RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 A0A087WX48 190 aa11.45□□□□□ -0.58
CCHCR1-208ENST00000451521 HOXD3P31249 432 aaPredicted RBP11.44□□□□□ -0.58
CCHCR1-208ENST00000451521 SYNJ2BPP57105 145 aa11.44□□□□□ -0.58
CCHCR1-208ENST00000451521 CFAP126Q5VTH2 177 aa11.44□□□□□ -0.58
CCHCR1-208ENST00000451521 ZFAND6Q6FIF0 208 aa11.44□□□□□ -0.58
CCHCR1-208ENST00000451521 SFTA2Q6UW10 78 aa11.44□□□□□ -0.58
CCHCR1-208ENST00000451521 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
CCHCR1-208ENST00000451521 NIPBLQ6KC79 2804 aaeCLIP11.43□□□□□ -0.58
CCHCR1-208ENST00000451521 LINC01619G3V211 115 aa11.43□□□□□ -0.58
CCHCR1-208ENST00000451521 PLNP26678 52 aa11.43□□□□□ -0.58
CCHCR1-208ENST00000451521 LAGE3Q14657 143 aa11.43□□□□□ -0.58
CCHCR1-208ENST00000451521 ATP6V0E2Q8NHE4 81 aa11.43□□□□□ -0.58
CCHCR1-208ENST00000451521 ANK3Q12955 4377 aaKnown RBP11.42□□□□□ -0.58
CCHCR1-208ENST00000451521 WNK1Q9H4A3 2382 aa11.42□□□□□ -0.58
CCHCR1-208ENST00000451521 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
CCHCR1-208ENST00000451521 KLLNB2CW77 178 aa11.42□□□□□ -0.58
CCHCR1-208ENST00000451521 K7EQG2 157 aa11.42□□□□□ -0.58
CCHCR1-208ENST00000451521 NRACQ8N912 160 aa11.41□□□□□ -0.58
CCHCR1-208ENST00000451521 CARD19Q96LW7 228 aa11.41□□□□□ -0.58
CCHCR1-208ENST00000451521 HIVEP2P31629 2446 aa11.41□□□□□ -0.58
CCHCR1-208ENST00000451521 TRBV20-1A0A075B6N2 111 aa11.41□□□□□ -0.58
CCHCR1-208ENST00000451521 J3KRW8 73 aa11.41□□□□□ -0.58
CCHCR1-208ENST00000451521 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 MED14OSP0DP75 135 aa11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 KRTAP1-1Q07627 177 aa11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 DLX4Q92988 240 aaPredicted RBP11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 CCDC179H3BU77 68 aa11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 H3BVH4 76 aa11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 PSMB2P49721 201 aa11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 ODF3Q96PU9 254 aa11.4□□□□□ -0.58
CCHCR1-208ENST00000451521 F8VRH5 84 aa11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 C18orf65Q6ZTR6 163 aa11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 HIVEP1P15822 2718 aa11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 SNRPD3P62318 126 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 SPANXN1Q5VSR9 72 aa11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 C4orf3Q8WVX3 66 aa11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 SETXQ7Z333 2677 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 SORL1Q92673 2214 aa11.39□□□□□ -0.59
CCHCR1-208ENST00000451521 H7C1H1 209 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 YAE1D1Q9NRH1 226 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 LOC107984156A0A0G2JMH3 177 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 A0A0J9YX75 114 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 DNAJC9-AS1A6NH13 148 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 ZNF688P0C7X2 276 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 ASIPP42127 132 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 Q6ZSV7 163 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 ARL17AQ8IVW1 177 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 PPDPFLQ8WWR9 84 aa11.38□□□□□ -0.59
CCHCR1-208ENST00000451521 FN1P02751 2386 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 TRAV12-1A0A0B4J245 112 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 GAGE12JA6NER3 117 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 LINC01549A6NIU2 74 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 GAGE7O76087 117 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 GAGE12FP0CL80 117 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 GAGE12GP0CL81 117 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 GAGE12IP0CL82 117 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 GAGE4Q13068 117 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 ZFP2Q6ZN57 461 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 SLURP1P55000 103 aa11.37□□□□□ -0.59
CCHCR1-208ENST00000451521 TNFRSF18Q9Y5U5 241 aa11.36□□□□□ -0.59
CCHCR1-208ENST00000451521 DEFB136Q30KP8 78 aa11.36□□□□□ -0.59
CCHCR1-208ENST00000451521 RNASE3P12724 160 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-208ENST00000451521 S100A4P26447 101 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-208ENST00000451521 TEN1Q86WV5 123 aa11.35□□□□□ -0.59
CCHCR1-208ENST00000451521 GNRH2O43555 120 aa11.35□□□□□ -0.59
CCHCR1-208ENST00000451521 UBE2D1P51668 147 aa11.35□□□□□ -0.59
CCHCR1-208ENST00000451521 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-208ENST00000451521 C11orf44Q8N8P7 122 aa11.35□□□□□ -0.59
CCHCR1-208ENST00000451521 ESM1Q9NQ30 184 aa11.35□□□□□ -0.59
CCHCR1-208ENST00000451521 UBE2D3P61077 147 aa11.34□□□□□ -0.59
CCHCR1-208ENST00000451521 UBE2D2P62837 147 aa11.34□□□□□ -0.59
CCHCR1-208ENST00000451521 CITED1Q99966 193 aa11.34□□□□□ -0.59
CCHCR1-208ENST00000451521 NXPH4O95158 308 aa11.34□□□□□ -0.59
CCHCR1-208ENST00000451521 PRADC1Q9BSG0 188 aa11.34□□□□□ -0.59
CCHCR1-208ENST00000451521 PHLDA3Q9Y5J5 127 aa11.34□□□□□ -0.59
CCHCR1-208ENST00000451521 NEXN-AS1Q8NBZ9 246 aa11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 TRAV2A0A0B4J234 112 aa11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 RHODO00212 210 aa11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 DUSP14O95147 198 aaKnown RBP11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 PLEKHB2Q96CS7 222 aa11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 DUX3Q96PT4 197 aa11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 SMIM2Q9BVW6 85 aa11.33□□□□□ -0.6
CCHCR1-208ENST00000451521 ZNF815PA8K554 130 aa11.32□□□□□ -0.6
CCHCR1-208ENST00000451521 M0R381 172 aa11.32□□□□□ -0.6
CCHCR1-208ENST00000451521 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
CCHCR1-208ENST00000451521 GAGE2EQ4V326 116 aa11.32□□□□□ -0.6
CCHCR1-208ENST00000451521 FAM159AQ6UWV7 190 aa11.32□□□□□ -0.6
CCHCR1-208ENST00000451521 GAGE2DQ9UEU5 116 aa11.32□□□□□ -0.6
CCHCR1-208ENST00000451521 JMJD1CQ15652 2540 aa11.32□□□□□ -0.6
CCHCR1-208ENST00000451521 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
CCHCR1-208ENST00000451521 SCGB1D4Q6XE38 83 aa11.31□□□□□ -0.6
CCHCR1-208ENST00000451521 KLHL30-AS1Q8NEE0 82 aa11.31□□□□□ -0.6
CCHCR1-208ENST00000451521 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
CCHCR1-208ENST00000451521 NSD1Q96L73 2696 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-208ENST00000451521 TRAV4A0A0B4J268 109 aa11.31□□□□□ -0.6
CCHCR1-208ENST00000451521 TRAV12-3A0A0B4J271 114 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms