RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ZNF295-AS1Q8N0V1 137 aa14.27□□□□□ -0.13
SHANK3-203ENST00000445220 SDIM1Q6ZPB5 146 aa14.27□□□□□ -0.13
SHANK3-203ENST00000445220 MRPL55Q7Z7F7 128 aaKnown RBP14.27□□□□□ -0.13
SHANK3-203ENST00000445220 GRNP28799 593 aaKnown RBP14.26□□□□□ -0.13
SHANK3-203ENST00000445220 HIGD2BQ4VC39 106 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 HIST2H2BDQ6DRA6 164 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 NDUFA7O95182 113 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 UBE2BP63146 152 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 MDFICQ9P1T7 246 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 E7EUB6 86 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 CHKB-CPT1BH3BT56 60 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 P0DMU3 169 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 FAM231AP0DMU4 169 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 FAM231CP0DMU5 169 aa14.26□□□□□ -0.13
SHANK3-203ENST00000445220 IGKV1D-37A0A075B6S9 117 aa14.25□□□□□ -0.13
SHANK3-203ENST00000445220 ATP5EP2Q5VTU8 51 aa14.25□□□□□ -0.13
SHANK3-203ENST00000445220 NACAE9PAV3 2078 aa14.25□□□□□ -0.13
SHANK3-203ENST00000445220 DEFB121Q5J5C9 76 aa14.25□□□□□ -0.13
SHANK3-203ENST00000445220 NEXN-AS1Q8NBZ9 246 aa14.25□□□□□ -0.13
SHANK3-203ENST00000445220 TRBV7-3A0A075B6L6 115 aa14.25□□□□□ -0.13
SHANK3-203ENST00000445220 IGKV2D-26A0A0A0MRZ7 120 aa14.25□□□□□ -0.13
SHANK3-203ENST00000445220 V9GYY9 64 aa14.25□□□□□ -0.13
SHANK3-203ENST00000445220 FAM240AA0A1B0GVK7 77 aa14.24□□□□□ -0.13
SHANK3-203ENST00000445220 CLPSL1A2RUU4 121 aa14.24□□□□□ -0.13
SHANK3-203ENST00000445220 AJUBAQ96IF1 538 aa14.24□□□□□ -0.13
SHANK3-203ENST00000445220 IMUPQ9GZP8 106 aa14.24□□□□□ -0.13
SHANK3-203ENST00000445220 CXCL5P42830 114 aa14.24□□□□□ -0.13
SHANK3-203ENST00000445220 CAMK2N2Q96S95 79 aa14.24□□□□□ -0.13
SHANK3-203ENST00000445220 NDUFC2-KCTD14E9PQ53 114 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 NDUFB1O75438 58 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 DEFB112Q30KQ8 113 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 PKIGQ9Y2B9 76 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 C2orf91Q6ZV80 131 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 MED13Q9UHV7 2174 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 A0A0J9YY99 117 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 MAPKAPK5-AS1Q8N8E1 139 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 CLUHP3Q96NS8 147 aa14.23□□□□□ -0.13
SHANK3-203ENST00000445220 TRBV30A0A0K0K1B3 111 aa14.22□□□□□ -0.13
SHANK3-203ENST00000445220 NCR3O14931 201 aa14.22□□□□□ -0.13
SHANK3-203ENST00000445220 PRORYQ9H606 182 aa14.22□□□□□ -0.13
SHANK3-203ENST00000445220 DYSFO75923 2080 aa14.22□□□□□ -0.13
SHANK3-203ENST00000445220 ZNF80P51504 273 aaPredicted RBP14.22□□□□□ -0.13
SHANK3-203ENST00000445220 MYO18BQ8IUG5 2567 aa14.21□□□□□ -0.13
SHANK3-203ENST00000445220 KIF26AQ9ULI4 1882 aaPredicted RBP14.21□□□□□ -0.13
SHANK3-203ENST00000445220 DIRC1Q969H9 104 aa14.21□□□□□ -0.13
SHANK3-203ENST00000445220 MPLKIPQ8TAP9 179 aa14.21□□□□□ -0.13
SHANK3-203ENST00000445220 C16orf74Q96GX8 76 aa14.21□□□□□ -0.13
SHANK3-203ENST00000445220 ATRXP46100 2492 aa14.21□□□□□ -0.14
SHANK3-203ENST00000445220 EP400Q96L91 3159 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 IGHV4-59P01825 116 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 IGKV2D-24A0A075B6R9 120 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 PROP1O75360 226 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 CFAP126Q5VTH2 177 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 IGLV10-54A0A075B6I4 117 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 SEM1Q6ZVN7 128 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 LTBP2Q14767 1821 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 GYPEP15421 78 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 ARHGAP21Q5T5U3 1957 aa14.2□□□□□ -0.14
SHANK3-203ENST00000445220 IGHV4-61A0A0C4DH41 118 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 A0A0U1RQV1 116 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 A0A1W2PNU3 283 aaPredicted RBP14.19□□□□□ -0.14
SHANK3-203ENST00000445220 Q8N9W7 124 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 CCDC179H3BU77 68 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 TRIAP1O43715 76 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 IGHV3-33P01772 117 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 MRPS12O15235 138 aaKnown RBP14.19□□□□□ -0.14
SHANK3-203ENST00000445220 XGP55808 180 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 COL4A3Q01955 1670 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 APRG1Q8IVJ8 170 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 SPTSSBQ8NFR3 76 aa14.19□□□□□ -0.14
SHANK3-203ENST00000445220 IGLV1-47P01700 117 aa14.18□□□□□ -0.14
SHANK3-203ENST00000445220 DAZAP2Q15038 168 aaPredicted RBP14.18□□□□□ -0.14
SHANK3-203ENST00000445220 SERP2Q8N6R1 65 aa14.18□□□□□ -0.14
SHANK3-203ENST00000445220 FBXL19-AS1Q494R0 122 aa14.18□□□□□ -0.14
SHANK3-203ENST00000445220 SPG11Q96JI7 2443 aa14.17□□□□□ -0.14
SHANK3-203ENST00000445220 K7EMT4 169 aa14.17□□□□□ -0.14
SHANK3-203ENST00000445220 BRWD1-AS2P59051 145 aa14.17□□□□□ -0.14
SHANK3-203ENST00000445220 U3KQK5 164 aa14.17□□□□□ -0.14
SHANK3-203ENST00000445220 ADORA2A-AS1P86434 159 aa14.16□□□□□ -0.14
SHANK3-203ENST00000445220 Q6ZPA2 131 aa14.16□□□□□ -0.14
SHANK3-203ENST00000445220 FAM110AQ9BQ89 295 aa14.16□□□□□ -0.14
SHANK3-203ENST00000445220 C10orf105Q8TEF2 133 aa14.16□□□□□ -0.14
SHANK3-203ENST00000445220 DEFB113Q30KQ7 82 aa14.15□□□□□ -0.14
SHANK3-203ENST00000445220 ZNF843Q8N446 348 aa14.15□□□□□ -0.14
SHANK3-203ENST00000445220 NDUFA1O15239 70 aa14.15□□□□□ -0.14
SHANK3-203ENST00000445220 LRRC75A-AS1Q8N1F1 130 aa14.15□□□□□ -0.14
SHANK3-203ENST00000445220 RPL18AQ02543 176 aaKnown RBP14.15□□□□□ -0.14
SHANK3-203ENST00000445220 C2orf16Q68DN1 1984 aa14.15□□□□□ -0.14
SHANK3-203ENST00000445220 TMEM223A0PJW6 202 aa14.15□□□□□ -0.14
SHANK3-203ENST00000445220 BPY2O14599 106 aa14.14□□□□□ -0.15
SHANK3-203ENST00000445220 CEMP1Q6PRD7 247 aaPredicted RBP14.14□□□□□ -0.15
SHANK3-203ENST00000445220 ZNF22P17026 224 aaPredicted RBP14.14□□□□□ -0.15
SHANK3-203ENST00000445220 COX7CP15954 63 aa14.14□□□□□ -0.15
SHANK3-203ENST00000445220 FANCD2OSQ96PS1 177 aa14.14□□□□□ -0.15
SHANK3-203ENST00000445220 IGF2RP11717 2491 aa14.14□□□□□ -0.15
SHANK3-203ENST00000445220 IGHV4-30-2A0A087WSY4 118 aa14.13□□□□□ -0.15
SHANK3-203ENST00000445220 ENHOQ6UWT2 76 aa14.13□□□□□ -0.15
SHANK3-203ENST00000445220 ATP5EP56381 51 aaPredicted RBP14.13□□□□□ -0.15
SHANK3-203ENST00000445220 DEFB1P60022 68 aa14.13□□□□□ -0.15
SHANK3-203ENST00000445220 CCL24O00175 119 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms