RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 UBE2D2P62837 147 aa8.73□□□□□ -1.01
LINC00642-202ENST00000442515 CLPSL2Q6UWE3 100 aa8.73□□□□□ -1.01
LINC00642-202ENST00000442515 GTSF1Q8WW33 167 aa8.73□□□□□ -1.01
LINC00642-202ENST00000442515 ACTR3CQ9C0K3 210 aaPredicted RBP8.73□□□□□ -1.01
LINC00642-202ENST00000442515 TRBV6-8A0A0A6YYG3 113 aa8.72□□□□□ -1.01
LINC00642-202ENST00000442515 hDV102S1A0JD36 115 aa8.72□□□□□ -1.01
LINC00642-202ENST00000442515 ZNF726P1Q15940 193 aa8.72□□□□□ -1.01
LINC00642-202ENST00000442515 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
LINC00642-202ENST00000442515 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
LINC00642-202ENST00000442515 A0A087WWL8 130 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 IGKV3D-20A0A0C4DH25 116 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 TRBV10-1A0A0K0K1A3 114 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 MAP1LC3B2A6NCE7 125 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 SLPIP03973 132 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 CDC34P49427 236 aaPredicted RBP8.71□□□□□ -1.02
LINC00642-202ENST00000442515 RPL36AP83881 106 aaKnown RBP8.71□□□□□ -1.02
LINC00642-202ENST00000442515 SMUG1Q53HV7 270 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 SPINK6Q6UWN8 80 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 SFT2D1Q8WV19 159 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 RPL36ALQ969Q0 106 aaKnown RBP8.71□□□□□ -1.02
LINC00642-202ENST00000442515 FAM210AQ96ND0 272 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 MAP1LC3BQ9GZQ8 125 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 SMDT1Q9H4I9 107 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 PRR34Q9NV39 138 aa8.71□□□□□ -1.02
LINC00642-202ENST00000442515 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
LINC00642-202ENST00000442515 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
LINC00642-202ENST00000442515 A0A1W2PPV4 95 aa8.7□□□□□ -1.02
LINC00642-202ENST00000442515 KRBOX1C9JBD0 128 aa8.7□□□□□ -1.02
LINC00642-202ENST00000442515 RAB24Q969Q5 203 aa8.7□□□□□ -1.02
LINC00642-202ENST00000442515 IL36BQ9NZH7 164 aa8.7□□□□□ -1.02
LINC00642-202ENST00000442515 TRBV7-3A0A075B6L6 115 aa8.69□□□□□ -1.02
LINC00642-202ENST00000442515 SERTM2A0A1B0GWG4 89 aa8.69□□□□□ -1.02
LINC00642-202ENST00000442515 H3BVH4 76 aa8.69□□□□□ -1.02
LINC00642-202ENST00000442515 IFNA1P01562 189 aa8.69□□□□□ -1.02
LINC00642-202ENST00000442515 TAGLN2P37802 199 aaKnown RBP8.69□□□□□ -1.02
LINC00642-202ENST00000442515 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
LINC00642-202ENST00000442515 AP5S1Q9NUS5 200 aa8.69□□□□□ -1.02
LINC00642-202ENST00000442515 PSG8Q9UQ74 426 aa8.69□□□□□ -1.02
LINC00642-202ENST00000442515 MUC21A0A0G2JKD1 596 aa8.68□□□□□ -1.02
LINC00642-202ENST00000442515 NDUFS6O75380 124 aaKnown RBP8.68□□□□□ -1.02
LINC00642-202ENST00000442515 TCRAP04437 139 aa8.68□□□□□ -1.02
LINC00642-202ENST00000442515 STAG3L2P0CL84 134 aa8.68□□□□□ -1.02
LINC00642-202ENST00000442515 STAG3L3P0CL85 134 aa8.68□□□□□ -1.02
LINC00642-202ENST00000442515 PKIAP61925 76 aa8.68□□□□□ -1.02
LINC00642-202ENST00000442515 PEA15Q15121 130 aa8.68□□□□□ -1.02
LINC00642-202ENST00000442515 LINC00269Q8N2A0 174 aa8.68□□□□□ -1.02
LINC00642-202ENST00000442515 IGLV10-54A0A075B6I4 117 aa8.67□□□□□ -1.02
LINC00642-202ENST00000442515 CXorf1O96002 111 aa8.67□□□□□ -1.02
LINC00642-202ENST00000442515 CCL20P78556 96 aa8.67□□□□□ -1.02
LINC00642-202ENST00000442515 PQLC2Q6ZP29 291 aa8.67□□□□□ -1.02
LINC00642-202ENST00000442515 PRNTQ86SH4 94 aa8.67□□□□□ -1.02
LINC00642-202ENST00000442515 OR10G8Q8NGN5 311 aa8.67□□□□□ -1.02
LINC00642-202ENST00000442515 MANBALQ9NQG1 85 aa8.67□□□□□ -1.02
LINC00642-202ENST00000442515 TMEM218A2RU14 115 aa8.66□□□□□ -1.02
LINC00642-202ENST00000442515 BCL2P10415 239 aa8.66□□□□□ -1.02
LINC00642-202ENST00000442515 RBX1P62877 108 aa8.66□□□□□ -1.02
LINC00642-202ENST00000442515 FLI1Q01543 452 aaPredicted RBP8.66□□□□□ -1.02
LINC00642-202ENST00000442515 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
LINC00642-202ENST00000442515 C5orf17Q8NAS9 161 aa8.66□□□□□ -1.02
LINC00642-202ENST00000442515 SFRP2Q96HF1 295 aa8.66□□□□□ -1.02
LINC00642-202ENST00000442515 EIF5A2Q9GZV4 153 aaKnown RBP8.66□□□□□ -1.02
LINC00642-202ENST00000442515 IGKV2-24A0A0C4DH68 120 aa8.65□□□□□ -1.02
LINC00642-202ENST00000442515 A0A1B0GV50 99 aa8.65□□□□□ -1.02
LINC00642-202ENST00000442515 K7EQM0 130 aa8.65□□□□□ -1.02
LINC00642-202ENST00000442515 ARMS2P0C7Q2 107 aa8.65□□□□□ -1.02
LINC00642-202ENST00000442515 SRSF3P84103 164 aaKnown RBP8.65□□□□□ -1.02
LINC00642-202ENST00000442515 COX6A2Q02221 97 aa8.65□□□□□ -1.02
LINC00642-202ENST00000442515 LCE2AQ5TA79 106 aaPredicted RBP8.65□□□□□ -1.02
LINC00642-202ENST00000442515 GNG13Q9P2W3 67 aa8.65□□□□□ -1.02
LINC00642-202ENST00000442515 VAX2Q9UIW0 290 aa8.65□□□□□ -1.02
LINC00642-202ENST00000442515 ARL2-SNX15V9GYD0 113 aa8.65□□□□□ -1.02
LINC00642-202ENST00000442515 HMGB3O15347 200 aaKnown RBP8.64□□□□□ -1.03
LINC00642-202ENST00000442515 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
LINC00642-202ENST00000442515 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC00642-202ENST00000442515 C10orf91Q5T1B1 145 aa8.64□□□□□ -1.03
LINC00642-202ENST00000442515 STPG4Q8N801 248 aa8.64□□□□□ -1.03
LINC00642-202ENST00000442515 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
LINC00642-202ENST00000442515 SEC11CQ9BY50 192 aa8.64□□□□□ -1.03
LINC00642-202ENST00000442515 TMEM167BQ9NRX6 74 aa8.64□□□□□ -1.03
LINC00642-202ENST00000442515 CARHSP1Q9Y2V2 147 aaKnown RBP8.64□□□□□ -1.03
LINC00642-202ENST00000442515 B4DEV8 164 aa8.63□□□□□ -1.03
LINC00642-202ENST00000442515 M0R381 172 aa8.63□□□□□ -1.03
LINC00642-202ENST00000442515 GCHFRP30047 84 aa8.63□□□□□ -1.03
LINC00642-202ENST00000442515 MEF2BQ02080 365 aaPredicted RBP8.63□□□□□ -1.03
LINC00642-202ENST00000442515 REG3AQ06141 175 aa8.63□□□□□ -1.03
LINC00642-202ENST00000442515 GAGE6Q13070 117 aa8.63□□□□□ -1.03
LINC00642-202ENST00000442515 SAPCD1Q5SSQ6 148 aa8.63□□□□□ -1.03
LINC00642-202ENST00000442515 PRSS3P2Q8NHM4 247 aa8.63□□□□□ -1.03
LINC00642-202ENST00000442515 SUN5Q8TC36 379 aa8.63□□□□□ -1.03
LINC00642-202ENST00000442515 H7C1H1 209 aa8.62□□□□□ -1.03
LINC00642-202ENST00000442515 NTM-AS1Q6ZSK4 140 aa8.62□□□□□ -1.03
LINC00642-202ENST00000442515 PHLDA3Q9Y5J5 127 aa8.62□□□□□ -1.03
LINC00642-202ENST00000442515 GRIFINA4D1Z8 144 aa8.61□□□□□ -1.03
LINC00642-202ENST00000442515 FABP5P3A8MUU1 101 aa8.61□□□□□ -1.03
LINC00642-202ENST00000442515 C9JQL5 133 aa8.61□□□□□ -1.03
LINC00642-202ENST00000442515 F8W036 122 aa8.61□□□□□ -1.03
LINC00642-202ENST00000442515 TMEM250H0YL14 139 aa8.61□□□□□ -1.03
LINC00642-202ENST00000442515 M0R036 132 aa8.61□□□□□ -1.03
LINC00642-202ENST00000442515 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
LINC00642-202ENST00000442515 ADCYAP1P18509 176 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms