RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	GZMB	P10144	247 aa		5.77	□□□□□ -1.49
RFX3-209	ENST00000451859	CENPW	Q5EE01	88 aa		5.77	□□□□□ -1.49
RFX3-209	ENST00000451859	MLST8	Q9BVC4	326 aa		5.77	□□□□□ -1.49
RFX3-209	ENST00000451859	TPPP3	Q9BW30	176 aa		5.77	□□□□□ -1.49
RFX3-209	ENST00000451859	TM2D2	Q9BX73	214 aa		5.77	□□□□□ -1.49
RFX3-209	ENST00000451859	KLK12	Q9UKR0	248 aa		5.77	□□□□□ -1.49
RFX3-209	ENST00000451859	hCG_2014768	A0A024R1R8	64 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	IGKV2D-24	A0A075B6R9	120 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859		A0A087WX48	190 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	TRBV10-1	A0A0K0K1A3	114 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	RAB19	A4D1S5	217 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	RBFOX3	A6NFN3	312 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	TEX46	H3BTG2	121 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	UBE2D3	P61077	147 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	UBE2D2	P62837	147 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	TOR2A	Q5JU69	321 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859		Q5VSD8	79 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	EIF5AL1	Q6IS14	154 aa	Known RBP	5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	KCNIP4	Q6PIL6	250 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	NIT1	Q86X76	327 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	NEXN-AS1	Q8NBZ9	246 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	BAALC	Q8WXS3	180 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	FRZB	Q92765	325 aa		5.76	□□□□□ -1.49
RFX3-209	ENST00000451859	TRBV7-3	A0A075B6L6	115 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	TMEM262	E9PQX1	116 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	SNAI2	O43623	268 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	MGP	P08493	103 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	CXCL1	P09341	107 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	SMIM17	P0DL12	118 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	SULT1A2	P50226	295 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	RAB4B	P61018	213 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	OR2D3	Q8NGH3	330 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	NTN5	Q8WTR8	489 aa	Predicted RBP	5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	C11orf52	Q96A22	123 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	UBE2W	Q96B02	151 aa		5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	DAZAP1	Q96EP5	407 aa	Known RBP	5.75	□□□□□ -1.49
RFX3-209	ENST00000451859	TRAV1-1	A0A0B4J248	108 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	IFNA1	P01562	189 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	IGLV2-8	P01709	118 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	OR5AL1	P0C617	328 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	GNG4	P50150	75 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	RAB5C	P51148	216 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	MEF2B	Q02080	365 aa	Predicted RBP	5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	LINC01620	Q4KN68	170 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	TCTE3	Q8IZS6	198 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	RMI2	Q96E14	147 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	AP1S3	Q96PC3	154 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	CHCHD5	Q9BSY4	110 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	MED9	Q9NWA0	146 aa		5.74	□□□□□ -1.49
RFX3-209	ENST00000451859	TRBV6-8	A0A0A6YYG3	113 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859		P01737	135 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	C1QB	P02746	253 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	INAFM2	P0DMQ5	153 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	BCL2	P10415	239 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	MPV17L2	Q567V2	206 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	CLPSL2	Q6UWE3	100 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	SLC51B	Q86UW2	128 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	C15orf54	Q8N8G6	183 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	FER1L6-AS1	Q8NA97	138 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	OR10G8	Q8NGN5	311 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	FAM30A	Q9NZY2	134 aa		5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	FLG2	Q5D862	2391 aa	Predicted RBP	5.73	□□□□□ -1.49
RFX3-209	ENST00000451859	SRRM2	Q9UQ35	2752 aa	Known RBP	5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	TRBV20OR9-2	A0A075B6H5	130 aa		5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	PDE6D	O43924	150 aa		5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	CRP	P02741	224 aa		5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	ANG	P03950	147 aa	Known RBP	5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	RPS20	P60866	119 aa	Known RBP	5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	ELOB	Q15370	118 aa		5.72	□□□□□ -1.49
RFX3-209	ENST00000451859		Q8N976	141 aa		5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	DEFB104A	Q8WTQ1	72 aa		5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	TMEM70	Q9BUB7	260 aa		5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	KIF25-AS1	Q9Y6Z4	181 aa		5.72	□□□□□ -1.49
RFX3-209	ENST00000451859	C19orf71	A6NCJ1	209 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	HLA-DQA1	P01909	254 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	IGLC6	P0CF74	106 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	GAGE6	Q13070	117 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	SUMO4	Q6EEV6	95 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	ATRAID	Q6UW56	229 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	NTM-AS1	Q6ZSK4	140 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	AKAP14	Q86UN6	197 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	CHCHD7	Q9BUK0	85 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	C1orf43	Q9BWL3	253 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	VAX2	Q9UIW0	290 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	COX11	Q9Y6N1	276 aa		5.71	□□□□□ -1.5
RFX3-209	ENST00000451859	XKRY2	A2RUG3	117 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	NKX2-5	P52952	324 aa	Predicted RBP	5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	CEBPG	P53567	150 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	CACNG7	P62955	275 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	LYZL1	Q6UWQ5	148 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	ENHO	Q6UWT2	76 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	ALKAL2	Q6UX46	152 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859		Q6ZNX1	250 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	C9orf62	Q8N4C0	152 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	RNASE7	Q9H1E1	156 aa	Known RBP	5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	MYCBP2	O75592	4640 aa		5.7	□□□□□ -1.5
RFX3-209	ENST00000451859	HERC1	Q15751	4861 aa		5.69	□□□□□ -1.5
RFX3-209	ENST00000451859	TRBV25-1	A0A075B6N4	114 aa		5.69	□□□□□ -1.5
RFX3-209	ENST00000451859		H7C1H1	209 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms