RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 IGHV3-33P01772 117 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 SNRPD3P62318 126 aaKnown RBP6.8□□□□□ -1.32
COPB1-202ENST00000439561 FAM223AQ8IWN6 122 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 C5orf56Q8N8D9 126 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 NDUFA4O00483 81 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 COX6B1P14854 86 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 BLCAPP62952 87 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 GPHB5Q86YW7 130 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 DAZ1Q9NQZ3 744 aaKnown RBP6.8□□□□□ -1.32
COPB1-202ENST00000439561 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 IGHV3-38A0A0C4DH36 116 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 A8MZ25 164 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 CCDC179H3BU77 68 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 CRLF1O75462 422 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 EDN2P20800 178 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 NDUFV3P56181 108 aaKnown RBP6.8□□□□□ -1.32
COPB1-202ENST00000439561 SIRPDQ9H106 197 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 IGHV3OR16-12A0A075B7B8 117 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 IGIPA6NJ69 53 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 LEPROTO15243 131 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 Q6ZSV7 163 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 TIMM17AQ99595 171 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 P0DMU3 169 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 FAM231AP0DMU4 169 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 FAM231CP0DMU5 169 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 EBI3Q14213 229 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 MEIG1Q5JSS6 88 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 MYO9AB2RTY4 2548 aa6.79□□□□□ -1.32
COPB1-202ENST00000439561 RHODO00212 210 aa6.78□□□□□ -1.32
COPB1-202ENST00000439561 AJUBAQ96IF1 538 aa6.78□□□□□ -1.32
COPB1-202ENST00000439561 ASH1LQ9NR48 2969 aaKnown RBP6.78□□□□□ -1.32
COPB1-202ENST00000439561 I3L3M4 83 aa6.78□□□□□ -1.32
COPB1-202ENST00000439561 TRIAP1O43715 76 aa6.78□□□□□ -1.32
COPB1-202ENST00000439561 PTPN13Q12923 2485 aa6.78□□□□□ -1.32
COPB1-202ENST00000439561 ZNF22P17026 224 aaPredicted RBP6.78□□□□□ -1.32
COPB1-202ENST00000439561 IGHV3-16A0A0C4DH30 117 aa6.77□□□□□ -1.33
COPB1-202ENST00000439561 ELANEP08246 267 aa6.77□□□□□ -1.33
COPB1-202ENST00000439561 IGHV3-30-3P0DP02 117 aa6.77□□□□□ -1.33
COPB1-202ENST00000439561 POLR2KP53803 58 aaKnown RBP6.77□□□□□ -1.33
COPB1-202ENST00000439561 ITLN2Q8WWU7 325 aaPredicted RBP6.77□□□□□ -1.33
COPB1-202ENST00000439561 USP9YO00507 2555 aaPredicted RBP6.77□□□□□ -1.33
COPB1-202ENST00000439561 HIVEP3Q5T1R4 2406 aa6.77□□□□□ -1.33
COPB1-202ENST00000439561 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
COPB1-202ENST00000439561 IGKV3OR2-268A0A0C4DH90 116 aa6.77□□□□□ -1.33
COPB1-202ENST00000439561 A0A0J9YXY3 114 aa6.77□□□□□ -1.33
COPB1-202ENST00000439561 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
COPB1-202ENST00000439561 ICOSQ9Y6W8 199 aa6.77□□□□□ -1.33
COPB1-202ENST00000439561 CIRBPQ14011 172 aaKnown RBP6.77□□□□□ -1.33
COPB1-202ENST00000439561 RELNP78509 3460 aa6.77□□□□□ -1.33
COPB1-202ENST00000439561 CHD8Q9HCK8 2581 aa6.76□□□□□ -1.33
COPB1-202ENST00000439561 IGHV1OR15-1A0A075B7D0 117 aa6.76□□□□□ -1.33
COPB1-202ENST00000439561 IGF2-ASQ6U949 168 aa6.76□□□□□ -1.33
COPB1-202ENST00000439561 SETD2Q9BYW2 2564 aaPredicted RBP6.76□□□□□ -1.33
COPB1-202ENST00000439561 TRBV10-2A0A0K0K1G8 114 aa6.76□□□□□ -1.33
COPB1-202ENST00000439561 TMEM223A0PJW6 202 aa6.76□□□□□ -1.33
COPB1-202ENST00000439561 SYNJ2BPP57105 145 aa6.76□□□□□ -1.33
COPB1-202ENST00000439561 TMEM263Q8WUH6 116 aaKnown RBP6.76□□□□□ -1.33
COPB1-202ENST00000439561 SVEP1Q4LDE5 3571 aa6.76□□□□□ -1.33
COPB1-202ENST00000439561 RS1O15537 224 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 PRM2P04554 102 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 PROK1P58294 105 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 HERV-K104P63124 156 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 C20orf203Q8NBC4 194 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 USMG5Q96IX5 58 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 CHCHD5Q9BSY4 110 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 U3KQE9 123 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 PRRC2AP48634 2157 aaKnown RBP6.75□□□□□ -1.33
COPB1-202ENST00000439561 KLRB1Q12918 225 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 FAM208BQ5VWN6 2430 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 IGHV4-38-2P0DP08 117 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 ADORA2A-AS1P86434 159 aa6.75□□□□□ -1.33
COPB1-202ENST00000439561 IGLV4-3A0A075B6K6 122 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 RNF223E7ERA6 249 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 IGHV1-69P01742 117 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 MED14OSP0DP75 135 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 RHOHQ15669 191 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 MUC4Q99102 2169 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 TRBV27A0A0K0K1C4 114 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 M0QY20 66 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 ACACBO00763 2458 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 TRGV11A0A075B6L2 103 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 IGHV4OR15-8A0A075B7B6 117 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 A0A087WW49 117 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
COPB1-202ENST00000439561 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
COPB1-202ENST00000439561 TLN2Q9Y4G6 2542 aa6.73□□□□□ -1.33
COPB1-202ENST00000439561 K7ENP7 123 aa6.73□□□□□ -1.33
COPB1-202ENST00000439561 LINC01587Q99440 93 aa6.73□□□□□ -1.33
COPB1-202ENST00000439561 YAE1D1Q9NRH1 226 aa6.73□□□□□ -1.33
COPB1-202ENST00000439561 CACNA1AO00555 2505 aa6.73□□□□□ -1.33
COPB1-202ENST00000439561 USP9XQ93008 2570 aaPredicted RBP6.73□□□□□ -1.33
COPB1-202ENST00000439561 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 A0A1W2PPR1 153 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 LINC00315P59091 139 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 ATP5J2P56134 94 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 LMO4P61968 165 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 TMEM101Q96IK0 257 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms