RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TRBV24-1A0A075B6N3 115 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 A0A096LPF7 62 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 GYPEP15421 78 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 RAB4AP20338 218 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 MRPL23Q16540 153 aaKnown RBP8.06□□□□□ -1.12
SCN9A-204ENST00000452182 COX19Q49B96 90 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 SH2D6Q7Z4S9 175 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 AMN1Q8IY45 258 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 RNF185Q96GF1 192 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 SMCO4Q9NRQ5 59 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 ICOSQ9Y6W8 199 aa8.06□□□□□ -1.12
SCN9A-204ENST00000452182 PLECQ15149 4684 aaKnown RBP8.05□□□□□ -1.12
SCN9A-204ENST00000452182 ATP6V1G1O75348 118 aa8.05□□□□□ -1.12
SCN9A-204ENST00000452182 C21orf62-AS1Q17RA5 79 aa8.05□□□□□ -1.12
SCN9A-204ENST00000452182 MRAP2Q96G30 205 aa8.05□□□□□ -1.12
SCN9A-204ENST00000452182 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
SCN9A-204ENST00000452182 YPEL4Q96NS1 127 aa8.05□□□□□ -1.12
SCN9A-204ENST00000452182 TENM2Q9NT68 2774 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 TRBV7-3A0A075B6L6 115 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 LOC100131303A0A0U1RQF7 123 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 NUDT3O95989 172 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 LINC00694P0DN24 101 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 SRIP30626 198 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 NEXN-AS1Q8NBZ9 246 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 GNB1LQ9BYB4 327 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 Q9UF83 564 aa8.04□□□□□ -1.12
SCN9A-204ENST00000452182 P0DMU3 169 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 FAM231AP0DMU4 169 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 FAM231CP0DMU5 169 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 RPL36AP83881 106 aaKnown RBP8.03□□□□□ -1.12
SCN9A-204ENST00000452182 MRPL51Q4U2R6 128 aaKnown RBP8.03□□□□□ -1.12
SCN9A-204ENST00000452182 TMEM136Q6ZRR5 245 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 NEGR1Q7Z3B1 354 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 CBLN2Q8IUK8 224 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 RPL36ALQ969Q0 106 aaKnown RBP8.03□□□□□ -1.12
SCN9A-204ENST00000452182 NIT2Q9NQR4 276 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 TGIF2-C20orf24A0A0A6YYL0 155 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 TRAV26-2A0A0B4J265 109 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 H3BS24 57 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 PPBPP02775 128 aa8.03□□□□□ -1.12
SCN9A-204ENST00000452182 GAGE12JA6NER3 117 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 PPP1R17O96001 155 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 MT-ND6P03923 174 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 UBE2D3P61077 147 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 UBE2D2P62837 147 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 GAGE1Q13065 139 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 GAGE4Q13068 117 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 GAGE5Q13069 117 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 GAGE13Q4V321 117 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 ZNRF2Q8NHG8 242 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 TNFRSF18Q9Y5U5 241 aa8.02□□□□□ -1.13
SCN9A-204ENST00000452182 TRBV6-5A0A0K0K1A5 114 aa8.01□□□□□ -1.13
SCN9A-204ENST00000452182 TIRAPP58753 221 aa8.01□□□□□ -1.13
SCN9A-204ENST00000452182 ATP6V0E2Q8NHE4 81 aa8.01□□□□□ -1.13
SCN9A-204ENST00000452182 CKS2P33552 79 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 DAZ4Q86SG3 579 aaKnown RBP8□□□□□ -1.13
SCN9A-204ENST00000452182 NRACQ8N912 160 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 DAZ3Q9NR90 486 aaKnown RBP8□□□□□ -1.13
SCN9A-204ENST00000452182 D6R8Y8 96 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 PHOX2AO14813 284 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 GAS8-AS1O95177 125 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
SCN9A-204ENST00000452182 CCL18P55774 89 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 ESRGQ1W209 222 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 OR10J3Q5JRS4 329 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 LYPD5Q6UWN5 251 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 ORMDL3Q8N138 153 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 SREK1IP1Q8N9Q2 155 aaPredicted RBP8□□□□□ -1.13
SCN9A-204ENST00000452182 RPL39LQ96EH5 51 aaKnown RBP8□□□□□ -1.13
SCN9A-204ENST00000452182 LYSTQ99698 3801 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 GTSF1LQ9H1H1 148 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 LAMTOR2Q9Y2Q5 125 aa8□□□□□ -1.13
SCN9A-204ENST00000452182 SMKR1H3BMG3 65 aa7.99□□□□□ -1.13
SCN9A-204ENST00000452182 NCR2O95944 276 aa7.99□□□□□ -1.13
SCN9A-204ENST00000452182 APCSP02743 223 aa7.99□□□□□ -1.13
SCN9A-204ENST00000452182 LGALS9CQ6DKI2 356 aa7.99□□□□□ -1.13
SCN9A-204ENST00000452182 SDHAF1A6NFY7 115 aa7.98□□□□□ -1.13
SCN9A-204ENST00000452182 TMEM97Q5BJF2 176 aa7.98□□□□□ -1.13
SCN9A-204ENST00000452182 C20orf78Q9BR46 151 aa7.98□□□□□ -1.13
SCN9A-204ENST00000452182 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
SCN9A-204ENST00000452182 TRBV27A0A0K0K1C4 114 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 COLCA2A8K830 154 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 SCO1O75880 301 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 TNFRSF6BO95407 300 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 POLR2KP53803 58 aaKnown RBP7.97□□□□□ -1.13
SCN9A-204ENST00000452182 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
SCN9A-204ENST00000452182 RPL32P62910 135 aaKnown RBP7.97□□□□□ -1.13
SCN9A-204ENST00000452182 PRELID3AQ96N28 172 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 UPK3BQ9BT76 320 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 TMEM70Q9BUB7 260 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 AP5S1Q9NUS5 200 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 LINC00588Q9Y4M8 146 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 TRAPPC1Q9Y5R8 145 aa7.97□□□□□ -1.13
SCN9A-204ENST00000452182 PRSS47A8MTI9 375 aa7.96□□□□□ -1.13
SCN9A-204ENST00000452182 LELP1Q5T871 98 aa7.96□□□□□ -1.13
SCN9A-204ENST00000452182 MRPS16Q9Y3D3 137 aaKnown RBP7.96□□□□□ -1.13
SCN9A-204ENST00000452182 VCYO14598 125 aa7.96□□□□□ -1.14
SCN9A-204ENST00000452182 NPYP01303 97 aa7.96□□□□□ -1.14
SCN9A-204ENST00000452182 FABP9Q0Z7S8 132 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms