RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 VCYO14598 125 aa10.23□□□□□ -0.77
USP39-207ENST00000450066 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
USP39-207ENST00000450066 TRBV27A0A0K0K1C4 114 aa10.22□□□□□ -0.77
USP39-207ENST00000450066 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
USP39-207ENST00000450066 SYS1-DBNDD2H3BUS1 97 aa10.22□□□□□ -0.77
USP39-207ENST00000450066 S100A12P80511 92 aa10.22□□□□□ -0.77
USP39-207ENST00000450066 OR4C5Q8NGB2 326 aa10.22□□□□□ -0.77
USP39-207ENST00000450066 X6R8D5 127 aa10.22□□□□□ -0.77
USP39-207ENST00000450066 IGHV3-53P01767 116 aa10.22□□□□□ -0.77
USP39-207ENST00000450066 NACAE9PAV3 2078 aa10.22□□□□□ -0.77
USP39-207ENST00000450066 TRAV4A0A0B4J268 109 aa10.21□□□□□ -0.77
USP39-207ENST00000450066 Q6ZSN1 163 aa10.21□□□□□ -0.77
USP39-207ENST00000450066 DNAH3Q8TD57 4116 aa10.21□□□□□ -0.78
USP39-207ENST00000450066 NUDT3O95989 172 aa10.21□□□□□ -0.78
USP39-207ENST00000450066 PET117Q6UWS5 81 aa10.21□□□□□ -0.78
USP39-207ENST00000450066 TEX43Q6ZNM6 134 aa10.21□□□□□ -0.78
USP39-207ENST00000450066 SPATA12Q7Z6I5 190 aa10.21□□□□□ -0.78
USP39-207ENST00000450066 KIR2DL4Q99706 377 aa10.21□□□□□ -0.78
USP39-207ENST00000450066 DEFB135Q30KP9 77 aa10.2□□□□□ -0.78
USP39-207ENST00000450066 NEGR1Q7Z3B1 354 aa10.2□□□□□ -0.78
USP39-207ENST00000450066 IFI27L1Q96BM0 104 aa10.19□□□□□ -0.78
USP39-207ENST00000450066 ZNF479Q96JC4 524 aa10.19□□□□□ -0.78
USP39-207ENST00000450066 A8MZ25 164 aa10.19□□□□□ -0.78
USP39-207ENST00000450066 CIDEAO60543 219 aa10.19□□□□□ -0.78
USP39-207ENST00000450066 P0DMU3 169 aa10.19□□□□□ -0.78
USP39-207ENST00000450066 FAM231AP0DMU4 169 aa10.19□□□□□ -0.78
USP39-207ENST00000450066 FAM231CP0DMU5 169 aa10.19□□□□□ -0.78
USP39-207ENST00000450066 TRGV2A0A075B6R0 118 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 C20orf202A1L168 122 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 GAGE7O76087 117 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 EMP1P54849 157 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 DNAJC30Q96LL9 226 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 TNFRSF18Q9Y5U5 241 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 G3V4G9 280 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 I3L3M4 83 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 G0S2P27469 103 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 TOMM6Q96B49 74 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 C18orf15Q96N68 181 aa10.18□□□□□ -0.78
USP39-207ENST00000450066 ATP5LO75964 103 aa10.17□□□□□ -0.78
USP39-207ENST00000450066 OR11H2Q8NH07 326 aa10.17□□□□□ -0.78
USP39-207ENST00000450066 RNF183Q96D59 192 aa10.17□□□□□ -0.78
USP39-207ENST00000450066 H0Y8G0 127 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 LINC01545Q5VT33 79 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 LINC00612Q8N6U2 182 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 Q9UF83 564 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 LINC01549A6NIU2 74 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 PCP4L1A6NKN8 68 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 C2orf66Q6UXQ4 117 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 ZNF664Q8N3J9 261 aa10.16□□□□□ -0.78
USP39-207ENST00000450066 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
USP39-207ENST00000450066 TSHBP01222 138 aa10.15□□□□□ -0.78
USP39-207ENST00000450066 MIFP14174 115 aa10.15□□□□□ -0.78
USP39-207ENST00000450066 RHOHQ15669 191 aa10.15□□□□□ -0.78
USP39-207ENST00000450066 VAMP8Q9BV40 100 aa10.15□□□□□ -0.78
USP39-207ENST00000450066 RIPPLY3P57055 190 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 PKIAP61925 76 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 MDFIQ99750 246 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 NBEAL1Q6ZS30 2694 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.14□□□□□ -0.79
USP39-207ENST00000450066 K7EQD1 137 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 LGALS9CQ6DKI2 356 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 SLC25A29Q8N8R3 303 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 SCGB3A1Q96QR1 104 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 CYSLTR1Q9Y271 337 aa10.14□□□□□ -0.79
USP39-207ENST00000450066 LYRM9A8MSI8 78 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 DEFB104AQ8WTQ1 72 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 NOTCH1P46531 2555 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 IGHV4-28A0A0C4DH34 117 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 TSTD3H0UI37 97 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 PRSS1P07477 247 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 DEFB130BP0DP73 79 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 DEFB130AP0DP74 79 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 ERASQ7Z444 233 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 Q8NAQ8 132 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 PAM16Q9Y3D7 125 aa10.13□□□□□ -0.79
USP39-207ENST00000450066 TRBV7-3A0A075B6L6 115 aa10.12□□□□□ -0.79
USP39-207ENST00000450066 TRBV6-4A0A1B0GX49 114 aa10.12□□□□□ -0.79
USP39-207ENST00000450066 TP53TG1Q9Y2A0 90 aa10.12□□□□□ -0.79
USP39-207ENST00000450066 TRAV9-2A0A087WT02 112 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 TRGV4A0A0C4DH28 118 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 FHL2Q14192 279 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 FAM222AQ5U5X8 452 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 PMCHL2Q9BQD1 86 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 PRO1933Q9H354 126 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
USP39-207ENST00000450066 Q6ZN92 141 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 ZNRF2Q8NHG8 242 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
USP39-207ENST00000450066 ZMAT4Q9H898 229 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 DKK2Q9UBU2 259 aa10.11□□□□□ -0.79
USP39-207ENST00000450066 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
USP39-207ENST00000450066 RPL39P62891 51 aaKnown RBP10.1□□□□□ -0.79
USP39-207ENST00000450066 C20orf203Q8NBC4 194 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms