RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ZNF56Q15929 161 aa10.79□□□□□ -0.68
VCX3B-204ENST00000453306 ESRGQ1W209 222 aa10.79□□□□□ -0.68
VCX3B-204ENST00000453306 GAGE13Q4V321 117 aa10.79□□□□□ -0.68
VCX3B-204ENST00000453306 UBE2DNLQ8IWF7 75 aa10.79□□□□□ -0.68
VCX3B-204ENST00000453306 NEXN-AS1Q8NBZ9 246 aa10.79□□□□□ -0.68
VCX3B-204ENST00000453306 BORCS7Q96B45 105 aa10.79□□□□□ -0.68
VCX3B-204ENST00000453306 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
VCX3B-204ENST00000453306 A0A1B0GVY2 172 aa10.78□□□□□ -0.68
VCX3B-204ENST00000453306 M0R2N4 97 aa10.78□□□□□ -0.68
VCX3B-204ENST00000453306 SMIM17P0DL12 118 aa10.78□□□□□ -0.68
VCX3B-204ENST00000453306 RHOHQ15669 191 aa10.78□□□□□ -0.68
VCX3B-204ENST00000453306 C15orf53Q8NAA6 179 aa10.78□□□□□ -0.68
VCX3B-204ENST00000453306 KIAA1109Q2LD37 5005 aa10.77□□□□□ -0.69
VCX3B-204ENST00000453306 HBBP68871 147 aa10.77□□□□□ -0.69
VCX3B-204ENST00000453306 FAM104BQ5XKR9 115 aa10.77□□□□□ -0.69
VCX3B-204ENST00000453306 BTF3L4Q96K17 158 aa10.77□□□□□ -0.69
VCX3B-204ENST00000453306 PRADC1Q9BSG0 188 aa10.77□□□□□ -0.69
VCX3B-204ENST00000453306 ICOSQ9Y6W8 199 aa10.77□□□□□ -0.69
VCX3B-204ENST00000453306 SMKR1H3BMG3 65 aa10.76□□□□□ -0.69
VCX3B-204ENST00000453306 RTL8CO15255 209 aa10.76□□□□□ -0.69
VCX3B-204ENST00000453306 RPS10P46783 165 aaKnown RBP10.76□□□□□ -0.69
VCX3B-204ENST00000453306 MRPL23Q16540 153 aaKnown RBP10.76□□□□□ -0.69
VCX3B-204ENST00000453306 MRPL51Q4U2R6 128 aaKnown RBP10.76□□□□□ -0.69
VCX3B-204ENST00000453306 LYPD5Q6UWN5 251 aa10.76□□□□□ -0.69
VCX3B-204ENST00000453306 ATP5L2Q7Z4Y8 100 aa10.76□□□□□ -0.69
VCX3B-204ENST00000453306 ZNRF2Q8NHG8 242 aa10.76□□□□□ -0.69
VCX3B-204ENST00000453306 RPL39LQ96EH5 51 aaKnown RBP10.76□□□□□ -0.69
VCX3B-204ENST00000453306 LINC00588Q9Y4M8 146 aa10.76□□□□□ -0.69
VCX3B-204ENST00000453306 TGIF2-C20orf24A0A0A6YYL0 155 aa10.75□□□□□ -0.69
VCX3B-204ENST00000453306 A0A1B0GW15 77 aa10.75□□□□□ -0.69
VCX3B-204ENST00000453306 UBE2D3P61077 147 aa10.75□□□□□ -0.69
VCX3B-204ENST00000453306 UBE2D2P62837 147 aa10.75□□□□□ -0.69
VCX3B-204ENST00000453306 ELOBQ15370 118 aa10.75□□□□□ -0.69
VCX3B-204ENST00000453306 TMEM136Q6ZRR5 245 aa10.75□□□□□ -0.69
VCX3B-204ENST00000453306 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
VCX3B-204ENST00000453306 RASL11AQ6T310 242 aa10.74□□□□□ -0.69
VCX3B-204ENST00000453306 SMIM15Q7Z3B0 74 aa10.74□□□□□ -0.69
VCX3B-204ENST00000453306 NEGR1Q7Z3B1 354 aa10.74□□□□□ -0.69
VCX3B-204ENST00000453306 CBLN2Q8IUK8 224 aa10.74□□□□□ -0.69
VCX3B-204ENST00000453306 TRAV9-1A0A075B6T8 112 aa10.73□□□□□ -0.69
VCX3B-204ENST00000453306 NCR2O95944 276 aa10.73□□□□□ -0.69
VCX3B-204ENST00000453306 SRIP30626 198 aa10.73□□□□□ -0.69
VCX3B-204ENST00000453306 KCNIP4Q6PIL6 250 aa10.73□□□□□ -0.69
VCX3B-204ENST00000453306 NRACQ8N912 160 aa10.73□□□□□ -0.69
VCX3B-204ENST00000453306 IGLV2-18A0A075B6J9 118 aa10.72□□□□□ -0.69
VCX3B-204ENST00000453306 TRBV7-3A0A075B6L6 115 aa10.72□□□□□ -0.69
VCX3B-204ENST00000453306 IGHV3-38A0A0C4DH36 116 aa10.72□□□□□ -0.69
VCX3B-204ENST00000453306 SCO1O75880 301 aa10.72□□□□□ -0.69
VCX3B-204ENST00000453306 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
VCX3B-204ENST00000453306 DEFB104AQ8WTQ1 72 aa10.72□□□□□ -0.69
VCX3B-204ENST00000453306 NIT2Q9NQR4 276 aa10.72□□□□□ -0.69
VCX3B-204ENST00000453306 S100PP25815 95 aa10.71□□□□□ -0.69
VCX3B-204ENST00000453306 Q6ZR54 194 aa10.71□□□□□ -0.69
VCX3B-204ENST00000453306 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
VCX3B-204ENST00000453306 TRBV24-1A0A075B6N3 115 aa10.7□□□□□ -0.7
VCX3B-204ENST00000453306 RPL36AP83881 106 aaKnown RBP10.7□□□□□ -0.7
VCX3B-204ENST00000453306 C1orf134Q5TEV5 83 aa10.7□□□□□ -0.7
VCX3B-204ENST00000453306 RPL36ALQ969Q0 106 aaKnown RBP10.7□□□□□ -0.7
VCX3B-204ENST00000453306 MRAP2Q96G30 205 aa10.7□□□□□ -0.7
VCX3B-204ENST00000453306 FAT2Q9NYQ8 4349 aa10.69□□□□□ -0.7
VCX3B-204ENST00000453306 TRBV6-5A0A0K0K1A5 114 aa10.69□□□□□ -0.7
VCX3B-204ENST00000453306 ATP6V1G1O75348 118 aa10.69□□□□□ -0.7
VCX3B-204ENST00000453306 S100A8P05109 93 aa10.69□□□□□ -0.7
VCX3B-204ENST00000453306 TIRAPP58753 221 aa10.69□□□□□ -0.7
VCX3B-204ENST00000453306 DNAJC30Q96LL9 226 aa10.69□□□□□ -0.7
VCX3B-204ENST00000453306 GTSF1LQ9H1H1 148 aa10.69□□□□□ -0.7
VCX3B-204ENST00000453306 MRPS16Q9Y3D3 137 aaKnown RBP10.69□□□□□ -0.7
VCX3B-204ENST00000453306 DNAH2Q9P225 4427 aa10.69□□□□□ -0.7
VCX3B-204ENST00000453306 D6R8Y8 96 aa10.68□□□□□ -0.7
VCX3B-204ENST00000453306 H7C1H1 209 aa10.68□□□□□ -0.7
VCX3B-204ENST00000453306 KIAA1644Q3SXP7 199 aa10.68□□□□□ -0.7
VCX3B-204ENST00000453306 FRZBQ92765 325 aa10.68□□□□□ -0.7
VCX3B-204ENST00000453306 SMCO4Q9NRQ5 59 aa10.68□□□□□ -0.7
VCX3B-204ENST00000453306 TNFRSF18Q9Y5U5 241 aa10.68□□□□□ -0.7
VCX3B-204ENST00000453306 PKHD1P08F94 4074 aa10.68□□□□□ -0.7
VCX3B-204ENST00000453306 NPYP01303 97 aa10.67□□□□□ -0.7
VCX3B-204ENST00000453306 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
VCX3B-204ENST00000453306 CCL18P55774 89 aa10.67□□□□□ -0.7
VCX3B-204ENST00000453306 OR10J3Q5JRS4 329 aa10.67□□□□□ -0.7
VCX3B-204ENST00000453306 SH2D6Q7Z4S9 175 aa10.67□□□□□ -0.7
VCX3B-204ENST00000453306 GNB1LQ9BYB4 327 aa10.67□□□□□ -0.7
VCX3B-204ENST00000453306 CKS2P33552 79 aa10.66□□□□□ -0.7
VCX3B-204ENST00000453306 WFDC10BQ8IUB3 73 aa10.66□□□□□ -0.7
VCX3B-204ENST00000453306 Q8N3U1 123 aa10.66□□□□□ -0.7
VCX3B-204ENST00000453306 UPK3BQ9BT76 320 aa10.66□□□□□ -0.7
VCX3B-204ENST00000453306 TMEM70Q9BUB7 260 aa10.66□□□□□ -0.7
VCX3B-204ENST00000453306 DNAH17Q9UFH2 4485 aa10.65□□□□□ -0.7
VCX3B-204ENST00000453306 SDHAF1A6NFY7 115 aa10.65□□□□□ -0.7
VCX3B-204ENST00000453306 COLCA2A8K830 154 aa10.65□□□□□ -0.7
VCX3B-204ENST00000453306 TNFRSF6BO95407 300 aa10.65□□□□□ -0.7
VCX3B-204ENST00000453306 APCSP02743 223 aa10.64□□□□□ -0.71
VCX3B-204ENST00000453306 LELP1Q5T871 98 aa10.64□□□□□ -0.71
VCX3B-204ENST00000453306 DAZ4Q86SG3 579 aaKnown RBP10.64□□□□□ -0.71
VCX3B-204ENST00000453306 ST20Q9HBF5 79 aa10.64□□□□□ -0.71
VCX3B-204ENST00000453306 DAZ3Q9NR90 486 aaKnown RBP10.64□□□□□ -0.71
VCX3B-204ENST00000453306 TRBV6-8A0A0A6YYG3 113 aa10.63□□□□□ -0.71
VCX3B-204ENST00000453306 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
VCX3B-204ENST00000453306 KRTAP1-5Q9BYS1 174 aa10.63□□□□□ -0.71
VCX3B-204ENST00000453306 MRPL18Q9H0U6 180 aaKnown RBP10.63□□□□□ -0.71
VCX3B-204ENST00000453306 Q9H8V8 135 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms