RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 OR5I1Q13606 314 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 SPINK13Q1W4C9 94 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 FAM162BQ5T6X4 162 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 ATRAIDQ6UW56 229 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 SBSPONQ8IVN8 264 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 STHQ8IWL8 128 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 OR4B1Q8NGF8 309 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 RNASE8Q8TDE3 154 aaKnown RBP3.83□□□□□ -1.8
C9orf3-205ENST00000427193 SRD5A3Q9H8P0 318 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 RPH3ALQ9UNE2 315 aa3.83□□□□□ -1.8
C9orf3-205ENST00000427193 DYNC1H1Q14204 4646 aaKnown RBP3.83□□□□□ -1.8
C9orf3-205ENST00000427193 TRAV12-2A0A075B6T6 113 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 LOC102724200A0A096LPH7 203 aaPredicted RBP3.82□□□□□ -1.8
C9orf3-205ENST00000427193 TRAV21A0A0B4J279 112 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 C7orf77A4D0Y5 90 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 H7BYZ3 331 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 NXPH4O95158 308 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 GPX1P07203 203 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 RHEBQ15382 184 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 C11orf72Q8NBR9 251 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 GTSF1Q8WW33 167 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 PTH2Q96A98 100 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 SFRP2Q96HF1 295 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 TM2D3Q9BRN9 247 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 NDFIP1Q9BT67 221 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 RNASE7Q9H1E1 156 aaKnown RBP3.82□□□□□ -1.8
C9orf3-205ENST00000427193 BIN3Q9NQY0 253 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 TP53TG1Q9Y2A0 90 aa3.82□□□□□ -1.8
C9orf3-205ENST00000427193 IGHV1OR15-1A0A075B7D0 117 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 SMIM27A0A1W2PRY6 76 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 SNAI2O43623 268 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 APOC3P02656 99 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 OR5AL1P0C617 328 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 RNASE3P12724 160 aaKnown RBP3.81□□□□□ -1.8
C9orf3-205ENST00000427193 RNASE4P34096 147 aaKnown RBP3.81□□□□□ -1.8
C9orf3-205ENST00000427193 CAMPP49913 170 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 CEBPGP53567 150 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 NUTF2P61970 127 aaKnown RBP3.81□□□□□ -1.8
C9orf3-205ENST00000427193 RNF212Q495C1 297 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 IBA57Q5T440 356 aaKnown RBP3.81□□□□□ -1.8
C9orf3-205ENST00000427193 TMEM256Q8N2U0 113 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 SVBPQ8N300 66 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 Q8NBF4 154 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 TSKUQ8WUA8 353 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 C9orf85Q96MD7 179 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 IMMP2LQ96T52 175 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 OVOL2Q9BRP0 275 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 TUBA4BQ9H853 241 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 XCL2Q9UBD3 114 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 HSPG2P98160 4391 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 VPS13DQ5THJ4 4388 aa3.81□□□□□ -1.8
C9orf3-205ENST00000427193 TRAV12-3A0A0B4J271 114 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 IGHV3-16A0A0C4DH30 117 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 SMIM9A6NGZ8 99 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 SNAPINO95295 136 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 CA1P00915 261 aaPredicted RBP3.8□□□□□ -1.8
C9orf3-205ENST00000427193 INSP01308 110 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 MT-ND4LP03901 98 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 PRM2P04554 102 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 TYMSP04818 313 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 RPL35AP18077 110 aaKnown RBP3.8□□□□□ -1.8
C9orf3-205ENST00000427193 CTRLP40313 264 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 APOC4P55056 127 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 FXYD7P58549 80 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 RPL19P84098 196 aaKnown RBP3.8□□□□□ -1.8
C9orf3-205ENST00000427193 DAZ2Q13117 558 aaKnown RBP3.8□□□□□ -1.8
C9orf3-205ENST00000427193 ADIRFQ15847 76 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 POM121L12Q8N7R1 296 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 Q8NAQ8 132 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 KCNS1Q96KK3 526 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 C18orf15Q96N68 181 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 RPP21Q9H633 154 aaKnown RBP3.8□□□□□ -1.8
C9orf3-205ENST00000427193 IL36BQ9NZH7 164 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 DNAH6Q9C0G6 4158 aa3.8□□□□□ -1.8
C9orf3-205ENST00000427193 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 TRBV24-1A0A075B6N3 115 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 TRAV9-1A0A075B6T8 112 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 A0A1B0GXF2 115 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 A0A1W2PPQ1 181 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 A8MWL6 223 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 PPP1R2P9O14990 202 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 GNRH2O43555 120 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 P01737 135 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 MGST1P10620 155 aaKnown RBP3.79□□□□□ -1.8
C9orf3-205ENST00000427193 TCL1AP56279 114 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 LINC00315P59091 139 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 PRR27Q6MZM9 219 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 UFSP1Q6NVU6 142 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 ZNF493Q6ZR52 646 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 GATD1Q8NB37 220 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 NUP35Q8NFH5 326 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 OR2D3Q8NGH3 330 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 TMEM263Q8WUH6 116 aaKnown RBP3.79□□□□□ -1.8
C9orf3-205ENST00000427193 NDUFAF3Q9BU61 184 aa3.79□□□□□ -1.8
C9orf3-205ENST00000427193 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
C9orf3-205ENST00000427193 DNAH2Q9P225 4427 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 TMEM189A5PLL7 270 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 HIGD1CA8MV81 97 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 F2Z2F3 143 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 M0R036 132 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms