RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ATRAIDQ6UW56 229 aa9.24□□□□□ -0.93
SMARCE1-205ENST00000431889 DERL1Q9BUN8 251 aa9.24□□□□□ -0.93
SMARCE1-205ENST00000431889 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
SMARCE1-205ENST00000431889 MGPP08493 103 aa9.23□□□□□ -0.93
SMARCE1-205ENST00000431889 SEC11BP0C7V7 166 aa9.23□□□□□ -0.93
SMARCE1-205ENST00000431889 Q0VG73 95 aa9.23□□□□□ -0.93
SMARCE1-205ENST00000431889 OR10G8Q8NGN5 311 aa9.23□□□□□ -0.93
SMARCE1-205ENST00000431889 PANO1I0J062 215 aa9.22□□□□□ -0.93
SMARCE1-205ENST00000431889 PRSS1P07477 247 aa9.22□□□□□ -0.93
SMARCE1-205ENST00000431889 HNRNPA3P51991 378 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-205ENST00000431889 CCL20P78556 96 aa9.22□□□□□ -0.93
SMARCE1-205ENST00000431889 TMUB2Q71RG4 321 aa9.22□□□□□ -0.93
SMARCE1-205ENST00000431889 LINC00269Q8N2A0 174 aa9.22□□□□□ -0.93
SMARCE1-205ENST00000431889 KCNRGQ8N5I3 272 aa9.22□□□□□ -0.93
SMARCE1-205ENST00000431889 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
SMARCE1-205ENST00000431889 PFDN1O60925 122 aa9.21□□□□□ -0.93
SMARCE1-205ENST00000431889 RAB5CP51148 216 aa9.21□□□□□ -0.93
SMARCE1-205ENST00000431889 RGS21Q2M5E4 152 aa9.21□□□□□ -0.93
SMARCE1-205ENST00000431889 MBD3L1Q8WWY6 194 aa9.21□□□□□ -0.93
SMARCE1-205ENST00000431889 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.93
SMARCE1-205ENST00000431889 SNAI2O43623 268 aa9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 RBX1P62877 108 aa9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 KIF25-AS1Q9Y6Z4 181 aa9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 H2AFB1P0C5Y9 115 aa9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 SMIM17P0DL12 118 aa9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 RPL35P42766 123 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 TCEAL7Q9BRU2 100 aa9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 SSBP4Q9BWG4 385 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 GNG13Q9P2W3 67 aa9.2□□□□□ -0.94
SMARCE1-205ENST00000431889 RPL37AP61513 92 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-205ENST00000431889 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
SMARCE1-205ENST00000431889 RAB19A4D1S5 217 aa9.18□□□□□ -0.94
SMARCE1-205ENST00000431889 OR5AL1P0C617 328 aa9.18□□□□□ -0.94
SMARCE1-205ENST00000431889 NKX2-5P52952 324 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-205ENST00000431889 C14orf177Q52M58 125 aa9.18□□□□□ -0.94
SMARCE1-205ENST00000431889 KRTAP26-1Q6PEX3 210 aa9.18□□□□□ -0.94
SMARCE1-205ENST00000431889 DAZAP1Q96EP5 407 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-205ENST00000431889 UBR4Q5T4S7 5183 aa9.18□□□□□ -0.94
SMARCE1-205ENST00000431889 KANTRA0A1W2PQU2 76 aa9.17□□□□□ -0.94
SMARCE1-205ENST00000431889 S100A9P06702 114 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-205ENST00000431889 CENPWQ5EE01 88 aa9.17□□□□□ -0.94
SMARCE1-205ENST00000431889 SUMO4Q6EEV6 95 aa9.17□□□□□ -0.94
SMARCE1-205ENST00000431889 AP1S3Q96PC3 154 aa9.17□□□□□ -0.94
SMARCE1-205ENST00000431889 GFRA4Q9GZZ7 299 aa9.17□□□□□ -0.94
SMARCE1-205ENST00000431889 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 BCL2L11O43521 198 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 CXCL1P09341 107 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 MIAQ16674 131 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 UMAD1C9J7I0 102 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 M0QY20 66 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 ZNF345Q14585 488 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 VAX2Q9UIW0 290 aa9.16□□□□□ -0.94
SMARCE1-205ENST00000431889 CHTF8P0CG12 524 aa9.15□□□□□ -0.95
SMARCE1-205ENST00000431889 REG3AQ06141 175 aa9.15□□□□□ -0.95
SMARCE1-205ENST00000431889 FER1L6-AS1Q8NA97 138 aa9.15□□□□□ -0.95
SMARCE1-205ENST00000431889 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.95
SMARCE1-205ENST00000431889 PRR34Q9NV39 138 aa9.15□□□□□ -0.95
SMARCE1-205ENST00000431889 IGHV1-24A0A0C4DH33 117 aa9.14□□□□□ -0.95
SMARCE1-205ENST00000431889 IGKV3OR2-268A0A0C4DH90 116 aa9.14□□□□□ -0.95
SMARCE1-205ENST00000431889 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
SMARCE1-205ENST00000431889 C9orf163Q8N9P6 203 aa9.14□□□□□ -0.95
SMARCE1-205ENST00000431889 A0A0D9SG52 128 aa9.13□□□□□ -0.95
SMARCE1-205ENST00000431889 IGLC6P0CF74 106 aa9.13□□□□□ -0.95
SMARCE1-205ENST00000431889 HMSDA8MTL9 139 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 SLPIP03973 132 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 LYZL1Q6UWQ5 148 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 DPH3Q96FX2 82 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 TRAV26-2A0A0B4J265 109 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 C19orf71A6NCJ1 209 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 OXTP01178 125 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 MANBALQ9NQG1 85 aa9.12□□□□□ -0.95
SMARCE1-205ENST00000431889 GNG4P50150 75 aa9.11□□□□□ -0.95
SMARCE1-205ENST00000431889 PKIAP61925 76 aa9.11□□□□□ -0.95
SMARCE1-205ENST00000431889 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
SMARCE1-205ENST00000431889 SERTAD4-AS1Q5TG53 156 aa9.11□□□□□ -0.95
SMARCE1-205ENST00000431889 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
SMARCE1-205ENST00000431889 C11orf52Q96A22 123 aa9.11□□□□□ -0.95
SMARCE1-205ENST00000431889 TMEM243Q9BU79 118 aa9.11□□□□□ -0.95
SMARCE1-205ENST00000431889 TRBV20OR9-2A0A075B6H5 130 aa9.1□□□□□ -0.95
SMARCE1-205ENST00000431889 NTF3P20783 257 aa9.1□□□□□ -0.95
SMARCE1-205ENST00000431889 RASL11AQ6T310 242 aa9.1□□□□□ -0.95
SMARCE1-205ENST00000431889 MED9Q9NWA0 146 aa9.1□□□□□ -0.95
SMARCE1-205ENST00000431889 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
SMARCE1-205ENST00000431889 P01737 135 aa9.09□□□□□ -0.95
SMARCE1-205ENST00000431889 UBE2L6O14933 153 aa9.08□□□□□ -0.96
SMARCE1-205ENST00000431889 IFNA1P01562 189 aa9.08□□□□□ -0.96
SMARCE1-205ENST00000431889 FOXA3P55318 350 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-205ENST00000431889 CACNG7P62955 275 aa9.08□□□□□ -0.96
SMARCE1-205ENST00000431889 HIGD2BQ4VC39 106 aa9.08□□□□□ -0.96
SMARCE1-205ENST00000431889 RNASE7Q9H1E1 156 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-205ENST00000431889 H7C1H1 209 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 AMTP48728 403 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 SULT1A2P50226 295 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 RPS20P60866 119 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms