RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 RPS10P5Q9NQ39 176 aa10.56□□□□□ -0.72
PHF1-203ENST00000427004 URGCP-MRPS24S4R325 110 aa10.56□□□□□ -0.72
PHF1-203ENST00000427004 ATP6V0E2Q8NHE4 81 aa10.55□□□□□ -0.72
PHF1-203ENST00000427004 A0A1B0GXF2 115 aa10.54□□□□□ -0.72
PHF1-203ENST00000427004 FAM231BA6NCW3 169 aa10.54□□□□□ -0.72
PHF1-203ENST00000427004 PPP1R2P9O14990 202 aa10.54□□□□□ -0.72
PHF1-203ENST00000427004 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
PHF1-203ENST00000427004 RIGQ13278 110 aa10.54□□□□□ -0.72
PHF1-203ENST00000427004 KRTAP1-5Q9BYS1 174 aa10.54□□□□□ -0.72
PHF1-203ENST00000427004 BIRC6Q9NR09 4857 aa10.53□□□□□ -0.72
PHF1-203ENST00000427004 CIDEAO60543 219 aa10.53□□□□□ -0.72
PHF1-203ENST00000427004 RAB4AP20338 218 aa10.53□□□□□ -0.72
PHF1-203ENST00000427004 CCL18P55774 89 aa10.53□□□□□ -0.72
PHF1-203ENST00000427004 UBE2D3P61077 147 aa10.53□□□□□ -0.72
PHF1-203ENST00000427004 UBE2D2P62837 147 aa10.53□□□□□ -0.72
PHF1-203ENST00000427004 TMEM191AQ9H0A3 160 aa10.52□□□□□ -0.73
PHF1-203ENST00000427004 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.73
PHF1-203ENST00000427004 MRPL51Q4U2R6 128 aaKnown RBP10.51□□□□□ -0.73
PHF1-203ENST00000427004 RASL11AQ6T310 242 aa10.51□□□□□ -0.73
PHF1-203ENST00000427004 DNAH2Q9P225 4427 aa10.51□□□□□ -0.73
PHF1-203ENST00000427004 TRBV7-3A0A075B6L6 115 aa10.5□□□□□ -0.73
PHF1-203ENST00000427004 HBBP68871 147 aa10.5□□□□□ -0.73
PHF1-203ENST00000427004 RPL36AP83881 106 aaKnown RBP10.5□□□□□ -0.73
PHF1-203ENST00000427004 SMIM15Q7Z3B0 74 aa10.5□□□□□ -0.73
PHF1-203ENST00000427004 RPL36ALQ969Q0 106 aaKnown RBP10.5□□□□□ -0.73
PHF1-203ENST00000427004 Q9H8V8 135 aa10.5□□□□□ -0.73
PHF1-203ENST00000427004 TNFRSF18Q9Y5U5 241 aa10.5□□□□□ -0.73
PHF1-203ENST00000427004 DNAH10Q8IVF4 4471 aa10.49□□□□□ -0.73
PHF1-203ENST00000427004 IGHV3-30P01768 117 aa10.49□□□□□ -0.73
PHF1-203ENST00000427004 IGHV3-33P01772 117 aa10.49□□□□□ -0.73
PHF1-203ENST00000427004 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
PHF1-203ENST00000427004 IGHV3-30-5P0DP03 117 aa10.49□□□□□ -0.73
PHF1-203ENST00000427004 FAM104BQ5XKR9 115 aa10.49□□□□□ -0.73
PHF1-203ENST00000427004 NTM-AS1Q6ZSK4 140 aa10.49□□□□□ -0.73
PHF1-203ENST00000427004 GTSF1LQ9H1H1 148 aa10.49□□□□□ -0.73
PHF1-203ENST00000427004 TGIF2-C20orf24A0A0A6YYL0 155 aa10.48□□□□□ -0.73
PHF1-203ENST00000427004 TRBV10-1A0A0K0K1A3 114 aa10.48□□□□□ -0.73
PHF1-203ENST00000427004 OR10J3Q5JRS4 329 aa10.48□□□□□ -0.73
PHF1-203ENST00000427004 IMMP2LQ96T52 175 aa10.48□□□□□ -0.73
PHF1-203ENST00000427004 CTDSP1Q9GZU7 261 aa10.48□□□□□ -0.73
PHF1-203ENST00000427004 RHEBQ15382 184 aa10.47□□□□□ -0.73
PHF1-203ENST00000427004 CBLN2Q8IUK8 224 aa10.47□□□□□ -0.73
PHF1-203ENST00000427004 DNAJC30Q96LL9 226 aa10.47□□□□□ -0.73
PHF1-203ENST00000427004 NIT2Q9NQR4 276 aa10.47□□□□□ -0.73
PHF1-203ENST00000427004 D6R8Y8 96 aa10.46□□□□□ -0.73
PHF1-203ENST00000427004 SIVA1O15304 175 aa10.46□□□□□ -0.73
PHF1-203ENST00000427004 SNAPINO95295 136 aa10.46□□□□□ -0.73
PHF1-203ENST00000427004 NDUFA5Q16718 116 aa10.46□□□□□ -0.73
PHF1-203ENST00000427004 KIAA1644Q3SXP7 199 aa10.46□□□□□ -0.73
PHF1-203ENST00000427004 SVBPQ8N300 66 aa10.46□□□□□ -0.73
PHF1-203ENST00000427004 NRACQ8N912 160 aa10.46□□□□□ -0.73
PHF1-203ENST00000427004 UPK3BQ9BT76 320 aa10.46□□□□□ -0.73
PHF1-203ENST00000427004 FRAS1Q86XX4 4008 aa10.45□□□□□ -0.74
PHF1-203ENST00000427004 A0A087WWC5 75 aa10.45□□□□□ -0.74
PHF1-203ENST00000427004 H7C1H1 209 aa10.45□□□□□ -0.74
PHF1-203ENST00000427004 SCO1O75880 301 aa10.45□□□□□ -0.74
PHF1-203ENST00000427004 NPYP01303 97 aa10.45□□□□□ -0.74
PHF1-203ENST00000427004 LELP1Q5T871 98 aa10.45□□□□□ -0.74
PHF1-203ENST00000427004 TMEM136Q6ZRR5 245 aa10.45□□□□□ -0.74
PHF1-203ENST00000427004 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
PHF1-203ENST00000427004 NBDYA0A0U1RRE5 68 aa10.44□□□□□ -0.74
PHF1-203ENST00000427004 SDHAF1A6NFY7 115 aa10.44□□□□□ -0.74
PHF1-203ENST00000427004 KCNIP4Q6PIL6 250 aa10.44□□□□□ -0.74
PHF1-203ENST00000427004 Q6ZR54 194 aa10.44□□□□□ -0.74
PHF1-203ENST00000427004 ATP5L2Q7Z4Y8 100 aa10.44□□□□□ -0.74
PHF1-203ENST00000427004 TMEM242Q9NWH2 141 aa10.44□□□□□ -0.74
PHF1-203ENST00000427004 CKS2P33552 79 aa10.43□□□□□ -0.74
PHF1-203ENST00000427004 GAGE6Q13070 117 aa10.43□□□□□ -0.74
PHF1-203ENST00000427004 ELOBQ15370 118 aa10.43□□□□□ -0.74
PHF1-203ENST00000427004 DAZ4Q86SG3 579 aaKnown RBP10.43□□□□□ -0.74
PHF1-203ENST00000427004 DAZ3Q9NR90 486 aaKnown RBP10.43□□□□□ -0.74
PHF1-203ENST00000427004 TRBV6-8A0A0A6YYG3 113 aa10.42□□□□□ -0.74
PHF1-203ENST00000427004 SH2D6Q7Z4S9 175 aa10.42□□□□□ -0.74
PHF1-203ENST00000427004 MRAP2Q96G30 205 aa10.42□□□□□ -0.74
PHF1-203ENST00000427004 A0A1B0GW15 77 aa10.41□□□□□ -0.74
PHF1-203ENST00000427004 S100PP25815 95 aa10.41□□□□□ -0.74
PHF1-203ENST00000427004 TIRAPP58753 221 aa10.41□□□□□ -0.74
PHF1-203ENST00000427004 TMEM70Q9BUB7 260 aa10.41□□□□□ -0.74
PHF1-203ENST00000427004 ST20Q9HBF5 79 aa10.41□□□□□ -0.74
PHF1-203ENST00000427004 DNAH17Q9UFH2 4485 aa10.41□□□□□ -0.74
PHF1-203ENST00000427004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
PHF1-203ENST00000427004 TRAV8-6A0A0B4J262 113 aa10.4□□□□□ -0.74
PHF1-203ENST00000427004 LOC389332A0A1B0GUA5 103 aa10.4□□□□□ -0.74
PHF1-203ENST00000427004 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
PHF1-203ENST00000427004 TNFRSF6BO95407 300 aa10.4□□□□□ -0.74
PHF1-203ENST00000427004 TSHBP01222 138 aa10.4□□□□□ -0.74
PHF1-203ENST00000427004 POLR2KP53803 58 aaKnown RBP10.4□□□□□ -0.74
PHF1-203ENST00000427004 MPV17L2Q567V2 206 aa10.4□□□□□ -0.74
PHF1-203ENST00000427004 Q8N976 141 aa10.4□□□□□ -0.74
PHF1-203ENST00000427004 YPEL4Q96NS1 127 aa10.4□□□□□ -0.74
PHF1-203ENST00000427004 CHCHD5Q9BSY4 110 aa10.4□□□□□ -0.74
PHF1-203ENST00000427004 RTL8CO15255 209 aa10.39□□□□□ -0.75
PHF1-203ENST00000427004 S100A8P05109 93 aa10.39□□□□□ -0.75
PHF1-203ENST00000427004 DNAH10OSP0CZ25 163 aa10.39□□□□□ -0.75
PHF1-203ENST00000427004 PMCHP20382 165 aa10.39□□□□□ -0.75
PHF1-203ENST00000427004 CLPSL2Q6UWE3 100 aa10.39□□□□□ -0.75
PHF1-203ENST00000427004 NIT1Q86X76 327 aa10.39□□□□□ -0.75
PHF1-203ENST00000427004 PRELID3AQ96N28 172 aa10.39□□□□□ -0.75
PHF1-203ENST00000427004 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
PHF1-203ENST00000427004 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms