RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 ZFP30Q9Y2G7 519 aa7.59□□□□□ -1.19
GARNL3-210ENST00000453030 MAP1LC3B2A6NCE7 125 aa7.58□□□□□ -1.2
GARNL3-210ENST00000453030 UMAD1C9J7I0 102 aa7.58□□□□□ -1.2
GARNL3-210ENST00000453030 RAB5CP51148 216 aa7.58□□□□□ -1.2
GARNL3-210ENST00000453030 ZNF674Q2M3X9 581 aa7.58□□□□□ -1.2
GARNL3-210ENST00000453030 ENHOQ6UWT2 76 aa7.58□□□□□ -1.2
GARNL3-210ENST00000453030 NKX6-2Q9C056 277 aaPredicted RBP7.58□□□□□ -1.2
GARNL3-210ENST00000453030 MAP1LC3BQ9GZQ8 125 aa7.58□□□□□ -1.2
GARNL3-210ENST00000453030 TRBV6-8A0A0A6YYG3 113 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 USP17L23D6RBM5 183 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 OXTP01178 125 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 LTAP01374 205 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 ANGP03950 147 aaKnown RBP7.57□□□□□ -1.2
GARNL3-210ENST00000453030 H2AFB1P0C5Y9 115 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 AKR1C3P42330 323 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 RPL37AP61513 92 aaKnown RBP7.57□□□□□ -1.2
GARNL3-210ENST00000453030 BLOC1S1P78537 153 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 RPL19P84098 196 aaKnown RBP7.57□□□□□ -1.2
GARNL3-210ENST00000453030 CLLU1Q5K131 121 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 CST9LP1Q5W188 147 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 CLPSL2Q6UWE3 100 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 COX8CQ7Z4L0 72 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 NEXN-AS1Q8NBZ9 246 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 SFT2D1Q8WV19 159 aa7.57□□□□□ -1.2
GARNL3-210ENST00000453030 OR10G8Q8NGN5 311 aa7.56□□□□□ -1.2
GARNL3-210ENST00000453030 OR10AG1Q8NH19 301 aa7.56□□□□□ -1.2
GARNL3-210ENST00000453030 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
GARNL3-210ENST00000453030 PLA2G2DQ9UNK4 145 aa7.56□□□□□ -1.2
GARNL3-210ENST00000453030 MUC21A0A0G2JKD1 596 aa7.55□□□□□ -1.2
GARNL3-210ENST00000453030 MUC21A0A140T8X8 626 aa7.55□□□□□ -1.2
GARNL3-210ENST00000453030 HNRNPA3P51991 378 aaKnown RBP7.55□□□□□ -1.2
GARNL3-210ENST00000453030 RAB4BP61018 213 aa7.55□□□□□ -1.2
GARNL3-210ENST00000453030 CCL20P78556 96 aa7.55□□□□□ -1.2
GARNL3-210ENST00000453030 TRBV6-1A0A0K0K1D8 114 aa7.54□□□□□ -1.2
GARNL3-210ENST00000453030 SSTP61278 116 aa7.54□□□□□ -1.2
GARNL3-210ENST00000453030 MBD3L1Q8WWY6 194 aa7.54□□□□□ -1.2
GARNL3-210ENST00000453030 SCO2A0A1W2PP80 73 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 F5H697 171 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 PAGE4O60829 102 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 PRSS1P07477 247 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 MIAQ16674 131 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 SPANXN1Q5VSR9 72 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 PRR27Q6MZM9 219 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 SLC7A5P1Q8MH63 180 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-210ENST00000453030 TCEAL7Q9BRU2 100 aa7.53□□□□□ -1.2
GARNL3-210ENST00000453030 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
GARNL3-210ENST00000453030 PANO1I0J062 215 aa7.52□□□□□ -1.21
GARNL3-210ENST00000453030 PKIAP61925 76 aa7.52□□□□□ -1.21
GARNL3-210ENST00000453030 GAGE6Q13070 117 aa7.52□□□□□ -1.21
GARNL3-210ENST00000453030 NTM-AS1Q6ZSK4 140 aa7.52□□□□□ -1.21
GARNL3-210ENST00000453030 DAZAP1Q96EP5 407 aaKnown RBP7.52□□□□□ -1.21
GARNL3-210ENST00000453030 GNG13Q9P2W3 67 aa7.52□□□□□ -1.21
GARNL3-210ENST00000453030 LINC00862A6NCI5 91 aa7.51□□□□□ -1.21
GARNL3-210ENST00000453030 SNAI2O43623 268 aa7.51□□□□□ -1.21
GARNL3-210ENST00000453030 CXCL1P09341 107 aa7.51□□□□□ -1.21
GARNL3-210ENST00000453030 RBX1P62877 108 aa7.51□□□□□ -1.21
GARNL3-210ENST00000453030 LINC00269Q8N2A0 174 aa7.51□□□□□ -1.21
GARNL3-210ENST00000453030 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
GARNL3-210ENST00000453030 LYPD6BQ8NI32 183 aa7.51□□□□□ -1.21
GARNL3-210ENST00000453030 DERL1Q9BUN8 251 aa7.51□□□□□ -1.21
GARNL3-210ENST00000453030 IGLV10-54A0A075B6I4 117 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 TRBV25-1A0A075B6N4 114 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 TRAV1-1A0A0B4J248 108 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 SMIM17P0DL12 118 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 AP1S3Q96PC3 154 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 PRR34Q9NV39 138 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 VAX2Q9UIW0 290 aa7.5□□□□□ -1.21
GARNL3-210ENST00000453030 MGPP08493 103 aa7.49□□□□□ -1.21
GARNL3-210ENST00000453030 OR5AL1P0C617 328 aa7.49□□□□□ -1.21
GARNL3-210ENST00000453030 SRSF3P84103 164 aaKnown RBP7.49□□□□□ -1.21
GARNL3-210ENST00000453030 TMEM97Q5BJF2 176 aa7.49□□□□□ -1.21
GARNL3-210ENST00000453030 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
GARNL3-210ENST00000453030 BAGE2Q86Y30 109 aa7.49□□□□□ -1.21
GARNL3-210ENST00000453030 MLST8Q9BVC4 326 aa7.49□□□□□ -1.21
GARNL3-210ENST00000453030 TPPP3Q9BW30 176 aa7.49□□□□□ -1.21
GARNL3-210ENST00000453030 EIF5A2Q9GZV4 153 aaKnown RBP7.49□□□□□ -1.21
GARNL3-210ENST00000453030 hDV102S1A0JD36 115 aa7.48□□□□□ -1.21
GARNL3-210ENST00000453030 IFNA1P01562 189 aa7.48□□□□□ -1.21
GARNL3-210ENST00000453030 S100A9P06702 114 aaKnown RBP7.48□□□□□ -1.21
GARNL3-210ENST00000453030 REG3AQ06141 175 aa7.48□□□□□ -1.21
GARNL3-210ENST00000453030 NDUFA5Q16718 116 aa7.48□□□□□ -1.21
GARNL3-210ENST00000453030 FAM210AQ96ND0 272 aa7.48□□□□□ -1.21
GARNL3-210ENST00000453030 SSBP4Q9BWG4 385 aaPredicted RBP7.48□□□□□ -1.21
GARNL3-210ENST00000453030 KIF25-AS1Q9Y6Z4 181 aa7.48□□□□□ -1.21
GARNL3-210ENST00000453030 IGHV1-24A0A0C4DH33 117 aa7.47□□□□□ -1.21
GARNL3-210ENST00000453030 GZMBP10144 247 aa7.47□□□□□ -1.21
GARNL3-210ENST00000453030 BCL2P10415 239 aa7.47□□□□□ -1.21
GARNL3-210ENST00000453030 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
GARNL3-210ENST00000453030 SDIM1Q6ZPB5 146 aa7.47□□□□□ -1.21
GARNL3-210ENST00000453030 MANBALQ9NQG1 85 aa7.47□□□□□ -1.21
GARNL3-210ENST00000453030 MED9Q9NWA0 146 aa7.47□□□□□ -1.21
GARNL3-210ENST00000453030 TNXBP22105 4242 aa7.47□□□□□ -1.21
GARNL3-210ENST00000453030 RNF213Q63HN8 5207 aa7.46□□□□□ -1.21
GARNL3-210ENST00000453030 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
GARNL3-210ENST00000453030 C9JQL5 133 aa7.46□□□□□ -1.22
GARNL3-210ENST00000453030 CHTF8P0CG12 524 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms