RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 IGKV1D-37A0A075B6S9 117 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 FAM236DA0A1B0GTK5 79 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 CGB3P0DN86 165 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 CGB7P0DN87 165 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 FAM236CP0DP71 79 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 RPL18AQ02543 176 aaKnown RBP10.55□□□□□ -0.72
LINC01271-201ENST00000441214 NEXN-AS1Q8NBZ9 246 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 CYSTM1Q9H1C7 97 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 TMEM14CQ9P0S9 112 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 AKAP9Q99996 3911 aa10.55□□□□□ -0.72
LINC01271-201ENST00000441214 FLNAP21333 2647 aaKnown RBP10.55□□□□□ -0.72
LINC01271-201ENST00000441214 CSPG4Q6UVK1 2322 aa10.54□□□□□ -0.72
LINC01271-201ENST00000441214 SIRPDQ9H106 197 aa10.54□□□□□ -0.72
LINC01271-201ENST00000441214 ERHP84090 104 aaKnown RBP10.54□□□□□ -0.72
LINC01271-201ENST00000441214 RPL39P5Q59GN2 51 aa10.54□□□□□ -0.72
LINC01271-201ENST00000441214 PAPPA-AS1Q5QFB9 102 aa10.54□□□□□ -0.72
LINC01271-201ENST00000441214 C10orf105Q8TEF2 133 aa10.54□□□□□ -0.72
LINC01271-201ENST00000441214 CNFNQ9BYD5 112 aa10.54□□□□□ -0.72
LINC01271-201ENST00000441214 TP53TG1Q9Y2A0 90 aa10.54□□□□□ -0.72
LINC01271-201ENST00000441214 CREBBPQ92793 2442 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 ACANP16112 2415 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 NDUFC2O95298 119 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 COX7A1P24310 79 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 LMO4P61968 165 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 C1orf229Q6ZS94 237 aaPredicted RBP10.53□□□□□ -0.72
LINC01271-201ENST00000441214 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 TRAV12-2A0A075B6T6 113 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 Q1RN00 199 aa10.53□□□□□ -0.72
LINC01271-201ENST00000441214 COX6CP09669 75 aa10.52□□□□□ -0.73
LINC01271-201ENST00000441214 LYPD1Q8N2G4 141 aa10.52□□□□□ -0.73
LINC01271-201ENST00000441214 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.73
LINC01271-201ENST00000441214 NPC2P61916 151 aa10.51□□□□□ -0.73
LINC01271-201ENST00000441214 COX8CQ7Z4L0 72 aa10.51□□□□□ -0.73
LINC01271-201ENST00000441214 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
LINC01271-201ENST00000441214 TPSG1Q9NRR2 321 aa10.51□□□□□ -0.73
LINC01271-201ENST00000441214 DEFB113Q30KQ7 82 aa10.51□□□□□ -0.73
LINC01271-201ENST00000441214 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC01271-201ENST00000441214 SETXQ7Z333 2677 aaKnown RBP10.51□□□□□ -0.73
LINC01271-201ENST00000441214 IGHV1-8P0DP01 117 aa10.5□□□□□ -0.73
LINC01271-201ENST00000441214 SERP1Q9Y6X1 66 aa10.5□□□□□ -0.73
LINC01271-201ENST00000441214 RNF223E7ERA6 249 aa10.5□□□□□ -0.73
LINC01271-201ENST00000441214 PLGLAQ15195 96 aa10.5□□□□□ -0.73
LINC01271-201ENST00000441214 KLHL30-AS1Q8NEE0 82 aa10.5□□□□□ -0.73
LINC01271-201ENST00000441214 ABCA1O95477 2261 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 TRBV7-1A0A0A6YYK4 115 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 TRIAP1O43715 76 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 SH2D1AO60880 128 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 TOMM6Q96B49 74 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 SCGB3A1Q96QR1 104 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 IGHV3OR16-10A0A075B7F0 116 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 SAA2P0DJI9 122 aaPredicted RBP10.49□□□□□ -0.73
LINC01271-201ENST00000441214 ORMDL2Q53FV1 153 aa10.49□□□□□ -0.73
LINC01271-201ENST00000441214 SONP18583 2426 aaKnown RBP10.48□□□□□ -0.73
LINC01271-201ENST00000441214 EIF4EBP3O60516 100 aaPredicted RBP10.48□□□□□ -0.73
LINC01271-201ENST00000441214 Q6ZS46 218 aa10.48□□□□□ -0.73
LINC01271-201ENST00000441214 Q96MF0 132 aa10.48□□□□□ -0.73
LINC01271-201ENST00000441214 LST1O00453 97 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 GAS8-AS1O95177 125 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 NDUFA4L2Q9NRX3 87 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 MXRA5Q9NR99 2828 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 H3BTX0 84 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 H7C2G1 150 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 IL17RELQ6ZVW7 336 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 WFDC11Q8NEX6 87 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 CR1P17927 2039 aa10.47□□□□□ -0.73
LINC01271-201ENST00000441214 IGHV3-72A0A0B4J1Y9 119 aa10.46□□□□□ -0.73
LINC01271-201ENST00000441214 VMO1Q7Z5L0 202 aa10.46□□□□□ -0.73
LINC01271-201ENST00000441214 LY6G5BQ8NDX9 201 aa10.46□□□□□ -0.73
LINC01271-201ENST00000441214 DCANP1Q8TF63 244 aa10.46□□□□□ -0.73
LINC01271-201ENST00000441214 OTOGQ6ZRI0 2925 aa10.46□□□□□ -0.73
LINC01271-201ENST00000441214 SYNJ2BPP57105 145 aa10.46□□□□□ -0.74
LINC01271-201ENST00000441214 LINC00574Q9H8X3 128 aa10.46□□□□□ -0.74
LINC01271-201ENST00000441214 ICOSQ9Y6W8 199 aa10.45□□□□□ -0.74
LINC01271-201ENST00000441214 SMIM26A0A096LP01 95 aa10.45□□□□□ -0.74
LINC01271-201ENST00000441214 ERCC8Q13216 396 aa10.45□□□□□ -0.74
LINC01271-201ENST00000441214 KRTAP1-3Q8IUG1 177 aa10.45□□□□□ -0.74
LINC01271-201ENST00000441214 DAND5Q8N907 189 aa10.45□□□□□ -0.74
LINC01271-201ENST00000441214 NRACQ8N912 160 aa10.45□□□□□ -0.74
LINC01271-201ENST00000441214 C8orf49Q96NF6 230 aa10.45□□□□□ -0.74
LINC01271-201ENST00000441214 TRBV19A0A075B6N1 114 aa10.44□□□□□ -0.74
LINC01271-201ENST00000441214 GATA1P15976 413 aaPredicted RBP10.44□□□□□ -0.74
LINC01271-201ENST00000441214 C16orf95Q9H693 158 aa10.44□□□□□ -0.74
LINC01271-201ENST00000441214 BEX4Q9NWD9 120 aaPredicted RBP10.44□□□□□ -0.74
LINC01271-201ENST00000441214 A0A1W2PRX2 142 aa10.44□□□□□ -0.74
LINC01271-201ENST00000441214 PLXNB1O43157 2135 aa10.43□□□□□ -0.74
LINC01271-201ENST00000441214 VMA21Q3ZAQ7 101 aa10.43□□□□□ -0.74
LINC01271-201ENST00000441214 CUBNO60494 3623 aa10.43□□□□□ -0.74
LINC01271-201ENST00000441214 A0A0U1RRA0 63 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 EGR2P11161 476 aaPredicted RBP10.42□□□□□ -0.74
LINC01271-201ENST00000441214 RHOHQ15669 191 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 RUSC1-AS1Q66K80 236 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 HCP5Q6MZN7 132 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 APRG1Q8IVJ8 170 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 EEF1AKMT3Q96AZ1 226 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 TIMM21Q9BVV7 248 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 MSRB1Q9NZV6 116 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 A0A096LNT2 108 aa10.42□□□□□ -0.74
LINC01271-201ENST00000441214 IGKV1-16P04430 117 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms