RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 TRBV6-5A0A0K0K1A5 114 aa11.19□□□□□ -0.62
LINC00839-202ENST00000429940 A0A1B0GV72 72 aa11.19□□□□□ -0.62
LINC00839-202ENST00000429940 IGLV1-40P01703 118 aa11.19□□□□□ -0.62
LINC00839-202ENST00000429940 CFC1BP0CG36 223 aa11.19□□□□□ -0.62
LINC00839-202ENST00000429940 CFC1P0CG37 223 aa11.19□□□□□ -0.62
LINC00839-202ENST00000429940 DCANP1Q8TF63 244 aa11.19□□□□□ -0.62
LINC00839-202ENST00000429940 J3QQQ9 107 aa11.18□□□□□ -0.62
LINC00839-202ENST00000429940 ABCA2Q9BZC7 2435 aa11.18□□□□□ -0.62
LINC00839-202ENST00000429940 IGHV4-61A0A0C4DH41 118 aa11.18□□□□□ -0.62
LINC00839-202ENST00000429940 TCL1BO95988 128 aa11.18□□□□□ -0.62
LINC00839-202ENST00000429940 LGALS3P17931 250 aaKnown RBP11.18□□□□□ -0.62
LINC00839-202ENST00000429940 ZNF56Q15929 161 aa11.18□□□□□ -0.62
LINC00839-202ENST00000429940 PTH2Q96A98 100 aa11.18□□□□□ -0.62
LINC00839-202ENST00000429940 CCDC168Q8NDH2 2452 aa11.17□□□□□ -0.62
LINC00839-202ENST00000429940 ATP5J2P56134 94 aa11.17□□□□□ -0.62
LINC00839-202ENST00000429940 C10orf126Q8N4M7 172 aa11.17□□□□□ -0.62
LINC00839-202ENST00000429940 AMELXQ99217 191 aa11.17□□□□□ -0.62
LINC00839-202ENST00000429940 UNC79Q9P2D8 2635 aa11.17□□□□□ -0.62
LINC00839-202ENST00000429940 TRBV20-1A0A075B6N2 111 aa11.16□□□□□ -0.62
LINC00839-202ENST00000429940 IGHV3-16A0A0C4DH30 117 aa11.16□□□□□ -0.62
LINC00839-202ENST00000429940 K7EMT4 169 aa11.16□□□□□ -0.62
LINC00839-202ENST00000429940 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
LINC00839-202ENST00000429940 PIMREGQ9BSJ6 248 aa11.16□□□□□ -0.62
LINC00839-202ENST00000429940 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
LINC00839-202ENST00000429940 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
LINC00839-202ENST00000429940 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
LINC00839-202ENST00000429940 PRO1854Q9UHT4 67 aa11.16□□□□□ -0.62
LINC00839-202ENST00000429940 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 M0QY20 66 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 TGFAP01135 160 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 IGKV3-20P01619 116 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 TEN1Q86WV5 123 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 PPDPFLQ8WWR9 84 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 PDZD2O15018 2839 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 ZNF688P0C7X2 276 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 SCGB1C2P0DMR2 95 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 NSUN5P1Q3KNT7 163 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 TCTEX1D4Q5JR98 221 aa11.15□□□□□ -0.62
LINC00839-202ENST00000429940 RHOHQ15669 191 aa11.14□□□□□ -0.63
LINC00839-202ENST00000429940 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
LINC00839-202ENST00000429940 CKS1BP61024 79 aa11.14□□□□□ -0.63
LINC00839-202ENST00000429940 CFHR3Q02985 330 aa11.14□□□□□ -0.63
LINC00839-202ENST00000429940 FHL3Q13643 280 aa11.14□□□□□ -0.63
LINC00839-202ENST00000429940 TRPT1Q86TN4 253 aaKnown RBP11.14□□□□□ -0.63
LINC00839-202ENST00000429940 Q8N1Y9 231 aa11.14□□□□□ -0.63
LINC00839-202ENST00000429940 TEX15Q9BXT5 2789 aa11.13□□□□□ -0.63
LINC00839-202ENST00000429940 TMEM223A0PJW6 202 aa11.13□□□□□ -0.63
LINC00839-202ENST00000429940 A8MWV9 139 aa11.13□□□□□ -0.63
LINC00839-202ENST00000429940 LEPROTO15243 131 aa11.13□□□□□ -0.63
LINC00839-202ENST00000429940 ODF3Q96PU9 254 aa11.13□□□□□ -0.63
LINC00839-202ENST00000429940 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 IGHV4-30-2A0A087WSY4 118 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 A0A0J9YX75 114 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 A4D1N5 150 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 P0DMU3 169 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 FAM231AP0DMU4 169 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 FAM231CP0DMU5 169 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 TMEM95Q3KNT9 176 aa11.12□□□□□ -0.63
LINC00839-202ENST00000429940 IGHV3-64A0A075B6Q5 118 aa11.11□□□□□ -0.63
LINC00839-202ENST00000429940 CRYBA4P53673 196 aa11.11□□□□□ -0.63
LINC00839-202ENST00000429940 C10orf105Q8TEF2 133 aa11.11□□□□□ -0.63
LINC00839-202ENST00000429940 RAX2Q96IS3 184 aa11.11□□□□□ -0.63
LINC00839-202ENST00000429940 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
LINC00839-202ENST00000429940 SNRPD3P62318 126 aaKnown RBP11.11□□□□□ -0.63
LINC00839-202ENST00000429940 C20orf203Q8NBC4 194 aa11.11□□□□□ -0.63
LINC00839-202ENST00000429940 PRRC2AP48634 2157 aaKnown RBP11.11□□□□□ -0.63
LINC00839-202ENST00000429940 TRAV2A0A0B4J234 112 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 RHODO00212 210 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 MT-ATP8P03928 68 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 ZNF22P17026 224 aaPredicted RBP11.1□□□□□ -0.63
LINC00839-202ENST00000429940 SPINK13Q1W4C9 94 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 Q6ZUT4 128 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 ANKRD29Q8N6D5 301 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 VCX2Q9H322 139 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 NOTCH2Q04721 2471 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 I3L3M4 83 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 XGP55808 180 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 MAPK1IP1LQ8NDC0 245 aa11.1□□□□□ -0.63
LINC00839-202ENST00000429940 A0A0J9YXV3 536 aa11.09□□□□□ -0.63
LINC00839-202ENST00000429940 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
LINC00839-202ENST00000429940 IGHV3-33P01772 117 aa11.09□□□□□ -0.63
LINC00839-202ENST00000429940 PSMB8P28062 276 aa11.09□□□□□ -0.63
LINC00839-202ENST00000429940 MUSTN1Q8IVN3 82 aa11.09□□□□□ -0.63
LINC00839-202ENST00000429940 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
LINC00839-202ENST00000429940 ITPR3Q14573 2671 aa11.08□□□□□ -0.64
LINC00839-202ENST00000429940 IGLV4-3A0A075B6K6 122 aa11.08□□□□□ -0.64
LINC00839-202ENST00000429940 H7C2G1 150 aa11.08□□□□□ -0.64
LINC00839-202ENST00000429940 MSMBP08118 114 aa11.08□□□□□ -0.64
LINC00839-202ENST00000429940 ERG28Q9UKR5 140 aa11.08□□□□□ -0.64
LINC00839-202ENST00000429940 AKAP9Q99996 3911 aa11.07□□□□□ -0.64
LINC00839-202ENST00000429940 K7EQG2 157 aa11.07□□□□□ -0.64
LINC00839-202ENST00000429940 A0A0B4J2C4 111 aa11.07□□□□□ -0.64
LINC00839-202ENST00000429940 SLC25A20O43772 301 aa11.07□□□□□ -0.64
LINC00839-202ENST00000429940 C10orf99Q6UWK7 81 aa11.07□□□□□ -0.64
LINC00839-202ENST00000429940 TLN2Q9Y4G6 2542 aa11.07□□□□□ -0.64
LINC00839-202ENST00000429940 C9JAW5 83 aa11.06□□□□□ -0.64
LINC00839-202ENST00000429940 GEMIN7Q9H840 131 aaKnown RBP11.06□□□□□ -0.64
LINC00839-202ENST00000429940 ZNF580Q9UK33 172 aa11.06□□□□□ -0.64
LINC00839-202ENST00000429940 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms