RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 SNRPD3P62318 126 aaKnown RBP2.22□□□□□ -2.05
CHD9-203ENST00000447540 DEFB118Q96PH6 123 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 CEP350Q5VT06 3117 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 IGKV1OR2-108A0A075B7D4 117 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 TRAV12-3A0A0B4J271 114 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 RNF185Q96GF1 192 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 IGLV2-18A0A075B6J9 118 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 H3BPC8 53 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 CLPSP04118 112 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 LPAL2Q16609 132 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 OXLD1Q5BKU9 147 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 PATE2Q6UY27 113 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 SERTAD4-AS1Q5TG53 156 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 C17orf82Q86X59 251 aaPredicted RBP2.22□□□□□ -2.05
CHD9-203ENST00000447540 A0A096LPE4 126 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 A0A1W2PPZ6 126 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 HOXD3P31249 432 aaPredicted RBP2.22□□□□□ -2.05
CHD9-203ENST00000447540 TMEM92Q6UXU6 159 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 ZNF491Q8N8L2 437 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 C2orf48Q96LS8 159 aa2.22□□□□□ -2.05
CHD9-203ENST00000447540 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.05
CHD9-203ENST00000447540 POLR2KP53803 58 aaKnown RBP2.21□□□□□ -2.06
CHD9-203ENST00000447540 HAMPP81172 84 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 WT1-ASQ06250 92 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 Q6ZVQ6 151 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 IGKV1-17P01599 117 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 FHL3Q13643 280 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 FGFBP3Q8TAT2 258 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 FAM110DQ8TAY7 271 aaPredicted RBP2.21□□□□□ -2.06
CHD9-203ENST00000447540 RMI2Q96E14 147 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 FAM19A4Q96LR4 140 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 HCP5Q6MZN7 132 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 C3orf56Q8N813 242 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 KLHL30-AS1Q8NEE0 82 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 DPM3Q9P2X0 92 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 ABCA12Q86UK0 2595 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 IGLV2-11P01706 119 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 NBL1P41271 181 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 RNF144BQ7Z419 303 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 KAAG1Q9UBP8 84 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 IGKV3D-7A0A0C4DH55 119 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 IGHV3-13P01766 116 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 TMEM254Q8TBM7 123 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 TTTY13Q9BZ97 58 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 BPESC1Q9GZL8 116 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 SPRR3Q9UBC9 169 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 A0A087X002 238 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 IGHV5-51A0A0C4DH38 117 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 IGIPA6NJ69 53 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 CGB3P0DN86 165 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 CGB7P0DN87 165 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 RNASE4P34096 147 aaKnown RBP2.21□□□□□ -2.06
CHD9-203ENST00000447540 CD177Q8N6Q3 437 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 PSMG3-AS1Q96PY0 264 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 EPG5Q9HCE0 2579 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 SMKR1H3BMG3 65 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 EPM2AB3EWF7 344 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 PAX4O43316 350 aa2.21□□□□□ -2.06
CHD9-203ENST00000447540 TRAV23DV6A0A075B6W5 121 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 LY6LH3BQJ8 138 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 LINC00322Q6ZN03 302 aaPredicted RBP2.2□□□□□ -2.06
CHD9-203ENST00000447540 LCA10Q71F78 164 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 LINC00308Q8TCZ7 52 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 SND1-IT1Q9HBX3 110 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 IBA57-AS1B1ANH7 110 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 CCL21O00585 134 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 MINOS1Q5TGZ0 78 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 MINOS1-NBL1R4GNA1 71 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 H7BZZ5 65 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 PMS2CLQ68D20 193 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 F8WEM9 126 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 COL4A1P02462 1669 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 PATE4P0C8F1 98 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 FXYD7P58549 80 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 Q1T7F1 81 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 IGKV1D-37A0A075B6S9 117 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 TRBV10-1A0A0K0K1A3 114 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 CGB1A6NKQ9 187 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 SAA4P35542 130 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 C14orf178Q8N769 122 aaPredicted RBP2.2□□□□□ -2.06
CHD9-203ENST00000447540 CELA1Q9UNI1 258 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 FASNP49327 2511 aaKnown RBP2.2□□□□□ -2.06
CHD9-203ENST00000447540 EFNA2O43921 213 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 Q5XG85 94 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 CMC4P56277 68 aaPredicted RBP2.2□□□□□ -2.06
CHD9-203ENST00000447540 H3BUA1 57 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 USMG5Q96IX5 58 aa2.2□□□□□ -2.06
CHD9-203ENST00000447540 C19orf84I3L1E1 186 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 MRGPRG-AS1Q2M3A8 158 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 hDV103S1A0JD37 113 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 PRYO14603 147 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 IGKV3-15P01624 115 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 Q8N6K4 173 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 SMAD5-AS1Q9Y6J3 95 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 PIEZO2Q9H5I5 2752 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 LOC100131303A0A0U1RQF7 123 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 HILS1P60008 231 aa2.19□□□□□ -2.06
CHD9-203ENST00000447540 Q6ZPA2 131 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms