RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TRAV8-6A0A0B4J262 113 aa12.26□□□□□ -0.45
CPSF4-205ENST00000440514 DNAH10OSP0CZ25 163 aa12.26□□□□□ -0.45
CPSF4-205ENST00000440514 FRZBQ92765 325 aa12.26□□□□□ -0.45
CPSF4-205ENST00000440514 PGLYRP4Q96LB8 373 aa12.26□□□□□ -0.45
CPSF4-205ENST00000440514 NAT8BQ9UHF3 227 aa12.26□□□□□ -0.45
CPSF4-205ENST00000440514 DNAH17Q9UFH2 4485 aa12.26□□□□□ -0.45
CPSF4-205ENST00000440514 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 A0A1B0GUT8 65 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 HIGD1CA8MV81 97 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 UBE2D3P61077 147 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 UBE2D2P62837 147 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 TMEM97Q5BJF2 176 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 SUMO4Q6EEV6 95 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 DNAJC30Q96LL9 226 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 V9GYV3 84 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 HECTD4Q9Y4D8 3996 aa12.25□□□□□ -0.45
CPSF4-205ENST00000440514 IGHV3-38A0A0C4DH36 116 aa12.24□□□□□ -0.45
CPSF4-205ENST00000440514 A0A1B0GW15 77 aa12.24□□□□□ -0.45
CPSF4-205ENST00000440514 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
CPSF4-205ENST00000440514 RIGQ13278 110 aa12.24□□□□□ -0.45
CPSF4-205ENST00000440514 ANAPC16Q96DE5 110 aa12.24□□□□□ -0.45
CPSF4-205ENST00000440514 S100A8P05109 93 aa12.23□□□□□ -0.45
CPSF4-205ENST00000440514 BIRC6Q9NR09 4857 aa12.23□□□□□ -0.45
CPSF4-205ENST00000440514 A0A1B0GVY2 172 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 M0QY20 66 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 TNP2Q05952 138 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 Q8N3U1 123 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 TNFRSF18Q9Y5U5 241 aa12.22□□□□□ -0.45
CPSF4-205ENST00000440514 TMEM218A2RU14 115 aa12.21□□□□□ -0.45
CPSF4-205ENST00000440514 DAZ4Q86SG3 579 aaKnown RBP12.21□□□□□ -0.45
CPSF4-205ENST00000440514 C10orf126Q8N4M7 172 aa12.21□□□□□ -0.45
CPSF4-205ENST00000440514 DAZ3Q9NR90 486 aaKnown RBP12.21□□□□□ -0.45
CPSF4-205ENST00000440514 SMIM27A0A1W2PRY6 76 aa12.2□□□□□ -0.46
CPSF4-205ENST00000440514 LINC00862A6NCI5 91 aa12.2□□□□□ -0.46
CPSF4-205ENST00000440514 F8W036 122 aa12.2□□□□□ -0.46
CPSF4-205ENST00000440514 PKIAP61925 76 aa12.2□□□□□ -0.46
CPSF4-205ENST00000440514 COMMD7Q86VX2 200 aa12.2□□□□□ -0.46
CPSF4-205ENST00000440514 SEC11CQ9BY50 192 aa12.2□□□□□ -0.46
CPSF4-205ENST00000440514 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
CPSF4-205ENST00000440514 RASL11AQ6T310 242 aa12.19□□□□□ -0.46
CPSF4-205ENST00000440514 NUP35Q8NFH5 326 aa12.19□□□□□ -0.46
CPSF4-205ENST00000440514 TMEM191AQ9H0A3 160 aa12.19□□□□□ -0.46
CPSF4-205ENST00000440514 PPP1R17O96001 155 aa12.18□□□□□ -0.46
CPSF4-205ENST00000440514 KCNIP4Q6PIL6 250 aa12.18□□□□□ -0.46
CPSF4-205ENST00000440514 Q6ZRN7 208 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-205ENST00000440514 NIT2Q9NQR4 276 aa12.18□□□□□ -0.46
CPSF4-205ENST00000440514 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
CPSF4-205ENST00000440514 NFE4Q86UQ8 179 aa12.16□□□□□ -0.46
CPSF4-205ENST00000440514 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
CPSF4-205ENST00000440514 CTDSP1Q9GZU7 261 aa12.16□□□□□ -0.46
CPSF4-205ENST00000440514 URGCP-MRPS24S4R325 110 aa12.16□□□□□ -0.46
CPSF4-205ENST00000440514 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
CPSF4-205ENST00000440514 NIT1Q86X76 327 aa12.15□□□□□ -0.46
CPSF4-205ENST00000440514 IMMP2LQ96T52 175 aa12.15□□□□□ -0.46
CPSF4-205ENST00000440514 IBA57-AS1B1ANH7 110 aa12.14□□□□□ -0.47
CPSF4-205ENST00000440514 NTM-AS1Q6ZSK4 140 aa12.14□□□□□ -0.47
CPSF4-205ENST00000440514 RPL39LQ96EH5 51 aaKnown RBP12.14□□□□□ -0.47
CPSF4-205ENST00000440514 MRAP2Q96G30 205 aa12.14□□□□□ -0.47
CPSF4-205ENST00000440514 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
CPSF4-205ENST00000440514 Q9HAA7 133 aa12.14□□□□□ -0.47
CPSF4-205ENST00000440514 PKD1P98161 4303 aa12.14□□□□□ -0.47
CPSF4-205ENST00000440514 ELOBQ15370 118 aa12.13□□□□□ -0.47
CPSF4-205ENST00000440514 NDUFA5Q16718 116 aa12.13□□□□□ -0.47
CPSF4-205ENST00000440514 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
CPSF4-205ENST00000440514 ADCYAP1P18509 176 aa12.12□□□□□ -0.47
CPSF4-205ENST00000440514 HBBP68871 147 aa12.12□□□□□ -0.47
CPSF4-205ENST00000440514 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
CPSF4-205ENST00000440514 AMN1Q8IY45 258 aa12.11□□□□□ -0.47
CPSF4-205ENST00000440514 RNF185Q96GF1 192 aa12.11□□□□□ -0.47
CPSF4-205ENST00000440514 CHCHD5Q9BSY4 110 aa12.11□□□□□ -0.47
CPSF4-205ENST00000440514 TMEM242Q9NWH2 141 aa12.11□□□□□ -0.47
CPSF4-205ENST00000440514 PKHD1P08F94 4074 aa12.1□□□□□ -0.47
CPSF4-205ENST00000440514 TRBV25-1A0A075B6N4 114 aa12.1□□□□□ -0.47
CPSF4-205ENST00000440514 A0A087WX48 190 aa12.1□□□□□ -0.47
CPSF4-205ENST00000440514 LAGE3Q14657 143 aa12.1□□□□□ -0.47
CPSF4-205ENST00000440514 BTF3L4Q96K17 158 aa12.1□□□□□ -0.47
CPSF4-205ENST00000440514 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
CPSF4-205ENST00000440514 S100PP25815 95 aa12.09□□□□□ -0.47
CPSF4-205ENST00000440514 CAMPP49913 170 aa12.09□□□□□ -0.47
CPSF4-205ENST00000440514 MPV17L2Q567V2 206 aa12.09□□□□□ -0.47
CPSF4-205ENST00000440514 C10orf91Q5T1B1 145 aa12.09□□□□□ -0.47
CPSF4-205ENST00000440514 MRPL54Q6P161 138 aaKnown RBP12.09□□□□□ -0.47
CPSF4-205ENST00000440514 DNAH11Q96DT5 4516 aa12.09□□□□□ -0.47
CPSF4-205ENST00000440514 IGHV1-24A0A0C4DH33 117 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 TMEM262E9PQX1 116 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 NCR2O95944 276 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 PPBPP02775 128 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 RAB4AP20338 218 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 GAGE6Q13070 117 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 COTL1Q14019 142 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 RHEBQ15382 184 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 IQCJQ1A5X6 159 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 KLK12Q9UKR0 248 aa12.08□□□□□ -0.48
CPSF4-205ENST00000440514 CARHSP1Q9Y2V2 147 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms