RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 DAZ4Q86SG3 579 aaKnown RBP9.71□□□□□ -0.86
SSBP3-208ENST00000444533 NEXN-AS1Q8NBZ9 246 aa9.71□□□□□ -0.86
SSBP3-208ENST00000444533 NIT2Q9NQR4 276 aa9.71□□□□□ -0.86
SSBP3-208ENST00000444533 DAZ3Q9NR90 486 aaKnown RBP9.71□□□□□ -0.86
SSBP3-208ENST00000444533 K7EP13 123 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 M0QY20 66 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 ADCYAP1P18509 176 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 S100PP25815 95 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 CAMPP49913 170 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 LINC00315P59091 139 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 HBBP68871 147 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 ATP5L2Q7Z4Y8 100 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 URGCP-MRPS24S4R325 110 aa9.7□□□□□ -0.86
SSBP3-208ENST00000444533 PLECQ15149 4684 aaKnown RBP9.7□□□□□ -0.86
SSBP3-208ENST00000444533 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
SSBP3-208ENST00000444533 PPP1R17O96001 155 aa9.69□□□□□ -0.86
SSBP3-208ENST00000444533 LINC00694P0DN24 101 aa9.69□□□□□ -0.86
SSBP3-208ENST00000444533 UBE2D3P61077 147 aa9.69□□□□□ -0.86
SSBP3-208ENST00000444533 UBE2D2P62837 147 aa9.69□□□□□ -0.86
SSBP3-208ENST00000444533 MRPL54Q6P161 138 aaKnown RBP9.69□□□□□ -0.86
SSBP3-208ENST00000444533 MRAP2Q96G30 205 aa9.69□□□□□ -0.86
SSBP3-208ENST00000444533 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
SSBP3-208ENST00000444533 RHEBQ15382 184 aa9.68□□□□□ -0.86
SSBP3-208ENST00000444533 C10orf126Q8N4M7 172 aa9.68□□□□□ -0.86
SSBP3-208ENST00000444533 BTF3L4Q96K17 158 aa9.68□□□□□ -0.86
SSBP3-208ENST00000444533 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
SSBP3-208ENST00000444533 CARHSP1Q9Y2V2 147 aaKnown RBP9.68□□□□□ -0.86
SSBP3-208ENST00000444533 ALMS1Q8TCU4 4167 aa9.67□□□□□ -0.86
SSBP3-208ENST00000444533 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
SSBP3-208ENST00000444533 PKIAP61925 76 aa9.67□□□□□ -0.86
SSBP3-208ENST00000444533 C10orf91Q5T1B1 145 aa9.67□□□□□ -0.86
SSBP3-208ENST00000444533 SVBPQ8N300 66 aa9.67□□□□□ -0.86
SSBP3-208ENST00000444533 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
SSBP3-208ENST00000444533 Q9UF83 564 aa9.67□□□□□ -0.86
SSBP3-208ENST00000444533 KMT2CQ8NEZ4 4911 aaKnown RBP9.67□□□□□ -0.86
SSBP3-208ENST00000444533 SNAPINO95295 136 aa9.66□□□□□ -0.86
SSBP3-208ENST00000444533 APOC3P02656 99 aa9.66□□□□□ -0.86
SSBP3-208ENST00000444533 C1orf134Q5TEV5 83 aa9.66□□□□□ -0.86
SSBP3-208ENST00000444533 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
SSBP3-208ENST00000444533 AMN1Q8IY45 258 aa9.66□□□□□ -0.86
SSBP3-208ENST00000444533 RPS10P5Q9NQ39 176 aa9.66□□□□□ -0.86
SSBP3-208ENST00000444533 TMEM242Q9NWH2 141 aa9.66□□□□□ -0.86
SSBP3-208ENST00000444533 TRBV25-1A0A075B6N4 114 aa9.65□□□□□ -0.86
SSBP3-208ENST00000444533 A0A087WX48 190 aa9.65□□□□□ -0.86
SSBP3-208ENST00000444533 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.86
SSBP3-208ENST00000444533 DNAH10OSP0CZ25 163 aa9.65□□□□□ -0.86
SSBP3-208ENST00000444533 BTF3P20290 206 aaKnown RBP9.65□□□□□ -0.86
SSBP3-208ENST00000444533 RAB4AP20338 218 aa9.65□□□□□ -0.86
SSBP3-208ENST00000444533 COTL1Q14019 142 aa9.65□□□□□ -0.86
SSBP3-208ENST00000444533 CLRN3Q8NCR9 226 aa9.65□□□□□ -0.86
SSBP3-208ENST00000444533 ST20Q9HBF5 79 aa9.65□□□□□ -0.86
SSBP3-208ENST00000444533 LYSTQ99698 3801 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 C7orf77A4D0Y5 90 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 CKS2P33552 79 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 LINC01556Q5JQF7 62 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 FAM104BQ5XKR9 115 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 Q6ZR54 194 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
SSBP3-208ENST00000444533 IGHV1-24A0A0C4DH33 117 aa9.63□□□□□ -0.87
SSBP3-208ENST00000444533 PMCHP20382 165 aa9.63□□□□□ -0.87
SSBP3-208ENST00000444533 ELOBQ15370 118 aa9.63□□□□□ -0.87
SSBP3-208ENST00000444533 NFE4Q86UQ8 179 aa9.63□□□□□ -0.87
SSBP3-208ENST00000444533 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
SSBP3-208ENST00000444533 A0A1B0GXF2 115 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 UBE2L6O14933 153 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 PPBPP02775 128 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 RPL39LQ96EH5 51 aaKnown RBP9.62□□□□□ -0.87
SSBP3-208ENST00000444533 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
SSBP3-208ENST00000444533 TRBV6-5A0A0K0K1A5 114 aa9.61□□□□□ -0.87
SSBP3-208ENST00000444533 SDHAF1A6NFY7 115 aa9.61□□□□□ -0.87
SSBP3-208ENST00000444533 NCR2O95944 276 aa9.61□□□□□ -0.87
SSBP3-208ENST00000444533 AMTP48728 403 aa9.61□□□□□ -0.87
SSBP3-208ENST00000444533 MRPL51Q4U2R6 128 aaKnown RBP9.61□□□□□ -0.87
SSBP3-208ENST00000444533 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
SSBP3-208ENST00000444533 I3L3M4 83 aa9.6□□□□□ -0.87
SSBP3-208ENST00000444533 COX19Q49B96 90 aa9.6□□□□□ -0.87
SSBP3-208ENST00000444533 VCYO14598 125 aa9.59□□□□□ -0.87
SSBP3-208ENST00000444533 APCSP02743 223 aa9.59□□□□□ -0.87
SSBP3-208ENST00000444533 FCER1GP30273 86 aa9.59□□□□□ -0.87
SSBP3-208ENST00000444533 IQCJQ1A5X6 159 aa9.59□□□□□ -0.87
SSBP3-208ENST00000444533 NIT1Q86X76 327 aa9.59□□□□□ -0.87
SSBP3-208ENST00000444533 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
SSBP3-208ENST00000444533 KIR2DL4Q99706 377 aa9.59□□□□□ -0.87
SSBP3-208ENST00000444533 DNAH1Q9P2D7 4330 aa9.58□□□□□ -0.88
SSBP3-208ENST00000444533 SACSQ9NZJ4 4579 aa9.58□□□□□ -0.88
SSBP3-208ENST00000444533 D6R8Y8 96 aa9.58□□□□□ -0.88
SSBP3-208ENST00000444533 SMKR1H3BMG3 65 aa9.58□□□□□ -0.88
SSBP3-208ENST00000444533 TCAPO15273 167 aa9.58□□□□□ -0.88
SSBP3-208ENST00000444533 SUMO2P61956 95 aaKnown RBP9.58□□□□□ -0.88
SSBP3-208ENST00000444533 SLC7A5P1Q8MH63 180 aa9.58□□□□□ -0.88
SSBP3-208ENST00000444533 C20orf78Q9BR46 151 aa9.58□□□□□ -0.88
SSBP3-208ENST00000444533 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms