RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
HSPG2-206ENST00000439717 HIGD1CA8MV81 97 aa8.05□□□□□ -1.12
HSPG2-206ENST00000439717 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.05□□□□□ -1.12
HSPG2-206ENST00000439717 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
HSPG2-206ENST00000439717 A0A1B0GUT8 65 aa8.04□□□□□ -1.12
HSPG2-206ENST00000439717 M0QY20 66 aa8.04□□□□□ -1.12
HSPG2-206ENST00000439717 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
HSPG2-206ENST00000439717 SUMO4Q6EEV6 95 aa8.04□□□□□ -1.12
HSPG2-206ENST00000439717 UQCC3Q6UW78 93 aa8.04□□□□□ -1.12
HSPG2-206ENST00000439717 PRSS29PA6NIE9 313 aa8.03□□□□□ -1.12
HSPG2-206ENST00000439717 PNRC1Q12796 327 aaPredicted RBP8.03□□□□□ -1.12
HSPG2-206ENST00000439717 RASL11AQ6T310 242 aa8.03□□□□□ -1.12
HSPG2-206ENST00000439717 DAZ4Q86SG3 579 aaKnown RBP8.03□□□□□ -1.12
HSPG2-206ENST00000439717 C10orf126Q8N4M7 172 aa8.03□□□□□ -1.12
HSPG2-206ENST00000439717 DAZ3Q9NR90 486 aaKnown RBP8.03□□□□□ -1.12
HSPG2-206ENST00000439717 NAT8BQ9UHF3 227 aa8.03□□□□□ -1.12
HSPG2-206ENST00000439717 TNFRSF18Q9Y5U5 241 aa8.03□□□□□ -1.12
HSPG2-206ENST00000439717 DNAH17Q9UFH2 4485 aa8.03□□□□□ -1.12
HSPG2-206ENST00000439717 SMIM27A0A1W2PRY6 76 aa8.02□□□□□ -1.13
HSPG2-206ENST00000439717 RIGQ13278 110 aa8.02□□□□□ -1.13
HSPG2-206ENST00000439717 TMEM97Q5BJF2 176 aa8.02□□□□□ -1.13
HSPG2-206ENST00000439717 NFE4Q86UQ8 179 aa8.02□□□□□ -1.13
HSPG2-206ENST00000439717 NUP35Q8NFH5 326 aa8.02□□□□□ -1.13
HSPG2-206ENST00000439717 FRZBQ92765 325 aa8.02□□□□□ -1.13
HSPG2-206ENST00000439717 PPP1R2P9O14990 202 aa8.01□□□□□ -1.13
HSPG2-206ENST00000439717 NIT2Q9NQR4 276 aa8.01□□□□□ -1.13
HSPG2-206ENST00000439717 HECTD4Q9Y4D8 3996 aa8.01□□□□□ -1.13
HSPG2-206ENST00000439717 FAT2Q9NYQ8 4349 aa8.01□□□□□ -1.13
HSPG2-206ENST00000439717 TRBV6-8A0A0A6YYG3 113 aa8□□□□□ -1.13
HSPG2-206ENST00000439717 TMEM191AQ9H0A3 160 aa8□□□□□ -1.13
HSPG2-206ENST00000439717 A0A1B0GW15 77 aa7.99□□□□□ -1.13
HSPG2-206ENST00000439717 IBA57-AS1B1ANH7 110 aa7.99□□□□□ -1.13
HSPG2-206ENST00000439717 NIT1Q86X76 327 aa7.99□□□□□ -1.13
HSPG2-206ENST00000439717 GATD1Q8NB37 220 aa7.99□□□□□ -1.13
HSPG2-206ENST00000439717 ANAPC16Q96DE5 110 aa7.99□□□□□ -1.13
HSPG2-206ENST00000439717 CHCHD7Q9BUK0 85 aa7.99□□□□□ -1.13
HSPG2-206ENST00000439717 URGCP-MRPS24S4R325 110 aa7.99□□□□□ -1.13
HSPG2-206ENST00000439717 A0A1B0GVY2 172 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 TMEM218A2RU14 115 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 LINC00862A6NCI5 91 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 IGHV3-30P01768 117 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 IGHV3-33P01772 117 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 MT-ND4LP03901 98 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 IGHV3-30-3P0DP02 117 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 IGHV3-30-5P0DP03 117 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 PKIAP61925 76 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 LAGE3Q14657 143 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 KCNIP4Q6PIL6 250 aa7.98□□□□□ -1.13
HSPG2-206ENST00000439717 Q6ZRN7 208 aaPredicted RBP7.98□□□□□ -1.13
HSPG2-206ENST00000439717 TRAV26-2A0A0B4J265 109 aa7.97□□□□□ -1.13
HSPG2-206ENST00000439717 TNP2Q05952 138 aa7.97□□□□□ -1.13
HSPG2-206ENST00000439717 COMMD7Q86VX2 200 aa7.97□□□□□ -1.13
HSPG2-206ENST00000439717 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
HSPG2-206ENST00000439717 TRBV25-1A0A075B6N4 114 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 A0A087WX48 190 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 IGHV1-24A0A0C4DH33 117 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 F8W036 122 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 S100A8P05109 93 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 RAB4AP20338 218 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 ELOBQ15370 118 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 IQCJQ1A5X6 159 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 NTM-AS1Q6ZSK4 140 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 MRAP2Q96G30 205 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 RNF185Q96GF1 192 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 SEC11CQ9BY50 192 aa7.96□□□□□ -1.14
HSPG2-206ENST00000439717 TRAV8-3A0A0A6YYJ7 113 aa7.95□□□□□ -1.14
HSPG2-206ENST00000439717 TRBV6-5A0A0K0K1A5 114 aa7.95□□□□□ -1.14
HSPG2-206ENST00000439717 TMEM262E9PQX1 116 aa7.95□□□□□ -1.14
HSPG2-206ENST00000439717 ADCYAP1P18509 176 aa7.95□□□□□ -1.14
HSPG2-206ENST00000439717 AMN1Q8IY45 258 aa7.95□□□□□ -1.14
HSPG2-206ENST00000439717 Q8N3U1 123 aa7.95□□□□□ -1.14
HSPG2-206ENST00000439717 RPL39LQ96EH5 51 aaKnown RBP7.95□□□□□ -1.14
HSPG2-206ENST00000439717 CHCHD5Q9BSY4 110 aa7.95□□□□□ -1.14
HSPG2-206ENST00000439717 PKD1P98161 4303 aa7.94□□□□□ -1.14
HSPG2-206ENST00000439717 A0A1B0GXF2 115 aa7.94□□□□□ -1.14
HSPG2-206ENST00000439717 PPP1R17O96001 155 aa7.94□□□□□ -1.14
HSPG2-206ENST00000439717 CAMPP49913 170 aa7.94□□□□□ -1.14
HSPG2-206ENST00000439717 HBBP68871 147 aa7.94□□□□□ -1.14
HSPG2-206ENST00000439717 COTL1Q14019 142 aa7.94□□□□□ -1.14
HSPG2-206ENST00000439717 FAM104BQ5XKR9 115 aa7.94□□□□□ -1.14
HSPG2-206ENST00000439717 ATP5L2Q7Z4Y8 100 aa7.94□□□□□ -1.14
HSPG2-206ENST00000439717 SDHAF1A6NFY7 115 aa7.93□□□□□ -1.14
HSPG2-206ENST00000439717 NCR2O95944 276 aa7.93□□□□□ -1.14
HSPG2-206ENST00000439717 MRPL54Q6P161 138 aaKnown RBP7.93□□□□□ -1.14
HSPG2-206ENST00000439717 IMMP2LQ96T52 175 aa7.93□□□□□ -1.14
HSPG2-206ENST00000439717 TMEM243Q9BU79 118 aa7.93□□□□□ -1.14
HSPG2-206ENST00000439717 TM2D2Q9BX73 214 aa7.93□□□□□ -1.14
HSPG2-206ENST00000439717 ST20Q9HBF5 79 aa7.93□□□□□ -1.14
HSPG2-206ENST00000439717 I3L3M4 83 aa7.92□□□□□ -1.14
HSPG2-206ENST00000439717 EREGO14944 169 aa7.92□□□□□ -1.14
HSPG2-206ENST00000439717 MRPL51Q4U2R6 128 aaKnown RBP7.92□□□□□ -1.14
HSPG2-206ENST00000439717 MPV17L2Q567V2 206 aa7.92□□□□□ -1.14
HSPG2-206ENST00000439717 C10orf91Q5T1B1 145 aa7.92□□□□□ -1.14
HSPG2-206ENST00000439717 CTDSP1Q9GZU7 261 aa7.92□□□□□ -1.14
HSPG2-206ENST00000439717 Q9HAA7 133 aa7.92□□□□□ -1.14
HSPG2-206ENST00000439717 KLK12Q9UKR0 248 aa7.92□□□□□ -1.14
HSPG2-206ENST00000439717 PSCAO43653 123 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 GAS8-AS1O95177 125 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 PMCHP20382 165 aa7.91□□□□□ -1.14
HSPG2-206ENST00000439717 RPS10P46783 165 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms