RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 USP24Q9UPU5 2620 aa15.52■□□□□ 0.07
PUF60-203ENST00000453551 TMEM238LA0A1B0GVL6 79 aa15.52■□□□□ 0.07
PUF60-203ENST00000453551 A6NJY4 79 aa15.52■□□□□ 0.07
PUF60-203ENST00000453551 SCGB2A2Q13296 93 aa15.52■□□□□ 0.07
PUF60-203ENST00000453551 RRN3P1Q2M238 152 aa15.52■□□□□ 0.07
PUF60-203ENST00000453551 DEFB114Q30KQ6 69 aa15.52■□□□□ 0.07
PUF60-203ENST00000453551 ZNRF2Q8NHG8 242 aa15.52■□□□□ 0.07
PUF60-203ENST00000453551 DLX4Q92988 240 aaPredicted RBP15.52■□□□□ 0.07
PUF60-203ENST00000453551 ZNF479Q96JC4 524 aa15.52■□□□□ 0.07
PUF60-203ENST00000453551 SPANXB1Q9NS25 103 aaPredicted RBP15.52■□□□□ 0.07
PUF60-203ENST00000453551 UBR5O95071 2799 aaPredicted RBP15.51■□□□□ 0.07
PUF60-203ENST00000453551 CRYBA4P53673 196 aa15.51■□□□□ 0.07
PUF60-203ENST00000453551 DYNLRB2Q8TF09 96 aa15.51■□□□□ 0.07
PUF60-203ENST00000453551 PYGO1Q9Y3Y4 419 aa15.51■□□□□ 0.07
PUF60-203ENST00000453551 TRAV25A0A0B4J276 109 aa15.5■□□□□ 0.07
PUF60-203ENST00000453551 PLEKHB2Q96CS7 222 aa15.5■□□□□ 0.07
PUF60-203ENST00000453551 USP9YO00507 2555 aaPredicted RBP15.5■□□□□ 0.07
PUF60-203ENST00000453551 AGRNO00468 2067 aa15.5■□□□□ 0.07
PUF60-203ENST00000453551 DUX3Q96PT4 197 aa15.5■□□□□ 0.07
PUF60-203ENST00000453551 ZNF462Q96JM2 2506 aa15.49■□□□□ 0.07
PUF60-203ENST00000453551 A0A0J9YY99 117 aa15.49■□□□□ 0.07
PUF60-203ENST00000453551 SCGB1D4Q6XE38 83 aa15.49■□□□□ 0.07
PUF60-203ENST00000453551 Q6ZSV7 163 aa15.49■□□□□ 0.07
PUF60-203ENST00000453551 KLHL30-AS1Q8NEE0 82 aa15.49■□□□□ 0.07
PUF60-203ENST00000453551 RAX2Q96IS3 184 aa15.49■□□□□ 0.07
PUF60-203ENST00000453551 UBE2D1P51668 147 aa15.48■□□□□ 0.07
PUF60-203ENST00000453551 SPXQ9BT56 116 aa15.48■□□□□ 0.07
PUF60-203ENST00000453551 CELSR2Q9HCU4 2923 aa15.48■□□□□ 0.07
PUF60-203ENST00000453551 RHODO00212 210 aa15.47■□□□□ 0.07
PUF60-203ENST00000453551 RNF151Q2KHN1 245 aa15.47■□□□□ 0.07
PUF60-203ENST00000453551 IGLV4-3A0A075B6K6 122 aa15.47■□□□□ 0.07
PUF60-203ENST00000453551 BEAN1Q3B7T3 259 aa15.47■□□□□ 0.07
PUF60-203ENST00000453551 TMEM170BQ5T4T1 132 aa15.47■□□□□ 0.07
PUF60-203ENST00000453551 AMELXQ99217 191 aa15.47■□□□□ 0.07
PUF60-203ENST00000453551 DOPEY2Q9Y3R5 2298 aa15.47■□□□□ 0.07
PUF60-203ENST00000453551 TMEM223A0PJW6 202 aa15.46■□□□□ 0.07
PUF60-203ENST00000453551 LEPROTO15243 131 aa15.46■□□□□ 0.07
PUF60-203ENST00000453551 INSP01308 110 aa15.46■□□□□ 0.07
PUF60-203ENST00000453551 EMP1P54849 157 aa15.46■□□□□ 0.07
PUF60-203ENST00000453551 C11orf72Q8NBR9 251 aa15.46■□□□□ 0.07
PUF60-203ENST00000453551 TSPEAR-AS2P59090 65 aa15.45■□□□□ 0.06
PUF60-203ENST00000453551 FHL3Q13643 280 aa15.45■□□□□ 0.06
PUF60-203ENST00000453551 DEFB104AQ8WTQ1 72 aa15.45■□□□□ 0.06
PUF60-203ENST00000453551 J3QQQ9 107 aa15.45■□□□□ 0.06
PUF60-203ENST00000453551 KHDC1LQ5JSQ8 128 aa15.45■□□□□ 0.06
PUF60-203ENST00000453551 SLC25A29Q8N8R3 303 aa15.45■□□□□ 0.06
PUF60-203ENST00000453551 DNAJC30Q96LL9 226 aa15.45■□□□□ 0.06
PUF60-203ENST00000453551 EPG5Q9HCE0 2579 aa15.44■□□□□ 0.06
PUF60-203ENST00000453551 FAM208BQ5VWN6 2430 aa15.44■□□□□ 0.06
PUF60-203ENST00000453551 DNAJC9-AS1A6NH13 148 aa15.43■□□□□ 0.06
PUF60-203ENST00000453551 F8W1H4 67 aa15.43■□□□□ 0.06
PUF60-203ENST00000453551 G3V4G9 280 aa15.43■□□□□ 0.06
PUF60-203ENST00000453551 ZNF22P17026 224 aaPredicted RBP15.43■□□□□ 0.06
PUF60-203ENST00000453551 SRSF9Q13242 221 aaKnown RBP eCLIP15.43■□□□□ 0.06
PUF60-203ENST00000453551 CFAP126Q5VTH2 177 aa15.43■□□□□ 0.06
PUF60-203ENST00000453551 VCX2Q9H322 139 aa15.43■□□□□ 0.06
PUF60-203ENST00000453551 TNFRSF18Q9Y5U5 241 aa15.43■□□□□ 0.06
PUF60-203ENST00000453551 SAP30O75446 220 aa15.43■□□□□ 0.06
PUF60-203ENST00000453551 LGALS3P17931 250 aaKnown RBP15.43■□□□□ 0.06
PUF60-203ENST00000453551 VPS25Q9BRG1 176 aa15.43■□□□□ 0.06
PUF60-203ENST00000453551 RS1O15537 224 aa15.42■□□□□ 0.06
PUF60-203ENST00000453551 LINC01587Q99440 93 aa15.42■□□□□ 0.06
PUF60-203ENST00000453551 OPRPNQ99935 248 aaPredicted RBP15.42■□□□□ 0.06
PUF60-203ENST00000453551 IGHV3-53P01767 116 aa15.41■□□□□ 0.06
PUF60-203ENST00000453551 IGHV3-30P01768 117 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 IGHV3-30-5P0DP03 117 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 PCP4P48539 62 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 SPANXA1Q9NS26 97 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 PTPN13Q12923 2485 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 UTP20O75691 2785 aaKnown RBP15.4■□□□□ 0.06
PUF60-203ENST00000453551 CD28P10747 220 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 HTN1P15515 57 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 PROK1P58294 105 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 ODF3L2Q3SX64 289 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 FAM104AQ969W3 186 aa15.4■□□□□ 0.06
PUF60-203ENST00000453551 LRRK2Q5S007 2527 aa15.39■□□□□ 0.05
PUF60-203ENST00000453551 MRPS36P82909 103 aaKnown RBP15.39■□□□□ 0.05
PUF60-203ENST00000453551 CREBBPQ92793 2442 aa15.39■□□□□ 0.05
PUF60-203ENST00000453551 NAV2Q8IVL1 2488 aa15.39■□□□□ 0.05
PUF60-203ENST00000453551 POLQO75417 2590 aa15.39■□□□□ 0.05
PUF60-203ENST00000453551 IL17DQ8TAD2 202 aa15.38■□□□□ 0.05
PUF60-203ENST00000453551 IGHV3-73A0A0B4J1V6 119 aa15.38■□□□□ 0.05
PUF60-203ENST00000453551 WFDC11Q8NEX6 87 aa15.38■□□□□ 0.05
PUF60-203ENST00000453551 CHCHD7Q9BUK0 85 aa15.38■□□□□ 0.05
PUF60-203ENST00000453551 PGPEP1Q9NXJ5 209 aa15.38■□□□□ 0.05
PUF60-203ENST00000453551 A0A0J9YXV3 536 aa15.37■□□□□ 0.05
PUF60-203ENST00000453551 Q6ZSN1 163 aa15.37■□□□□ 0.05
PUF60-203ENST00000453551 NDUFA11Q86Y39 141 aa15.36■□□□□ 0.05
PUF60-203ENST00000453551 MRPL16Q9NX20 251 aaKnown RBP15.36■□□□□ 0.05
PUF60-203ENST00000453551 PRO0461Q9UI25 63 aa15.36■□□□□ 0.05
PUF60-203ENST00000453551 CRYBG3Q68DQ2 2970 aa15.35■□□□□ 0.05
PUF60-203ENST00000453551 CCL24O00175 119 aa15.35■□□□□ 0.05
PUF60-203ENST00000453551 PRM2P04554 102 aa15.35■□□□□ 0.05
PUF60-203ENST00000453551 C16orf95Q9H693 158 aa15.35■□□□□ 0.05
PUF60-203ENST00000453551 NACAE9PAV3 2078 aa15.35■□□□□ 0.05
PUF60-203ENST00000453551 ZANQ9Y493 2812 aa15.34■□□□□ 0.05
PUF60-203ENST00000453551 ZFYVE26Q68DK2 2539 aa15.34■□□□□ 0.05
PUF60-203ENST00000453551 TSPAN13O95857 204 aa15.34■□□□□ 0.05
PUF60-203ENST00000453551 CMC4P56277 68 aaPredicted RBP15.34■□□□□ 0.05
PUF60-203ENST00000453551 LYRM7Q5U5X0 104 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 293.7 ms