RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 UBE2D3P61077 147 aa8.1□□□□□ -1.11
RFC4-208ENST00000447345 UBE2D2P62837 147 aa8.1□□□□□ -1.11
RFC4-208ENST00000447345 Q8N3U1 123 aa8.1□□□□□ -1.11
RFC4-208ENST00000447345 TNFRSF18Q9Y5U5 241 aa8.1□□□□□ -1.11
RFC4-208ENST00000447345 HECTD4Q9Y4D8 3996 aa8.09□□□□□ -1.11
RFC4-208ENST00000447345 TRAV26-2A0A0B4J265 109 aa8.09□□□□□ -1.11
RFC4-208ENST00000447345 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
RFC4-208ENST00000447345 WDR73Q6P4I2 378 aa8.09□□□□□ -1.11
RFC4-208ENST00000447345 SMIM15Q7Z3B0 74 aa8.09□□□□□ -1.11
RFC4-208ENST00000447345 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
RFC4-208ENST00000447345 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
RFC4-208ENST00000447345 H7C1H1 209 aa8.08□□□□□ -1.12
RFC4-208ENST00000447345 M0QY20 66 aa8.08□□□□□ -1.12
RFC4-208ENST00000447345 TNP2Q05952 138 aa8.08□□□□□ -1.12
RFC4-208ENST00000447345 GFRA4Q9GZZ7 299 aa8.08□□□□□ -1.12
RFC4-208ENST00000447345 PKD1P98161 4303 aa8.07□□□□□ -1.12
RFC4-208ENST00000447345 A0A087WWC5 75 aa8.07□□□□□ -1.12
RFC4-208ENST00000447345 LINC01556Q5JQF7 62 aa8.07□□□□□ -1.12
RFC4-208ENST00000447345 RASL11AQ6T310 242 aa8.07□□□□□ -1.12
RFC4-208ENST00000447345 NUP35Q8NFH5 326 aa8.07□□□□□ -1.12
RFC4-208ENST00000447345 BIRC6Q9NR09 4857 aa8.06□□□□□ -1.12
RFC4-208ENST00000447345 FAM231BA6NCW3 169 aa8.06□□□□□ -1.12
RFC4-208ENST00000447345 COMMD7Q86VX2 200 aa8.06□□□□□ -1.12
RFC4-208ENST00000447345 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.06□□□□□ -1.12
RFC4-208ENST00000447345 DEFB104AQ8WTQ1 72 aa8.06□□□□□ -1.12
RFC4-208ENST00000447345 Q9HAA7 133 aa8.06□□□□□ -1.12
RFC4-208ENST00000447345 NAT8BQ9UHF3 227 aa8.06□□□□□ -1.12
RFC4-208ENST00000447345 TRBV6-8A0A0A6YYG3 113 aa8.05□□□□□ -1.12
RFC4-208ENST00000447345 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
RFC4-208ENST00000447345 RIGQ13278 110 aa8.05□□□□□ -1.12
RFC4-208ENST00000447345 C10orf126Q8N4M7 172 aa8.05□□□□□ -1.12
RFC4-208ENST00000447345 GATD1Q8NB37 220 aa8.05□□□□□ -1.12
RFC4-208ENST00000447345 RPL39LQ96EH5 51 aaKnown RBP8.05□□□□□ -1.12
RFC4-208ENST00000447345 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
RFC4-208ENST00000447345 URGCP-MRPS24S4R325 110 aa8.05□□□□□ -1.12
RFC4-208ENST00000447345 SMIM27A0A1W2PRY6 76 aa8.04□□□□□ -1.12
RFC4-208ENST00000447345 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
RFC4-208ENST00000447345 DAZ4Q86SG3 579 aaKnown RBP8.04□□□□□ -1.12
RFC4-208ENST00000447345 NIT1Q86X76 327 aa8.04□□□□□ -1.12
RFC4-208ENST00000447345 CHCHD5Q9BSY4 110 aa8.04□□□□□ -1.12
RFC4-208ENST00000447345 NIT2Q9NQR4 276 aa8.04□□□□□ -1.12
RFC4-208ENST00000447345 DAZ3Q9NR90 486 aaKnown RBP8.04□□□□□ -1.12
RFC4-208ENST00000447345 A0A087WX48 190 aa8.03□□□□□ -1.12
RFC4-208ENST00000447345 K7EP13 123 aa8.03□□□□□ -1.12
RFC4-208ENST00000447345 CAMPP49913 170 aa8.03□□□□□ -1.12
RFC4-208ENST00000447345 PNRC1Q12796 327 aaPredicted RBP8.03□□□□□ -1.12
RFC4-208ENST00000447345 MRPL54Q6P161 138 aaKnown RBP8.03□□□□□ -1.12
RFC4-208ENST00000447345 UQCC3Q6UW78 93 aa8.03□□□□□ -1.12
RFC4-208ENST00000447345 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
RFC4-208ENST00000447345 NTM-AS1Q6ZSK4 140 aa8.03□□□□□ -1.12
RFC4-208ENST00000447345 AMN1Q8IY45 258 aa8.03□□□□□ -1.12
RFC4-208ENST00000447345 TMEM191AQ9H0A3 160 aa8.03□□□□□ -1.12
RFC4-208ENST00000447345 TRBV25-1A0A075B6N4 114 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 IBA57-AS1B1ANH7 110 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 F8W036 122 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 GAS8-AS1O95177 125 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 NCR2O95944 276 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 BTF3P20290 206 aaKnown RBP8.02□□□□□ -1.13
RFC4-208ENST00000447345 KCNIP4Q6PIL6 250 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 NFE4Q86UQ8 179 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 RNF185Q96GF1 192 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 DNAH11Q96DT5 4516 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 PKHD1P08F94 4074 aa8.02□□□□□ -1.13
RFC4-208ENST00000447345 IGHV1-24A0A0C4DH33 117 aa8.01□□□□□ -1.13
RFC4-208ENST00000447345 TMEM218A2RU14 115 aa8.01□□□□□ -1.13
RFC4-208ENST00000447345 SMKR1H3BMG3 65 aa8.01□□□□□ -1.13
RFC4-208ENST00000447345 PPP1R2P9O14990 202 aa8.01□□□□□ -1.13
RFC4-208ENST00000447345 GAGE6Q13070 117 aa8.01□□□□□ -1.13
RFC4-208ENST00000447345 MPV17L2Q567V2 206 aa8.01□□□□□ -1.13
RFC4-208ENST00000447345 TMEM97Q5BJF2 176 aa8.01□□□□□ -1.13
RFC4-208ENST00000447345 KLK12Q9UKR0 248 aa8.01□□□□□ -1.13
RFC4-208ENST00000447345 PSCAO43653 123 aa8□□□□□ -1.13
RFC4-208ENST00000447345 MT-ND4LP03901 98 aa8□□□□□ -1.13
RFC4-208ENST00000447345 RAB4AP20338 218 aa8□□□□□ -1.13
RFC4-208ENST00000447345 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
RFC4-208ENST00000447345 Q8N976 141 aa8□□□□□ -1.13
RFC4-208ENST00000447345 SDHAF1A6NFY7 115 aa7.99□□□□□ -1.13
RFC4-208ENST00000447345 AMTP48728 403 aa7.99□□□□□ -1.13
RFC4-208ENST00000447345 HBBP68871 147 aa7.99□□□□□ -1.13
RFC4-208ENST00000447345 COTL1Q14019 142 aa7.99□□□□□ -1.13
RFC4-208ENST00000447345 LAGE3Q14657 143 aa7.99□□□□□ -1.13
RFC4-208ENST00000447345 UBE2WQ96B02 151 aa7.99□□□□□ -1.13
RFC4-208ENST00000447345 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
RFC4-208ENST00000447345 IQCJQ1A5X6 159 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 MRPL51Q4U2R6 128 aaKnown RBP7.98□□□□□ -1.13
RFC4-208ENST00000447345 ATRAIDQ6UW56 229 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 CLPSL2Q6UWE3 100 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 SPATA12Q7Z6I5 190 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 FRZBQ92765 325 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 ANAPC16Q96DE5 110 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 MRAP2Q96G30 205 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 TMEM243Q9BU79 118 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 CHCHD7Q9BUK0 85 aa7.98□□□□□ -1.13
RFC4-208ENST00000447345 DYNC1H1Q14204 4646 aaKnown RBP7.98□□□□□ -1.13
RFC4-208ENST00000447345 TRAV8-3A0A0A6YYJ7 113 aa7.97□□□□□ -1.13
RFC4-208ENST00000447345 A0A1B0GW15 77 aa7.97□□□□□ -1.13
RFC4-208ENST00000447345 A0A1B0GXF2 115 aa7.97□□□□□ -1.13
RFC4-208ENST00000447345 LINC00862A6NCI5 91 aa7.97□□□□□ -1.13
RFC4-208ENST00000447345 UBE2L6O14933 153 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms