RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 A0A0J9YY99 117 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 COX6CP09669 75 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 EDDM3BP56851 147 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 SNRPFP62306 86 aaKnown RBP2.48□□□□□ -2.01
VPS50-206ENST00000443443 WFDC2Q14508 124 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 PMCHL1Q16048 86 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 PATE1Q8WXA2 126 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 LIMD2Q9BT23 127 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 MYO9BQ13459 2157 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 KIF14Q15058 1648 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 LRRIQ1Q96JM4 1722 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 PSME4Q14997 1843 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 KIF20BQ96Q89 1820 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 LAMB4A4D0S4 1761 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 TEX49A0A1B0GTD5 131 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 CHKB-CPT1BH3BT56 60 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 BCE1O60756 84 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 UBE2D1P51668 147 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 UBE2D3P61077 147 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 UBE2D2P62837 147 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 Q8N6K4 173 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 ODF3Q96PU9 254 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 UNC13BO14795 1591 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 DIP2BQ9P265 1576 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 MYO16Q9Y6X6 1858 aa2.47□□□□□ -2.01
VPS50-206ENST00000443443 COL11A1P12107 1806 aaPredicted RBP2.47□□□□□ -2.01
VPS50-206ENST00000443443 LAMB1P07942 1786 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 RGPD4Q7Z3J3 1758 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 SHROOM2Q13796 1616 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 MUC4Q99102 2169 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 PEAK1Q9H792 1746 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 H3BUT2 72 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 H7BZZ5 65 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 IGKV1-17P01599 117 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 ACYP1P07311 99 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 SPATA45Q537H7 98 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 VMO1Q7Z5L0 202 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 HIGD1BQ9P298 99 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 KIAA1549Q9HCM3 1950 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 MAP3K4Q9Y6R4 1608 aa2.46□□□□□ -2.02
VPS50-206ENST00000443443 NCOA2Q15596 1464 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 MYH8P13535 1937 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 TRAV22A0A0B4J277 110 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 TRBV6-4A0A1B0GX49 114 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 F2Z2F3 143 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 PPYP01298 95 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 IGHV3-30P01768 117 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 IGHV3-30-5P0DP03 117 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 CYSTM1Q9H1C7 97 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 KLK9Q9UKQ9 250 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 LAMB2P55268 1798 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 PLXNA2O75051 1894 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 ANK1P16157 1881 aa2.45□□□□□ -2.02
VPS50-206ENST00000443443 PRR14LQ5THK1 2151 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 ZC3H13Q5T200 1668 aaKnown RBP2.44□□□□□ -2.02
VPS50-206ENST00000443443 MUC22E2RYF6 1773 aaPredicted RBP2.44□□□□□ -2.02
VPS50-206ENST00000443443 UGGT2Q9NYU1 1516 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 TRPM7Q96QT4 1865 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 SDHAF1A6NFY7 115 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 ELOF1P60002 83 aaKnown RBP2.44□□□□□ -2.02
VPS50-206ENST00000443443 SSBP1Q04837 148 aaKnown RBP2.44□□□□□ -2.02
VPS50-206ENST00000443443 KLKP1Q107X0 134 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 TPRXLQ17RH7 258 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 HEPN1Q6WQI6 88 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 C18orf32Q8TCD1 76 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 DYNLRB1Q9NP97 96 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 NWD2Q9ULI1 1742 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 IQSEC2Q5JU85 1478 aa2.44□□□□□ -2.02
VPS50-206ENST00000443443 CUL9Q8IWT3 2517 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 EML5Q05BV3 1969 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 IGKV3-7A0A075B6H7 116 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 LOC285095A0A1B0GVY8 99 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 HIGD1CA8MV81 97 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 JMJD7-PLA2G4BH0Y9G9 81 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 ZNF56Q15929 161 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 Q5VV11 94 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 IGFL1Q6UW32 110 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 LINC00643Q86TS7 51 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 SPACA4Q8TDM5 124 aa2.43□□□□□ -2.02
VPS50-206ENST00000443443 CLTCQ00610 1675 aaKnown RBP2.43□□□□□ -2.02
VPS50-206ENST00000443443 BLMP54132 1417 aaPredicted RBP2.42□□□□□ -2.02
VPS50-206ENST00000443443 EEA1Q15075 1411 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 ABCC1P33527 1531 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 MAGI3Q5TCQ9 1506 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 RGPD3A6NKT7 1758 aaPredicted RBP2.42□□□□□ -2.02
VPS50-206ENST00000443443 TET3O43151 1660 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 TRBV25-1A0A075B6N4 114 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 TMEM14DPA8MWL7 114 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 H3BRN7 92 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 DNAL4O96015 105 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 C10orf55Q5SWW7 151 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 PRR9Q5T870 116 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 SFTA2Q6UW10 78 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 C20orf197Q8N268 126 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 LINC01600Q96MT4 127 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 LENEPQ9Y5L5 61 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 FREM3P0C091 2139 aa2.42□□□□□ -2.02
VPS50-206ENST00000443443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms