□ -0.82
LAMA4-209ENST00000453937 VCYO14598 125 aa9.9□□□□□ -0.82
LAMA4-209ENST00000453937 FABP9Q0Z7S8 132 aa9.9□□□□□ -0.82
LAMA4-209ENST00000453937 TMEM97Q5BJF2 176 aa9.9□□□□□ -0.82
LAMA4-209ENST00000453937 UBE2DNLQ8IWF7 75 aa9.9□□□□□ -0.82
LAMA4-209ENST00000453937 DEFB104AQ8WTQ1 72 aa9.9□□□□□ -0.82
LAMA4-209ENST00000453937 SMIM2Q9BVW6 85 aa9.9□□□□□ -0.82
LAMA4-209ENST00000453937 Q9H8V8 135 aa9.9□□□□□ -0.82
LAMA4-209ENST00000453937 TRAPPC1Q9Y5R8 145 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms