RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 A0A1B0GV50 99 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 TRBV6-4A0A1B0GX49 114 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 KRBOX1C9JBD0 128 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 SH2D1AO60880 128 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 LTAP01374 205 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 RHOHQ15669 191 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 ZFP69Q49AA0 526 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 C14orf177Q52M58 125 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 ZNF506Q5JVG8 444 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 DNLZQ5SXM8 178 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 DAZ4Q86SG3 579 aaKnown RBP4.56□□□□□ -1.68
LRRC28-203ENST00000447360 TCTE3Q8IZS6 198 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 FAM213BQ8TBF2 198 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 FMC1Q96HJ9 113 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 MLST8Q9BVC4 326 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 DPH3P1Q9H4G8 78 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 JPT2Q9H910 190 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 DAZ3Q9NR90 486 aaKnown RBP4.56□□□□□ -1.68
LRRC28-203ENST00000447360 Q9UF83 564 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 LPAP08519 4548 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 IGKV2D-24A0A075B6R9 120 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 A4D1N5 150 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 GRIFINA4D1Z8 144 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 M0R036 132 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 ARMS2P0C7Q2 107 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 TPT1P13693 172 aaKnown RBP4.55□□□□□ -1.68
LRRC28-203ENST00000447360 EIF5AP63241 154 aaKnown RBP4.55□□□□□ -1.68
LRRC28-203ENST00000447360 PIK3CD-AS1Q5SR53 167 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 UFSP1Q6NVU6 142 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 LINC01600Q96MT4 127 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 TCEAL7Q9BRU2 100 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 SAMD10Q9BYL1 202 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 IL36BQ9NZH7 164 aa4.55□□□□□ -1.68
LRRC28-203ENST00000447360 A0A087WWC5 75 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 TRAV1-1A0A0B4J248 108 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 B4DEV8 164 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 PFDN1O60925 122 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 VPREB1P12018 145 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 S100A4P26447 101 aaKnown RBP4.54□□□□□ -1.68
LRRC28-203ENST00000447360 AKR1C3P42330 323 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 UBE2G1P62253 170 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 FAM162BQ5T6X4 162 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 ZFP2Q6ZN57 461 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 AKAP14Q86UN6 197 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 PARLQ9H300 379 aa4.54□□□□□ -1.68
LRRC28-203ENST00000447360 TMSB15BA0A087X1C1 80 aa4.53□□□□□ -1.68
LRRC28-203ENST00000447360 A8MWV9 139 aa4.53□□□□□ -1.68
LRRC28-203ENST00000447360 H3BVH4 76 aa4.53□□□□□ -1.68
LRRC28-203ENST00000447360 S100A9P06702 114 aaKnown RBP4.53□□□□□ -1.68
LRRC28-203ENST00000447360 MGST1P10620 155 aaKnown RBP4.53□□□□□ -1.68
LRRC28-203ENST00000447360 SULT1A2P50226 295 aa4.53□□□□□ -1.68
LRRC28-203ENST00000447360 ATRAIDQ6UW56 229 aa4.53□□□□□ -1.68
LRRC28-203ENST00000447360 BAGE2Q86Y30 109 aa4.53□□□□□ -1.68
LRRC28-203ENST00000447360 C9orf163Q8N9P6 203 aa4.53□□□□□ -1.68
LRRC28-203ENST00000447360 URGCP-MRPS24S4R325 110 aa4.53□□□□□ -1.68
LRRC28-203ENST00000447360 FAT4Q6V0I7 4981 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 LINC00694P0DN24 101 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 RAB5CP51148 216 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 RPL19P84098 196 aaKnown RBP4.52□□□□□ -1.69
LRRC28-203ENST00000447360 ELOBQ15370 118 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 SLC51BQ86UW2 128 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 C14orf178Q8N769 122 aaPredicted RBP4.52□□□□□ -1.69
LRRC28-203ENST00000447360 C11orf52Q96A22 123 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 SFRP2Q96HF1 295 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 DNAJC30Q96LL9 226 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 DERL1Q9BUN8 251 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 GNG13Q9P2W3 67 aa4.52□□□□□ -1.69
LRRC28-203ENST00000447360 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 A0A0J9YXV3 536 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 PANO1I0J062 215 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 RPL35P42766 123 aaKnown RBP4.51□□□□□ -1.69
LRRC28-203ENST00000447360 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 Q0VG73 95 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 GAGE1Q13065 139 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 GAGE4Q13068 117 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 GAGE5Q13069 117 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 CIRBPQ14011 172 aaKnown RBP4.51□□□□□ -1.69
LRRC28-203ENST00000447360 EIF5AL1Q6IS14 154 aaKnown RBP4.51□□□□□ -1.69
LRRC28-203ENST00000447360 SDIM1Q6ZPB5 146 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 NIT1Q86X76 327 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 C9orf62Q8N4C0 152 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 UBE2WQ96B02 151 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 CHCHD7Q9BUK0 85 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 MANBALQ9NQG1 85 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 KLK12Q9UKR0 248 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 PHLDA3Q9Y5J5 127 aa4.51□□□□□ -1.69
LRRC28-203ENST00000447360 A0A087WX48 190 aa4.5□□□□□ -1.69
LRRC28-203ENST00000447360 RAB19A4D1S5 217 aa4.5□□□□□ -1.69
LRRC28-203ENST00000447360 M0R381 172 aa4.5□□□□□ -1.69
LRRC28-203ENST00000447360 SNAI2O43623 268 aa4.5□□□□□ -1.69
LRRC28-203ENST00000447360 CXCL1P09341 107 aa4.5□□□□□ -1.69
LRRC28-203ENST00000447360 OR10AG1Q8NH19 301 aa4.5□□□□□ -1.69
LRRC28-203ENST00000447360 RNF185Q96GF1 192 aa4.5□□□□□ -1.69
LRRC28-203ENST00000447360 TRBV20OR9-2A0A075B6H5 130 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 MUC21A0A0G2JKD1 596 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 A0A0U1RQV1 116 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 MUC21A0A140T8X8 626 aa4.49□□□□□ -1.69
LRRC28-203ENST00000447360 A0A1B0GVG6 124 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms