RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 CHCHD5Q9BSY4 110 aa17.68■□□□□ 0.42
USP42-204ENST00000451154 A0A0D9SG52 128 aa17.67■□□□□ 0.42
USP42-204ENST00000451154 HMSDA8MTL9 139 aa17.67■□□□□ 0.42
USP42-204ENST00000451154 DEFB104AQ8WTQ1 72 aa17.67■□□□□ 0.42
USP42-204ENST00000451154 KANTRA0A1W2PQU2 76 aa17.66■□□□□ 0.42
USP42-204ENST00000451154 BCL2L11O43521 198 aa17.66■□□□□ 0.42
USP42-204ENST00000451154 CRPP02741 224 aa17.66■□□□□ 0.42
USP42-204ENST00000451154 NTM-AS1Q6ZSK4 140 aa17.66■□□□□ 0.42
USP42-204ENST00000451154 CIRBP-AS1Q8TBR5 109 aa17.66■□□□□ 0.42
USP42-204ENST00000451154 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.65■□□□□ 0.42
USP42-204ENST00000451154 KIF25-AS1Q9Y6Z4 181 aa17.65■□□□□ 0.42
USP42-204ENST00000451154 RPL35P42766 123 aaKnown RBP17.64■□□□□ 0.41
USP42-204ENST00000451154 CCL20P78556 96 aa17.64■□□□□ 0.41
USP42-204ENST00000451154 C14orf177Q52M58 125 aa17.64■□□□□ 0.41
USP42-204ENST00000451154 LRP1Q07954 4544 aaKnown RBP17.63■□□□□ 0.41
USP42-204ENST00000451154 KRTAP29-1A8MX34 341 aaPredicted RBP17.63■□□□□ 0.41
USP42-204ENST00000451154 SMIM17P0DL12 118 aa17.63■□□□□ 0.41
USP42-204ENST00000451154 DERL1Q9BUN8 251 aa17.63■□□□□ 0.41
USP42-204ENST00000451154 USP17L23D6RBM5 183 aa17.61■□□□□ 0.41
USP42-204ENST00000451154 GZMBP10144 247 aa17.61■□□□□ 0.41
USP42-204ENST00000451154 GNG13Q9P2W3 67 aa17.61■□□□□ 0.41
USP42-204ENST00000451154 VAX2Q9UIW0 290 aa17.61■□□□□ 0.41
USP42-204ENST00000451154 HLA-DQA1P01909 254 aa17.6■□□□□ 0.41
USP42-204ENST00000451154 KRTAP10-4P60372 401 aaPredicted RBP17.6■□□□□ 0.41
USP42-204ENST00000451154 PKIAP61925 76 aa17.6■□□□□ 0.41
USP42-204ENST00000451154 GAGE6Q13070 117 aa17.6■□□□□ 0.41
USP42-204ENST00000451154 EIF5AP63241 154 aaKnown RBP17.59■□□□□ 0.41
USP42-204ENST00000451154 MIAQ16674 131 aa17.59■□□□□ 0.41
USP42-204ENST00000451154 TMEM97Q5BJF2 176 aa17.59■□□□□ 0.41
USP42-204ENST00000451154 AP1S3Q96PC3 154 aa17.59■□□□□ 0.41
USP42-204ENST00000451154 TPPP3Q9BW30 176 aa17.59■□□□□ 0.41
USP42-204ENST00000451154 RBX1P62877 108 aa17.58■□□□□ 0.4
USP42-204ENST00000451154 CLPSL2Q6UWE3 100 aa17.58■□□□□ 0.4
USP42-204ENST00000451154 LINC00269Q8N2A0 174 aa17.57■□□□□ 0.4
USP42-204ENST00000451154 C11orf52Q96A22 123 aa17.57■□□□□ 0.4
USP42-204ENST00000451154 MANBALQ9NQG1 85 aa17.57■□□□□ 0.4
USP42-204ENST00000451154 IGLV2-8P01709 118 aa17.56■□□□□ 0.4
USP42-204ENST00000451154 PRSS1P07477 247 aa17.56■□□□□ 0.4
USP42-204ENST00000451154 MGPP08493 103 aa17.56■□□□□ 0.4
USP42-204ENST00000451154 CENPWQ5EE01 88 aa17.56■□□□□ 0.4
USP42-204ENST00000451154 DAZAP1Q96EP5 407 aaKnown RBP17.56■□□□□ 0.4
USP42-204ENST00000451154 PRR34Q9NV39 138 aa17.56■□□□□ 0.4
USP42-204ENST00000451154 TRBV25-1A0A075B6N4 114 aa17.55■□□□□ 0.4
USP42-204ENST00000451154 RAB19A4D1S5 217 aa17.55■□□□□ 0.4
USP42-204ENST00000451154 M0QY20 66 aa17.55■□□□□ 0.4
USP42-204ENST00000451154 FER1L6-AS1Q8NA97 138 aa17.55■□□□□ 0.4
USP42-204ENST00000451154 OR2D3Q8NGH3 330 aa17.55■□□□□ 0.4
USP42-204ENST00000451154 FAT3Q8TDW7 4589 aa17.55■□□□□ 0.4
USP42-204ENST00000451154 IGLC6P0CF74 106 aa17.54■□□□□ 0.4
USP42-204ENST00000451154 KRTAP26-1Q6PEX3 210 aa17.54■□□□□ 0.4
USP42-204ENST00000451154 TRAV1-1A0A0B4J248 108 aa17.53■□□□□ 0.4
USP42-204ENST00000451154 IQCJQ1A5X6 159 aa17.53■□□□□ 0.4
USP42-204ENST00000451154 RPS20P60866 119 aaKnown RBP17.52■□□□□ 0.4
USP42-204ENST00000451154 SUMO4Q6EEV6 95 aa17.52■□□□□ 0.4
USP42-204ENST00000451154 IGHV1-24A0A0C4DH33 117 aa17.51■□□□□ 0.39
USP42-204ENST00000451154 C19orf71A6NCJ1 209 aa17.51■□□□□ 0.39
USP42-204ENST00000451154 DGAT2L7PQ6IED9 249 aa17.51■□□□□ 0.39
USP42-204ENST00000451154 CACNG7P62955 275 aa17.5■□□□□ 0.39
USP42-204ENST00000451154 PKHD1L1Q86WI1 4243 aa17.49■□□□□ 0.39
USP42-204ENST00000451154 H7C1H1 209 aa17.49■□□□□ 0.39
USP42-204ENST00000451154 GNG4P50150 75 aa17.49■□□□□ 0.39
USP42-204ENST00000451154 NKX2-5P52952 324 aaPredicted RBP17.49■□□□□ 0.39
USP42-204ENST00000451154 IGLV10-54A0A075B6I4 117 aa17.48■□□□□ 0.39
USP42-204ENST00000451154 RAB5CP51148 216 aa17.48■□□□□ 0.39
USP42-204ENST00000451154 C9orf163Q8N9P6 203 aa17.48■□□□□ 0.39
USP42-204ENST00000451154 REG3AQ06141 175 aa17.47■□□□□ 0.39
USP42-204ENST00000451154 LYZL1Q6UWQ5 148 aa17.47■□□□□ 0.39
USP42-204ENST00000451154 P01737 135 aa17.46■□□□□ 0.39
USP42-204ENST00000451154 C20orf203Q8NBC4 194 aa17.46■□□□□ 0.39
USP42-204ENST00000451154 MED9Q9NWA0 146 aa17.46■□□□□ 0.39
USP42-204ENST00000451154 F2Z2F3 143 aa17.45■□□□□ 0.38
USP42-204ENST00000451154 TEX46H3BTG2 121 aa17.45■□□□□ 0.38
USP42-204ENST00000451154 IFNA1P01562 189 aa17.45■□□□□ 0.38
USP42-204ENST00000451154 MEF2BQ02080 365 aaPredicted RBP17.45■□□□□ 0.38
USP42-204ENST00000451154 RASL11AQ6T310 242 aa17.45■□□□□ 0.38
USP42-204ENST00000451154 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.45■□□□□ 0.38
USP42-204ENST00000451154 TRBV20OR9-2A0A075B6H5 130 aa17.44■□□□□ 0.38
USP42-204ENST00000451154 IGLV4-60A0A075B6I1 120 aa17.44■□□□□ 0.38
USP42-204ENST00000451154 XKRY2A2RUG3 117 aa17.44■□□□□ 0.38
USP42-204ENST00000451154 NTF3P20783 257 aa17.44■□□□□ 0.38
USP42-204ENST00000451154 SULT1A2P50226 295 aa17.44■□□□□ 0.38
USP42-204ENST00000451154 RPL37AP61513 92 aaKnown RBP17.44■□□□□ 0.38
USP42-204ENST00000451154 EIF5AL1Q6IS14 154 aaKnown RBP17.44■□□□□ 0.38
USP42-204ENST00000451154 SMIM12Q96EX1 92 aa17.44■□□□□ 0.38
USP42-204ENST00000451154 TMEM243Q9BU79 118 aa17.44■□□□□ 0.38
USP42-204ENST00000451154 PANO1I0J062 215 aa17.43■□□□□ 0.38
USP42-204ENST00000451154 PDE6DO43924 150 aa17.43■□□□□ 0.38
USP42-204ENST00000451154 OXTP01178 125 aa17.43■□□□□ 0.38
USP42-204ENST00000451154 SDIM1Q6ZPB5 146 aa17.43■□□□□ 0.38
USP42-204ENST00000451154 CLRN3Q8NCR9 226 aa17.43■□□□□ 0.38
USP42-204ENST00000451154 GFRA4Q9GZZ7 299 aa17.43■□□□□ 0.38
USP42-204ENST00000451154 TRGC1P0CF51 173 aa17.42■□□□□ 0.38
USP42-204ENST00000451154 DPH3P1Q9H4G8 78 aa17.42■□□□□ 0.38
USP42-204ENST00000451154 NIT2Q9NQR4 276 aa17.42■□□□□ 0.38
USP42-204ENST00000451154 A0A1B0GUV1 79 aa17.41■□□□□ 0.38
USP42-204ENST00000451154 C9orf62Q8N4C0 152 aa17.41■□□□□ 0.38
USP42-204ENST00000451154 NUDT10Q8NFP7 164 aa17.4■□□□□ 0.38
USP42-204ENST00000451154 NUDT11Q96G61 164 aa17.4■□□□□ 0.38
USP42-204ENST00000451154 BIN3Q9NQY0 253 aa17.4■□□□□ 0.38
USP42-204ENST00000451154 HMCN2Q8NDA2 5059 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms