RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TMEM126AQ9H061 195 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 FAM74A4Q5TZK3 123 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 LINC01587Q99440 93 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 TRAV5A0A0B4J249 113 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 SOCS3O14543 225 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 ZNHIT1O43257 154 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 MSMPQ1L6U9 139 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 H3BUT2 72 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 MIFP14174 115 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 C9orf66Q5T8R8 295 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 LINC01600Q96MT4 127 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 MRPL35Q9NZE8 188 aaKnown RBP2.85□□□□□ -1.95
SHPRH-205ENST00000433355 BPTFQ12830 3046 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 NDUFA1O15239 70 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 EGR2P11161 476 aaPredicted RBP2.85□□□□□ -1.95
SHPRH-205ENST00000433355 MORN5Q5VZ52 161 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 C16orf95Q9H693 158 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 IGHV3-66A0A0C4DH42 116 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 TRBV10-2A0A0K0K1G8 114 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 SPINK4O60575 86 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 BCE1O60756 84 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 PFN2P35080 140 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 PGPEP1Q9NXJ5 209 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 IGKV2-40A0A087WW87 121 aaPredicted RBP2.85□□□□□ -1.95
SHPRH-205ENST00000433355 TRBV30A0A0K0K1B3 111 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 IGKV2D-40P01614 121 aaPredicted RBP2.85□□□□□ -1.95
SHPRH-205ENST00000433355 ZNF22P17026 224 aaPredicted RBP2.85□□□□□ -1.95
SHPRH-205ENST00000433355 CST9LQ9H4G1 147 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 GAGE2BQ13066 116 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 GAGE2EQ4V326 116 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 FAM120AOSQ5T036 256 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 GAGE2DQ9UEU5 116 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 TENM1Q9UKZ4 2725 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 IGHV3-16A0A0C4DH30 117 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 M0QY20 66 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 CFC1BP0CG36 223 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 CFC1P0CG37 223 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 NDPQ00604 133 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 MIAQ16674 131 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 J3QKU1 62 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 FHL3Q13643 280 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 FAM19A4Q96LR4 140 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 KLK15Q9H2R5 256 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 FAM30AQ9NZY2 134 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 LOC107984156A0A0G2JMH3 177 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 LINC01548A6NM66 108 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 ARL17AQ8IVW1 177 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 DCANP1Q8TF63 244 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 SPATA25Q9BR10 227 aa2.84□□□□□ -1.95
SHPRH-205ENST00000433355 TRBV10-3A0A0K0K1G6 114 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 CHCHD5Q9BSY4 110 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 ZNF688P0C7X2 276 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 KIAA1644Q3SXP7 199 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 NBEAQ8NFP9 2946 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 FSHBP01225 129 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 NRACQ8N912 160 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 SNRPCP09234 159 aaKnown RBP2.84□□□□□ -1.96
SHPRH-205ENST00000433355 CKS1BP61024 79 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 PRIMA1Q86XR5 153 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 KLHL30-AS1Q8NEE0 82 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 UBE2WQ96B02 151 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 TPSG1Q9NRR2 321 aa2.84□□□□□ -1.96
SHPRH-205ENST00000433355 TMSB15BA0A087X1C1 80 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 TTC32Q5I0X7 151 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 Q8TAT8 98 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 EREGO14944 169 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 WIPF1O43516 503 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 DMBT1Q9UGM3 2413 aaPredicted RBP2.83□□□□□ -1.96
SHPRH-205ENST00000433355 NDUFC2O95298 119 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 UBE2D3P61077 147 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 UBE2D2P62837 147 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 AMELXQ99217 191 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 NDUFC1O43677 76 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 TRGV4A0A0C4DH28 118 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 ATOX1O00244 68 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 A0A087WZ39 114 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 PCP4P48539 62 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 PRSS29PA6NIE9 313 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 UBE2D1P51668 147 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 DEFB114Q30KQ6 69 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 HIST2H2BCQ6DN03 193 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 HIST2H2BDQ6DRA6 164 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 TRGV1A0A0A0MS02 117 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 COX7A2LO14548 114 aa2.83□□□□□ -1.96
SHPRH-205ENST00000433355 ZFP36P26651 326 aaKnown RBP2.82□□□□□ -1.96
SHPRH-205ENST00000433355 LINC00173Q6ZV60 143 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 IGLV5-39A0A0G2JS06 123 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 UFSP1Q6NVU6 142 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 PRO0255Q9UI72 69 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 CHD7Q9P2D1 2997 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 TRAV8-3A0A0A6YYJ7 113 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 IGLL5B9A064 214 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 NDUFC2-KCTD14E9PQ53 114 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 LINC00482Q8N8I6 264 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 IGHV4-61A0A0C4DH41 118 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 F8WEM9 126 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 LY6DQ14210 128 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 UBL5Q9BZL1 73 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 hADV29S1A0JD25 119 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 ADARB2-AS1A8MUL3 147 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms