RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TRAV4A0A0B4J268 109 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 A0A0J9YY99 117 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 PAX4O43316 350 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 RNASE3P12724 160 aaKnown RBP6.22□□□□□ -1.41
COL8A1-203ENST00000452013 CTRLP40313 264 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 CCL18P55774 89 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 KRTDAPP60985 99 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 GAGE1Q13065 139 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 FHL2Q14192 279 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 PIK3CD-AS1Q5SR53 167 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 PRR27Q6MZM9 219 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
COL8A1-203ENST00000452013 A0A1B0GUT8 65 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 A0A1B0GV90 55 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 ARMS2P0C7Q2 107 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 C3orf79P0CE67 100 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 NIT1Q86X76 327 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 Q8N976 141 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 SYT8Q8NBV8 401 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 ZNF479Q96JC4 524 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 TMEM70Q9BUB7 260 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 SNHG12Q9BXW3 62 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 HSPB8Q9UJY1 196 aa6.21□□□□□ -1.42
COL8A1-203ENST00000452013 MRPS16Q9Y3D3 137 aaKnown RBP6.21□□□□□ -1.42
COL8A1-203ENST00000452013 TRAV9-2A0A087WT02 112 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 TMSB15BA0A087X1C1 80 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 A8MWV9 139 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 TCAPO15273 167 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 RS1O15537 224 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 CRYBA4P53673 196 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 MRPL23Q16540 153 aaKnown RBP6.2□□□□□ -1.42
COL8A1-203ENST00000452013 SPATA45Q537H7 98 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 COL5A1-AS1Q5SY13 56 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 PET117Q6UWS5 81 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 OR2D3Q8NGH3 330 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 VSIG2Q96IQ7 327 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 ST20Q9HBF5 79 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 PHLDA3Q9Y5J5 127 aa6.2□□□□□ -1.42
COL8A1-203ENST00000452013 H3BVH4 76 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 LINC00614P0C842 121 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 IGLC3P0DOY3 106 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 MED14OSP0DP75 135 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 CAMPP49913 170 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 KIAA1644Q3SXP7 199 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 CFAP126Q5VTH2 177 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 GTSF1Q8WW33 167 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 TMEM191AQ9H0A3 160 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 PAM16Q9Y3D7 125 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 ICOSQ9Y6W8 199 aa6.19□□□□□ -1.42
COL8A1-203ENST00000452013 A0A096LPF7 62 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 F2Z2F3 143 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 LEPROTL1O95214 131 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 NTF3P20783 257 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
COL8A1-203ENST00000452013 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
COL8A1-203ENST00000452013 ZFP2Q6ZN57 461 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 SPATA12Q7Z6I5 190 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 PGLYRP4Q96LB8 373 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 PMCHL2Q9BQD1 86 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 PRADC1Q9BSG0 188 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 MAP1LC3CQ9BXW4 147 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 SCRT2Q9NQ03 307 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 LAMTOR2Q9Y2Q5 125 aa6.18□□□□□ -1.42
COL8A1-203ENST00000452013 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
COL8A1-203ENST00000452013 TRBV6-4A0A1B0GX49 114 aa6.17□□□□□ -1.42
COL8A1-203ENST00000452013 EREGO14944 169 aa6.17□□□□□ -1.42
COL8A1-203ENST00000452013 PPBPP02775 128 aa6.17□□□□□ -1.42
COL8A1-203ENST00000452013 GATA1P15976 413 aaPredicted RBP6.17□□□□□ -1.42
COL8A1-203ENST00000452013 ESRGQ1W209 222 aa6.17□□□□□ -1.42
COL8A1-203ENST00000452013 NEGR1Q7Z3B1 354 aa6.17□□□□□ -1.42
COL8A1-203ENST00000452013 SH2D6Q7Z4S9 175 aa6.17□□□□□ -1.42
COL8A1-203ENST00000452013 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
COL8A1-203ENST00000452013 SSBP4Q9BWG4 385 aaPredicted RBP6.17□□□□□ -1.42
COL8A1-203ENST00000452013 STARD9Q9P2P6 4700 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 IGHV3-73A0A0B4J1V6 119 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 SYS1-DBNDD2H3BUS1 97 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 M0R381 172 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 RHODO00212 210 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 GYPEP15421 78 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 RHOHQ15669 191 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 SPANXN1Q5VSR9 72 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 Q6ZN92 141 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 OR10AG1Q8NH19 301 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 AP5S1Q9NUS5 200 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 LINC00588Q9Y4M8 146 aa6.16□□□□□ -1.42
COL8A1-203ENST00000452013 CSMD3Q7Z407 3707 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 TENM2Q9NT68 2774 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 K7EQD1 137 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 SNAI2O43623 268 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 LYPD5Q6UWN5 251 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 FA2HQ7L5A8 372 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 ORMDL3Q8N138 153 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 CNFNQ9BYD5 112 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 Q9H8V8 135 aa6.15□□□□□ -1.42
COL8A1-203ENST00000452013 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
COL8A1-203ENST00000452013 IGLV2-18A0A075B6J9 118 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms