RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145		I3L3M4	83 aa		11.8	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	UBE2D1	P51668	147 aa		11.8	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	SCGB2A2	Q13296	93 aa		11.8	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	AMELX	Q99217	191 aa		11.8	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	ZAN	Q9Y493	2812 aa		11.8	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.8	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	RBMY1B	A6NDE4	496 aa	Known RBP	11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	RBMY1E	A6NEQ0	496 aa	Known RBP	11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	RBMY1D	P0C7P1	496 aa	Known RBP	11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	TSPEAR-AS2	P59090	65 aa		11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	DEFB131A	P59861	70 aa		11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	DEFB136	Q30KP8	78 aa		11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	DEFB113	Q30KQ7	82 aa		11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	SCGB1D4	Q6XE38	83 aa		11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	C21orf62-AS1	Q17RA5	79 aa		11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	PIK3CD-AS1	Q5SR53	167 aa		11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.79	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	DOPEY2	Q9Y3R5	2298 aa		11.78	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	TMEM238L	A0A1B0GVL6	79 aa		11.78	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145		A6NJY4	79 aa		11.78	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	C4orf3	Q8WVX3	66 aa		11.78	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	PTH2	Q96A98	100 aa		11.78	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	ZNF462	Q96JM2	2506 aa		11.77	□□□□□ -0.52
HLA-DQB2-231	ENST00000435145	UBR5	O95071	2799 aa	Predicted RBP	11.77	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145		F8W1H4	67 aa		11.77	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	TMEM170B	Q5T4T1	132 aa		11.77	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	TMEM61	Q8N0U2	210 aa		11.77	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	OPRPN	Q99935	248 aa	Predicted RBP	11.77	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	POLQ	O75417	2590 aa		11.77	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	ZNF843	Q8N446	348 aa		11.76	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	PEMT	Q9UBM1	199 aa		11.76	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	SLC25A29	Q8N8R3	303 aa		11.76	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	LINC00467	Q9BRT7	94 aa		11.76	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	MXRA5	Q9NR99	2828 aa		11.75	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	IGLV4-3	A0A075B6K6	122 aa		11.75	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	TMEM223	A0PJW6	202 aa		11.75	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145		J3QQQ9	107 aa		11.75	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	KRTAP1-3	Q8IUG1	177 aa		11.75	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	PRO0461	Q9UI25	63 aa		11.75	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	PYGO1	Q9Y3Y4	419 aa		11.75	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	CSMD2	Q7Z408	3487 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145		M0R2P5	195 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	DLX4	Q92988	240 aa	Predicted RBP	11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145		A8MWV9	139 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145		H3BMG7	143 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	LEPROT	O15243	131 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	IGHV3-30	P01768	117 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	IGHV3-30-5	P0DP03	117 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	FAM104A	Q969W3	186 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	MAP6D1	Q9H9H5	199 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	PGPEP1	Q9NXJ5	209 aa		11.74	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	SORL1	Q92673	2214 aa		11.73	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	FAM208B	Q5VWN6	2430 aa		11.73	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	TEX48	A0A1B0GUV7	120 aa		11.73	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	ZNF22	P17026	224 aa	Predicted RBP	11.73	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	WFDC2	Q14508	124 aa		11.73	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	PTPN13	Q12923	2485 aa		11.73	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	LRRK2	Q5S007	2527 aa		11.73	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	CRYBA4	P53673	196 aa		11.72	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	ZNF415	Q09FC8	603 aa		11.72	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	TMEM86B	Q8N661	226 aa		11.72	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145		Q96MF0	132 aa		11.72	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	DUX3	Q96PT4	197 aa		11.72	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	RHOD	O00212	210 aa		11.72	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	PROK1	P58294	105 aa		11.72	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	DEFB114	Q30KQ6	69 aa		11.72	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	TSPAN13	O95857	204 aa		11.71	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	LGALS3	P17931	250 aa	Known RBP	11.71	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	RPL24	P83731	157 aa	Known RBP	11.71	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	NDUFA11	Q86Y39	141 aa		11.71	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	C11orf72	Q8NBR9	251 aa		11.71	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	CLUHP3	Q96NS8	147 aa		11.71	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	VCX2	Q9H322	139 aa		11.71	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	MRPL16	Q9NX20	251 aa	Known RBP	11.71	□□□□□ -0.53
HLA-DQB2-231	ENST00000435145	CREBBP	Q92793	2442 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	IGHV3-73	A0A0B4J1V6	119 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145		A0A0J9YXV3	536 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	PRM2	P04554	102 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	HTN1	P15515	57 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	UBE2D3	P61077	147 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	UBE2D2	P62837	147 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	BEAN1	Q3B7T3	259 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	GAGE13	Q4V321	117 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	CFAP126	Q5VTH2	177 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145		Q6ZSN1	163 aa		11.7	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	DYNLRB2	Q8TF09	96 aa		11.69	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	NAV2	Q8IVL1	2488 aa		11.69	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	MRPS36	P82909	103 aa	Known RBP	11.69	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	TNFRSF18	Q9Y5U5	241 aa		11.69	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	CFC1B	P0CG36	223 aa		11.68	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	CFC1	P0CG37	223 aa		11.68	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	CD28	P10747	220 aa		11.68	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	RAX2	Q96IS3	184 aa		11.68	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	SPX	Q9BT56	116 aa		11.68	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	NACA	E9PAV3	2078 aa		11.68	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145		Q6ZSV7	163 aa		11.67	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	CHCHD7	Q9BUK0	85 aa		11.67	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145		Q9UF83	564 aa		11.67	□□□□□ -0.54
HLA-DQB2-231	ENST00000435145	CENPE	Q02224	2701 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms