RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 MRPL53Q96EL3 112 aaKnown RBP5.55□□□□□ -1.52
GARNL3-205ENST00000435213 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
GARNL3-205ENST00000435213 RBM3P98179 157 aaKnown RBP5.55□□□□□ -1.52
GARNL3-205ENST00000435213 ATP1A1-AS1Q5TC04 95 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 HCP5Q6MZN7 132 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 FAM223AQ8IWN6 122 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 TIMM21Q9BVV7 248 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 NBEAQ8NFP9 2946 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 INTS1Q8N201 2190 aaKnown RBP5.55□□□□□ -1.52
GARNL3-205ENST00000435213 H3BRN7 92 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 LST1O00453 97 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 TRIAP1O43715 76 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 Q9UF83 564 aa5.55□□□□□ -1.52
GARNL3-205ENST00000435213 PLAC8L1A1L4L8 177 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 KALRNO60229 2985 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 LOXP28300 417 aaPredicted RBP5.54□□□□□ -1.52
GARNL3-205ENST00000435213 CRIP1P50238 77 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 Q6JHZ5 121 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 TRBV7-6A0A0J9YX20 115 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 M0R3E3 92 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 CCL3L1P16619 93 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 COX8CQ7Z4L0 72 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 VSIG2Q96IQ7 327 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 PRR25Q96S07 402 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 CHD6Q8TD26 2715 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 TMEM223A0PJW6 202 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 XCL1P47992 114 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 PLGLAQ15195 96 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 C20orf197Q8N268 126 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 DCANP1Q8TF63 244 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 XCL2Q9UBD3 114 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 MOB4Q9Y3A3 225 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 ICOSQ9Y6W8 199 aa5.54□□□□□ -1.52
GARNL3-205ENST00000435213 FLNBO75369 2602 aaKnown RBP5.53□□□□□ -1.52
GARNL3-205ENST00000435213 PTPN13Q12923 2485 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 SPG11Q96JI7 2443 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 PRSS2P07478 247 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 SAA4P35542 130 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 CIRBPQ14011 172 aaKnown RBP5.53□□□□□ -1.52
GARNL3-205ENST00000435213 FANCD2OSQ96PS1 177 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 TRAV8-3A0A0A6YYJ7 113 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
GARNL3-205ENST00000435213 PDE6HQ13956 83 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 KHDC1LQ5JSQ8 128 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 GFRALQ6UXV0 394 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 KLHL30-AS1Q8NEE0 82 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 SCGB3A1Q96QR1 104 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 RELNP78509 3460 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 LRRK2Q5S007 2527 aa5.53□□□□□ -1.52
GARNL3-205ENST00000435213 I3L2K1 104 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 SH2D1AO60880 128 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 CCKP06307 115 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 SS18Q15532 418 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 PLA2G2CQ5R387 149 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 DYNAPQ8N1N2 210 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 USP24Q9UPU5 2620 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 IGHV3-21A0A0B4J1V1 117 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 CFHR3Q02985 330 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
GARNL3-205ENST00000435213 ZNF462Q96JM2 2506 aa5.51□□□□□ -1.53
GARNL3-205ENST00000435213 FAM223BA6NKX1 122 aa5.51□□□□□ -1.53
GARNL3-205ENST00000435213 SPRY2O43597 315 aa5.51□□□□□ -1.53
GARNL3-205ENST00000435213 GHRHP01286 108 aa5.51□□□□□ -1.53
GARNL3-205ENST00000435213 NDUFB3O43676 98 aa5.51□□□□□ -1.53
GARNL3-205ENST00000435213 IGKV1-17P01599 117 aa5.51□□□□□ -1.53
GARNL3-205ENST00000435213 H7BZZ5 65 aa5.51□□□□□ -1.53
GARNL3-205ENST00000435213 MAP1AP78559 2803 aaPredicted RBP5.5□□□□□ -1.53
GARNL3-205ENST00000435213 GATA1P15976 413 aaPredicted RBP5.5□□□□□ -1.53
GARNL3-205ENST00000435213 DAD1P61803 113 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 Q6ZS46 218 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 SEM1Q6ZVN7 128 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 LY6G5BQ8NDX9 201 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 CNFNQ9BYD5 112 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 ICE1Q9Y2F5 2266 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 IGHV1-58A0A0C4DH39 117 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 MUSTN1Q8IVN3 82 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 RNASE6Q93091 150 aaKnown RBP5.5□□□□□ -1.53
GARNL3-205ENST00000435213 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 ZGRF1Q86YA3 2104 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 NDUFC1O43677 76 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 IGHV1-8P0DP01 117 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 ZNF491Q8N8L2 437 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 RNF185Q96GF1 192 aa5.5□□□□□ -1.53
GARNL3-205ENST00000435213 IGKV3D-7A0A0C4DH55 119 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 APELAP0DMC3 54 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 ARFGEF3Q5TH69 2177 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 IGLV2-18A0A075B6J9 118 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 IGHV3-72A0A0B4J1Y9 119 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 H3BS24 57 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 K7EIM0 57 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 DNAL4O96015 105 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 CD40P25942 277 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 UBE2E1P51965 193 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 OXLD1Q5BKU9 147 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 C11orf44Q8N8P7 122 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 CLEC2BQ92478 149 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 RNF5Q99942 180 aa5.49□□□□□ -1.53
GARNL3-205ENST00000435213 EGR2P11161 476 aaPredicted RBP5.49□□□□□ -1.53
GARNL3-205ENST00000435213 GRNP28799 593 aaKnown RBP5.49□□□□□ -1.53
GARNL3-205ENST00000435213 FDCSPQ8NFU4 85 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms