RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 PSMB8P28062 276 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 UBE2AP49459 152 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 LYZP61626 148 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 ZNF846Q147U1 533 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 YPEL4Q96NS1 127 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 VWFP04275 2813 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 TNCP24821 2201 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 CREBL2O60519 120 aaPredicted RBP4.34□□□□□ -1.71
MCF2-206ENST00000446225 NDUFB6O95139 128 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 PRH1P02810 166 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 TRGC2P03986 189 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 SCGB1C2P0DMR2 95 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 RPL27AP46776 148 aaKnown RBP4.34□□□□□ -1.71
MCF2-206ENST00000446225 SUPT4H1P63272 117 aaKnown RBP4.34□□□□□ -1.71
MCF2-206ENST00000446225 MPV17L2Q567V2 206 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 LCN15Q6UWW0 184 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 Q8N9P0 234 aaPredicted RBP4.34□□□□□ -1.71
MCF2-206ENST00000446225 SCGB1C1Q8TD33 95 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 SPIN2AQ99865 258 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 SPIN2BQ9BPZ2 258 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 MRPL32Q9BYC8 188 aaKnown RBP4.34□□□□□ -1.71
MCF2-206ENST00000446225 RPRMQ9NS64 109 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 ZNF355PQ9NSJ1 428 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 PKD1L1Q8TDX9 2849 aa4.34□□□□□ -1.72
MCF2-206ENST00000446225 A8MUN3 132 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 LYRM1O43325 122 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 DEDDO75618 318 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 DEFA5Q01523 94 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 HIGD2BQ4VC39 106 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 TTC9CQ8N5M4 171 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 MYOZ3Q8TDC0 251 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 C2orf50Q96LR7 162 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 MDFICQ9P1T7 246 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 ZNF706Q9Y5V0 76 aaPredicted RBP4.33□□□□□ -1.72
MCF2-206ENST00000446225 WNK1Q9H4A3 2382 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 IGHV3-66A0A0C4DH42 116 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 IGLC7A0M8Q6 106 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 LGALS9O00182 355 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 LST1O00453 97 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 IGHV3-11P01762 117 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 TRGV3P03979 118 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 DEFB136Q30KP8 78 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 FAM74A1Q5RGS3 127 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 LYZL2Q7Z4W2 148 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 C3orf22Q8N5N4 141 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 ZNF709Q8N972 641 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 TYMSOSQ8TAI1 123 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 LINC00052Q96N35 136 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 WDR61Q9GZS3 305 aaKnown RBP4.33□□□□□ -1.72
MCF2-206ENST00000446225 NDUFA4L2Q9NRX3 87 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 TMEM14BQ9NUH8 114 aa4.33□□□□□ -1.72
MCF2-206ENST00000446225 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 SFT2D2O95562 160 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 INSL3P51460 131 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 AKR1C2P52895 323 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 FOXA3P55318 350 aaPredicted RBP4.32□□□□□ -1.72
MCF2-206ENST00000446225 LINC00313P59037 77 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 WT1-ASQ06250 92 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 SPINK9Q5DT21 86 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 ZC2HC1AQ96GY0 325 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 MIEN1Q9BRT3 115 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 FKBP11Q9NYL4 201 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 FUT9Q9Y231 359 aa4.32□□□□□ -1.72
MCF2-206ENST00000446225 TET2Q6N021 2002 aaPredicted RBP4.32□□□□□ -1.72
MCF2-206ENST00000446225 TRBV20OR9-2A0A075B6H5 130 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 B4DEV8 164 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 H3BUA1 57 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 SPINK8P0C7L1 97 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 ATP5G2Q06055 141 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 C4orf3Q8WVX3 66 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 LSM10Q969L4 123 aaKnown RBP4.31□□□□□ -1.72
MCF2-206ENST00000446225 FAM236AA0A1B0GUQ0 79 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 FAM236BA0A1B0GV22 79 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 UBE2L6O14933 153 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 DEFA4P12838 97 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 PRCDQ00LT1 54 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 KLK9Q2XQG4 91 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 NMSQ5H8A3 153 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 EBLN2Q6P2I7 272 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 ZNF429Q86V71 674 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 WFDC9Q8NEX5 89 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 USMG5Q96IX5 58 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 KLK9Q9UKQ9 250 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 S4R3C0 116 aa4.31□□□□□ -1.72
MCF2-206ENST00000446225 NBEAL1Q6ZS30 2694 aa4.3□□□□□ -1.72
MCF2-206ENST00000446225 IGLV11-55A0A075B6I3 123 aa4.3□□□□□ -1.72
MCF2-206ENST00000446225 COX7A2LO14548 114 aa4.3□□□□□ -1.72
MCF2-206ENST00000446225 C15orf32Q32M92 178 aa4.3□□□□□ -1.72
MCF2-206ENST00000446225 C9orf129Q5T035 196 aaKnown RBP4.3□□□□□ -1.72
MCF2-206ENST00000446225 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
MCF2-206ENST00000446225 NOTCH3Q9UM47 2321 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 IGHV3-21A0A0B4J1V1 117 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 FAM223BA6NKX1 122 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms