RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 C6orf223Q8N319 242 aa17.14■□□□□ 0.33
HERPUD2-205ENST00000427455 A0A087WWC5 75 aa17.13■□□□□ 0.33
HERPUD2-205ENST00000427455 IGHV3-38A0A0C4DH36 116 aa17.12■□□□□ 0.33
HERPUD2-205ENST00000427455 A0A1B0GUT8 65 aa17.12■□□□□ 0.33
HERPUD2-205ENST00000427455 K7EP13 123 aa17.12■□□□□ 0.33
HERPUD2-205ENST00000427455 M0QY20 66 aa17.12■□□□□ 0.33
HERPUD2-205ENST00000427455 BTF3P20290 206 aaKnown RBP17.12■□□□□ 0.33
HERPUD2-205ENST00000427455 UQCC3Q6UW78 93 aa17.12■□□□□ 0.33
HERPUD2-205ENST00000427455 TRAV9-2A0A087WT02 112 aa17.11■□□□□ 0.33
HERPUD2-205ENST00000427455 PNRC1Q12796 327 aaPredicted RBP17.1■□□□□ 0.33
HERPUD2-205ENST00000427455 NAT8BQ9UHF3 227 aa17.1■□□□□ 0.33
HERPUD2-205ENST00000427455 HECTD4Q9Y4D8 3996 aa17.09■□□□□ 0.33
HERPUD2-205ENST00000427455 LINC01556Q5JQF7 62 aa17.09■□□□□ 0.33
HERPUD2-205ENST00000427455 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.09■□□□□ 0.33
HERPUD2-205ENST00000427455 NUP35Q8NFH5 326 aa17.09■□□□□ 0.33
HERPUD2-205ENST00000427455 DNAJC30Q96LL9 226 aa17.09■□□□□ 0.33
HERPUD2-205ENST00000427455 SMIM27A0A1W2PRY6 76 aa17.08■□□□□ 0.32
HERPUD2-205ENST00000427455 RASL11AQ6T310 242 aa17.08■□□□□ 0.32
HERPUD2-205ENST00000427455 PRSS29PA6NIE9 313 aa17.07■□□□□ 0.32
HERPUD2-205ENST00000427455 C10orf126Q8N4M7 172 aa17.07■□□□□ 0.32
HERPUD2-205ENST00000427455 TNFRSF18Q9Y5U5 241 aa17.07■□□□□ 0.32
HERPUD2-205ENST00000427455 RIGQ13278 110 aa17.06■□□□□ 0.32
HERPUD2-205ENST00000427455 DAZ4Q86SG3 579 aaKnown RBP17.06■□□□□ 0.32
HERPUD2-205ENST00000427455 DAZ3Q9NR90 486 aaKnown RBP17.06■□□□□ 0.32
HERPUD2-205ENST00000427455 PPP1R2P9O14990 202 aa17.04■□□□□ 0.32
HERPUD2-205ENST00000427455 COMMD7Q86VX2 200 aa17.04■□□□□ 0.32
HERPUD2-205ENST00000427455 FRZBQ92765 325 aa17.04■□□□□ 0.32
HERPUD2-205ENST00000427455 TMEM191AQ9H0A3 160 aa17.04■□□□□ 0.32
HERPUD2-205ENST00000427455 NIT2Q9NQR4 276 aa17.04■□□□□ 0.32
HERPUD2-205ENST00000427455 GATD1Q8NB37 220 aa17.03■□□□□ 0.32
HERPUD2-205ENST00000427455 TRBV6-8A0A0A6YYG3 113 aa17.02■□□□□ 0.32
HERPUD2-205ENST00000427455 TRAV26-2A0A0B4J265 109 aa17.02■□□□□ 0.32
HERPUD2-205ENST00000427455 TMEM218A2RU14 115 aa17.02■□□□□ 0.32
HERPUD2-205ENST00000427455 TMEM97Q5BJF2 176 aa17.02■□□□□ 0.32
HERPUD2-205ENST00000427455 IGHV3-30P01768 117 aa17.01■□□□□ 0.31
HERPUD2-205ENST00000427455 IGHV3-33P01772 117 aa17.01■□□□□ 0.31
HERPUD2-205ENST00000427455 IGHV3-30-3P0DP02 117 aa17.01■□□□□ 0.31
HERPUD2-205ENST00000427455 IGHV3-30-5P0DP03 117 aa17.01■□□□□ 0.31
HERPUD2-205ENST00000427455 LINC00862A6NCI5 91 aa17■□□□□ 0.31
HERPUD2-205ENST00000427455 ADCYAP1P18509 176 aa17■□□□□ 0.31
HERPUD2-205ENST00000427455 NFE4Q86UQ8 179 aa17■□□□□ 0.31
HERPUD2-205ENST00000427455 F8W036 122 aa16.99■□□□□ 0.31
HERPUD2-205ENST00000427455 MT-ND4LP03901 98 aa16.99■□□□□ 0.31
HERPUD2-205ENST00000427455 NIT1Q86X76 327 aa16.99■□□□□ 0.31
HERPUD2-205ENST00000427455 ANAPC16Q96DE5 110 aa16.99■□□□□ 0.31
HERPUD2-205ENST00000427455 A0A1B0GW15 77 aa16.98■□□□□ 0.31
HERPUD2-205ENST00000427455 Q8N3U1 123 aa16.98■□□□□ 0.31
HERPUD2-205ENST00000427455 URGCP-MRPS24S4R325 110 aa16.98■□□□□ 0.31
HERPUD2-205ENST00000427455 PKD1P98161 4303 aa16.97■□□□□ 0.31
HERPUD2-205ENST00000427455 IBA57-AS1B1ANH7 110 aa16.97■□□□□ 0.31
HERPUD2-205ENST00000427455 TNP2Q05952 138 aa16.97■□□□□ 0.31
HERPUD2-205ENST00000427455 KCNIP4Q6PIL6 250 aa16.97■□□□□ 0.31
HERPUD2-205ENST00000427455 Q6ZRN7 208 aaPredicted RBP16.97■□□□□ 0.31
HERPUD2-205ENST00000427455 A0A1B0GVY2 172 aa16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 LAGE3Q14657 143 aa16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 NTM-AS1Q6ZSK4 140 aa16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 AMN1Q8IY45 258 aa16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 RPL39LQ96EH5 51 aaKnown RBP16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 RNF185Q96GF1 192 aa16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 CHCHD7Q9BUK0 85 aa16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 SEC11CQ9BY50 192 aa16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 BIRC6Q9NR09 4857 aa16.96■□□□□ 0.31
HERPUD2-205ENST00000427455 TRBV25-1A0A075B6N4 114 aa16.95■□□□□ 0.3
HERPUD2-205ENST00000427455 RAB4AP20338 218 aa16.95■□□□□ 0.3
HERPUD2-205ENST00000427455 MRAP2Q96G30 205 aa16.95■□□□□ 0.3
HERPUD2-205ENST00000427455 A0A087WX48 190 aa16.94■□□□□ 0.3
HERPUD2-205ENST00000427455 S100A8P05109 93 aa16.94■□□□□ 0.3
HERPUD2-205ENST00000427455 CAMPP49913 170 aa16.94■□□□□ 0.3
HERPUD2-205ENST00000427455 HBBP68871 147 aa16.94■□□□□ 0.3
HERPUD2-205ENST00000427455 MRPL54Q6P161 138 aaKnown RBP16.94■□□□□ 0.3
HERPUD2-205ENST00000427455 CHCHD5Q9BSY4 110 aa16.94■□□□□ 0.3
HERPUD2-205ENST00000427455 IGHV1-24A0A0C4DH33 117 aa16.93■□□□□ 0.3
HERPUD2-205ENST00000427455 PKIAP61925 76 aa16.93■□□□□ 0.3
HERPUD2-205ENST00000427455 IQCJQ1A5X6 159 aa16.93■□□□□ 0.3
HERPUD2-205ENST00000427455 A0A1B0GXF2 115 aa16.92■□□□□ 0.3
HERPUD2-205ENST00000427455 ATP5L2Q7Z4Y8 100 aa16.92■□□□□ 0.3
HERPUD2-205ENST00000427455 DNAH11Q96DT5 4516 aa16.91■□□□□ 0.3
HERPUD2-205ENST00000427455 TRBV6-5A0A0K0K1A5 114 aa16.91■□□□□ 0.3
HERPUD2-205ENST00000427455 TMEM262E9PQX1 116 aa16.91■□□□□ 0.3
HERPUD2-205ENST00000427455 COTL1Q14019 142 aa16.91■□□□□ 0.3
HERPUD2-205ENST00000427455 FAM104BQ5XKR9 115 aa16.91■□□□□ 0.3
HERPUD2-205ENST00000427455 SDHAF1A6NFY7 115 aa16.9■□□□□ 0.3
HERPUD2-205ENST00000427455 Q9HAA7 133 aa16.9■□□□□ 0.3
HERPUD2-205ENST00000427455 PKHD1P08F94 4074 aa16.9■□□□□ 0.3
HERPUD2-205ENST00000427455 GAS8-AS1O95177 125 aa16.89■□□□□ 0.29
HERPUD2-205ENST00000427455 ELOBQ15370 118 aa16.89■□□□□ 0.29
HERPUD2-205ENST00000427455 MPV17L2Q567V2 206 aa16.88■□□□□ 0.29
HERPUD2-205ENST00000427455 TMEM243Q9BU79 118 aa16.88■□□□□ 0.29
HERPUD2-205ENST00000427455 TRAV8-3A0A0A6YYJ7 113 aa16.87■□□□□ 0.29
HERPUD2-205ENST00000427455 NCR2O95944 276 aa16.87■□□□□ 0.29
HERPUD2-205ENST00000427455 RPS10P46783 165 aaKnown RBP16.87■□□□□ 0.29
HERPUD2-205ENST00000427455 MRPL51Q4U2R6 128 aaKnown RBP16.87■□□□□ 0.29
HERPUD2-205ENST00000427455 C10orf91Q5T1B1 145 aa16.87■□□□□ 0.29
HERPUD2-205ENST00000427455 ST20Q9HBF5 79 aa16.87■□□□□ 0.29
HERPUD2-205ENST00000427455 KLK12Q9UKR0 248 aa16.87■□□□□ 0.29
HERPUD2-205ENST00000427455 SMKR1H3BMG3 65 aa16.86■□□□□ 0.29
HERPUD2-205ENST00000427455 PPP1R17O96001 155 aa16.86■□□□□ 0.29
HERPUD2-205ENST00000427455 AMTP48728 403 aa16.86■□□□□ 0.29
HERPUD2-205ENST00000427455 GAGE6Q13070 117 aa16.86■□□□□ 0.29
HERPUD2-205ENST00000427455 CTDSP1Q9GZU7 261 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms