RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TRBV6-1A0A0K0K1D8 114 aa9.43□□□□□ -0.9
UBE3B-204ENST00000449510 PRM2P04554 102 aa9.43□□□□□ -0.9
UBE3B-204ENST00000449510 C20orf173Q96LM9 149 aa9.43□□□□□ -0.9
UBE3B-204ENST00000449510 CCDC140Q96MF4 163 aa9.43□□□□□ -0.9
UBE3B-204ENST00000449510 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
UBE3B-204ENST00000449510 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
UBE3B-204ENST00000449510 DEFB131AP59861 70 aa9.42□□□□□ -0.9
UBE3B-204ENST00000449510 MRGPRG-AS1Q2M3A8 158 aa9.42□□□□□ -0.9
UBE3B-204ENST00000449510 LINC00158P58513 81 aa9.42□□□□□ -0.9
UBE3B-204ENST00000449510 NPBQ8NG41 125 aa9.42□□□□□ -0.9
UBE3B-204ENST00000449510 MUC3AQ02505 3323 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 IGFL3Q6UXB1 125 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 CCDC179H3BU77 68 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 Q6ZSV7 163 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 TMEM141Q96I45 108 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 TRAV12-1A0A0B4J245 112 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 UBE2E1P51965 193 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 CFHR3Q02985 330 aa9.41□□□□□ -0.9
UBE3B-204ENST00000449510 MRPS12O15235 138 aaKnown RBP9.4□□□□□ -0.9
UBE3B-204ENST00000449510 TCTEX1D4Q5JR98 221 aa9.4□□□□□ -0.9
UBE3B-204ENST00000449510 FAM236AA0A1B0GUQ0 79 aa9.4□□□□□ -0.9
UBE3B-204ENST00000449510 FAM236BA0A1B0GV22 79 aa9.4□□□□□ -0.9
UBE3B-204ENST00000449510 I3L3M4 83 aa9.4□□□□□ -0.9
UBE3B-204ENST00000449510 TRGV1A0A0A0MS02 117 aa9.4□□□□□ -0.91
UBE3B-204ENST00000449510 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.91
UBE3B-204ENST00000449510 NDUFV3P56181 108 aaKnown RBP9.4□□□□□ -0.91
UBE3B-204ENST00000449510 TMEM101Q96IK0 257 aa9.4□□□□□ -0.91
UBE3B-204ENST00000449510 XCL2Q9UBD3 114 aa9.4□□□□□ -0.91
UBE3B-204ENST00000449510 ZNF580Q9UK33 172 aa9.4□□□□□ -0.91
UBE3B-204ENST00000449510 OOSP1A8MZH6 123 aa9.39□□□□□ -0.91
UBE3B-204ENST00000449510 PFN2P35080 140 aa9.39□□□□□ -0.91
UBE3B-204ENST00000449510 CENPVL3A0A0U1RRI6 287 aa9.39□□□□□ -0.91
UBE3B-204ENST00000449510 PAX4O43316 350 aa9.39□□□□□ -0.91
UBE3B-204ENST00000449510 HIST2H2BDQ6DRA6 164 aa9.39□□□□□ -0.91
UBE3B-204ENST00000449510 ACANP16112 2415 aa9.38□□□□□ -0.91
UBE3B-204ENST00000449510 TRGV2A0A075B6R0 118 aa9.38□□□□□ -0.91
UBE3B-204ENST00000449510 TINCRA0A1B0GVN0 87 aa9.38□□□□□ -0.91
UBE3B-204ENST00000449510 C9orf47Q6ZRZ4 202 aa9.38□□□□□ -0.91
UBE3B-204ENST00000449510 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
UBE3B-204ENST00000449510 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
UBE3B-204ENST00000449510 TRGV11A0A075B6L2 103 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 Q9H8V8 135 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 LRBAP50851 2863 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 PROK1P58294 105 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 ZNRF2Q8NHG8 242 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 YAE1D1Q9NRH1 226 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 F8W735 103 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-204ENST00000449510 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 PIMREGQ9BSJ6 248 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 ICOSQ9Y6W8 199 aa9.37□□□□□ -0.91
UBE3B-204ENST00000449510 SLC25A29Q8N8R3 303 aa9.36□□□□□ -0.91
UBE3B-204ENST00000449510 IGHG4P01861 327 aa9.36□□□□□ -0.91
UBE3B-204ENST00000449510 TSPEAR-AS2P59090 65 aa9.36□□□□□ -0.91
UBE3B-204ENST00000449510 ZFAND2AQ8N6M9 145 aa9.36□□□□□ -0.91
UBE3B-204ENST00000449510 ZFAND3Q9H8U3 227 aa9.36□□□□□ -0.91
UBE3B-204ENST00000449510 CRLF1O75462 422 aa9.36□□□□□ -0.91
UBE3B-204ENST00000449510 CLPSL1A2RUU4 121 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 TRIAP1O43715 76 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 PRB1P04280 392 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 SMCPP49901 116 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-204ENST00000449510 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 COL12A1Q99715 3063 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 IGKV3D-7A0A0C4DH55 119 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 NDUFA4O00483 81 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 CCL19Q99731 98 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 RHODO00212 210 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 LEPROTO15243 131 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 IGHV4-38-2P0DP08 117 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 EDN2P20800 178 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 FAM223AQ8IWN6 122 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 ZMAT4Q9H898 229 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 Q9HAA7 133 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 DOPEY1Q5JWR5 2465 aa9.35□□□□□ -0.91
UBE3B-204ENST00000449510 RAI1Q7Z5J4 1906 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-204ENST00000449510 LY6LH3BQJ8 138 aa9.34□□□□□ -0.91
UBE3B-204ENST00000449510 ZNF462Q96JM2 2506 aa9.34□□□□□ -0.91
UBE3B-204ENST00000449510 IGHV3-30P01768 117 aa9.34□□□□□ -0.92
UBE3B-204ENST00000449510 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.92
UBE3B-204ENST00000449510 Q8NA96 180 aa9.34□□□□□ -0.92
UBE3B-204ENST00000449510 EPG5Q9HCE0 2579 aa9.34□□□□□ -0.92
UBE3B-204ENST00000449510 BAALC-AS2P0C853 105 aa9.33□□□□□ -0.92
UBE3B-204ENST00000449510 NXPH4O95158 308 aa9.33□□□□□ -0.92
UBE3B-204ENST00000449510 IGHV1-69DA0A0B4J2H0 117 aa9.33□□□□□ -0.92
UBE3B-204ENST00000449510 A0A0J9YXY3 114 aa9.33□□□□□ -0.92
UBE3B-204ENST00000449510 CRPP02741 224 aa9.33□□□□□ -0.92
UBE3B-204ENST00000449510 ATP6V0E2Q8NHE4 81 aa9.33□□□□□ -0.92
UBE3B-204ENST00000449510 USMG5Q96IX5 58 aa9.33□□□□□ -0.92
UBE3B-204ENST00000449510 PCSK5Q92824 1860 aa9.32□□□□□ -0.92
UBE3B-204ENST00000449510 DMXL1Q9Y485 3027 aa9.32□□□□□ -0.92
UBE3B-204ENST00000449510 RNASE3P12724 160 aaKnown RBP9.32□□□□□ -0.92
UBE3B-204ENST00000449510 PIP4P1Q86T03 277 aa9.32□□□□□ -0.92
UBE3B-204ENST00000449510 COL4A2P08572 1712 aa9.32□□□□□ -0.92
UBE3B-204ENST00000449510 IGLV2-18A0A075B6J9 118 aa9.32□□□□□ -0.92
UBE3B-204ENST00000449510 TRBV10-2A0A0K0K1G8 114 aa9.32□□□□□ -0.92
UBE3B-204ENST00000449510 DMDP11532 3685 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms