RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CTDSP1Q9GZU7 261 aa16.78■□□□□ 0.28
VEGFA-209ENST00000425836 TRAV26-2A0A0B4J265 109 aa16.77■□□□□ 0.28
VEGFA-209ENST00000425836 MRPL54Q6P161 138 aaKnown RBP16.77■□□□□ 0.28
VEGFA-209ENST00000425836 RASL11AQ6T310 242 aa16.77■□□□□ 0.28
VEGFA-209ENST00000425836 A0A1B0GW15 77 aa16.77■□□□□ 0.27
VEGFA-209ENST00000425836 CAMPP49913 170 aa16.77■□□□□ 0.27
VEGFA-209ENST00000425836 CLRN3Q8NCR9 226 aa16.77■□□□□ 0.27
VEGFA-209ENST00000425836 RNF185Q96GF1 192 aa16.77■□□□□ 0.27
VEGFA-209ENST00000425836 DNAH6Q9C0G6 4158 aa16.76■□□□□ 0.27
VEGFA-209ENST00000425836 A0A1B0GXF2 115 aa16.76■□□□□ 0.27
VEGFA-209ENST00000425836 AMN1Q8IY45 258 aa16.76■□□□□ 0.27
VEGFA-209ENST00000425836 SLC7A5P1Q8MH63 180 aa16.76■□□□□ 0.27
VEGFA-209ENST00000425836 DNAJC30Q96LL9 226 aa16.76■□□□□ 0.27
VEGFA-209ENST00000425836 C7orf77A4D0Y5 90 aa16.75■□□□□ 0.27
VEGFA-209ENST00000425836 RAB4AP20338 218 aa16.75■□□□□ 0.27
VEGFA-209ENST00000425836 HBBP68871 147 aa16.75■□□□□ 0.27
VEGFA-209ENST00000425836 IMMP2LQ96T52 175 aa16.75■□□□□ 0.27
VEGFA-209ENST00000425836 NIT2Q9NQR4 276 aa16.75■□□□□ 0.27
VEGFA-209ENST00000425836 TNFRSF18Q9Y5U5 241 aa16.75■□□□□ 0.27
VEGFA-209ENST00000425836 M0R2N4 97 aa16.74■□□□□ 0.27
VEGFA-209ENST00000425836 APOC3P02656 99 aa16.74■□□□□ 0.27
VEGFA-209ENST00000425836 LELP1Q5T871 98 aa16.74■□□□□ 0.27
VEGFA-209ENST00000425836 ATP5L2Q7Z4Y8 100 aa16.73■□□□□ 0.27
VEGFA-209ENST00000425836 WFDC10BQ8IUB3 73 aa16.73■□□□□ 0.27
VEGFA-209ENST00000425836 IGHV3-38A0A0C4DH36 116 aa16.72■□□□□ 0.27
VEGFA-209ENST00000425836 SIVA1O15304 175 aa16.72■□□□□ 0.27
VEGFA-209ENST00000425836 RHEBQ15382 184 aa16.72■□□□□ 0.27
VEGFA-209ENST00000425836 FRZBQ92765 325 aa16.72■□□□□ 0.27
VEGFA-209ENST00000425836 S100A8P05109 93 aa16.72■□□□□ 0.27
VEGFA-209ENST00000425836 Q6ZR54 194 aa16.72■□□□□ 0.27
VEGFA-209ENST00000425836 TMEM242Q9NWH2 141 aa16.72■□□□□ 0.27
VEGFA-209ENST00000425836 A0A087WWC5 75 aa16.71■□□□□ 0.27
VEGFA-209ENST00000425836 NBDYA0A0U1RRE5 68 aa16.71■□□□□ 0.27
VEGFA-209ENST00000425836 OR10J3Q5JRS4 329 aa16.71■□□□□ 0.27
VEGFA-209ENST00000425836 FAM104BQ5XKR9 115 aa16.71■□□□□ 0.27
VEGFA-209ENST00000425836 DAZ4Q86SG3 579 aaKnown RBP16.71■□□□□ 0.27
VEGFA-209ENST00000425836 RPL39LQ96EH5 51 aaKnown RBP16.71■□□□□ 0.27
VEGFA-209ENST00000425836 DAZ3Q9NR90 486 aaKnown RBP16.71■□□□□ 0.27
VEGFA-209ENST00000425836 TRAV8-6A0A0B4J262 113 aa16.7■□□□□ 0.26
VEGFA-209ENST00000425836 GAS8-AS1O95177 125 aa16.7■□□□□ 0.26
VEGFA-209ENST00000425836 MRAP2Q96G30 205 aa16.7■□□□□ 0.26
VEGFA-209ENST00000425836 BTF3L4Q96K17 158 aa16.7■□□□□ 0.26
VEGFA-209ENST00000425836 RPS10P5Q9NQ39 176 aa16.7■□□□□ 0.26
VEGFA-209ENST00000425836 SVBPQ8N300 66 aa16.69■□□□□ 0.26
VEGFA-209ENST00000425836 KCNIP4Q6PIL6 250 aa16.68■□□□□ 0.26
VEGFA-209ENST00000425836 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.68■□□□□ 0.26
VEGFA-209ENST00000425836 SNAPINO95295 136 aa16.67■□□□□ 0.26
VEGFA-209ENST00000425836 MRPL51Q4U2R6 128 aaKnown RBP16.67■□□□□ 0.26
VEGFA-209ENST00000425836 SMKR1H3BMG3 65 aa16.66■□□□□ 0.26
VEGFA-209ENST00000425836 DNAH10OSP0CZ25 163 aa16.66■□□□□ 0.26
VEGFA-209ENST00000425836 KRTAP1-5Q9BYS1 174 aa16.66■□□□□ 0.26
VEGFA-209ENST00000425836 TRBV6-8A0A0A6YYG3 113 aa16.65■□□□□ 0.26
VEGFA-209ENST00000425836 RPS10P46783 165 aaKnown RBP16.65■□□□□ 0.26
VEGFA-209ENST00000425836 TRBV6-5A0A0K0K1A5 114 aa16.64■□□□□ 0.25
VEGFA-209ENST00000425836 NCR2O95944 276 aa16.64■□□□□ 0.25
VEGFA-209ENST00000425836 TTC32Q5I0X7 151 aa16.64■□□□□ 0.25
VEGFA-209ENST00000425836 NTM-AS1Q6ZSK4 140 aa16.64■□□□□ 0.25
VEGFA-209ENST00000425836 URGCP-MRPS24S4R325 110 aa16.64■□□□□ 0.25
VEGFA-209ENST00000425836 TRAV9-1A0A075B6T8 112 aa16.64■□□□□ 0.25
VEGFA-209ENST00000425836 S100PP25815 95 aa16.64■□□□□ 0.25
VEGFA-209ENST00000425836 TMEM97Q5BJF2 176 aa16.64■□□□□ 0.25
VEGFA-209ENST00000425836 LINC01556Q5JQF7 62 aa16.63■□□□□ 0.25
VEGFA-209ENST00000425836 NRACQ8N912 160 aa16.62■□□□□ 0.25
VEGFA-209ENST00000425836 DNAH2Q9P225 4427 aa16.62■□□□□ 0.25
VEGFA-209ENST00000425836 SDHAF1A6NFY7 115 aa16.61■□□□□ 0.25
VEGFA-209ENST00000425836 CKS2P33552 79 aa16.61■□□□□ 0.25
VEGFA-209ENST00000425836 DEFB104AQ8WTQ1 72 aa16.61■□□□□ 0.25
VEGFA-209ENST00000425836 ST20Q9HBF5 79 aa16.61■□□□□ 0.25
VEGFA-209ENST00000425836 TRAV9-2A0A087WT02 112 aa16.6■□□□□ 0.25
VEGFA-209ENST00000425836 PPP1R17O96001 155 aa16.6■□□□□ 0.25
VEGFA-209ENST00000425836 Q8N3U1 123 aa16.6■□□□□ 0.25
VEGFA-209ENST00000425836 D6R8Y8 96 aa16.59■□□□□ 0.25
VEGFA-209ENST00000425836 IGHV3-30P01768 117 aa16.59■□□□□ 0.25
VEGFA-209ENST00000425836 IGHV3-33P01772 117 aa16.59■□□□□ 0.25
VEGFA-209ENST00000425836 IGHV3-30-3P0DP02 117 aa16.59■□□□□ 0.25
VEGFA-209ENST00000425836 IGHV3-30-5P0DP03 117 aa16.59■□□□□ 0.25
VEGFA-209ENST00000425836 ATRAIDQ6UW56 229 aa16.59■□□□□ 0.25
VEGFA-209ENST00000425836 NIT1Q86X76 327 aa16.59■□□□□ 0.25
VEGFA-209ENST00000425836 K7EP13 123 aa16.58■□□□□ 0.24
VEGFA-209ENST00000425836 POLR2KP53803 58 aaKnown RBP16.58■□□□□ 0.24
VEGFA-209ENST00000425836 COTL1Q14019 142 aa16.58■□□□□ 0.24
VEGFA-209ENST00000425836 IQCJQ1A5X6 159 aa16.58■□□□□ 0.24
VEGFA-209ENST00000425836 TMEM70Q9BUB7 260 aa16.58■□□□□ 0.24
VEGFA-209ENST00000425836 TRBV25-1A0A075B6N4 114 aa16.57■□□□□ 0.24
VEGFA-209ENST00000425836 IGHV1-24A0A0C4DH33 117 aa16.57■□□□□ 0.24
VEGFA-209ENST00000425836 C1orf134Q5TEV5 83 aa16.57■□□□□ 0.24
VEGFA-209ENST00000425836 TMEM136Q6ZRR5 245 aa16.57■□□□□ 0.24
VEGFA-209ENST00000425836 DNAH10Q8IVF4 4471 aa16.57■□□□□ 0.24
VEGFA-209ENST00000425836 ATP6V1G1O75348 118 aa16.56■□□□□ 0.24
VEGFA-209ENST00000425836 PPBPP02775 128 aa16.56■□□□□ 0.24
VEGFA-209ENST00000425836 CHCHD5Q9BSY4 110 aa16.56■□□□□ 0.24
VEGFA-209ENST00000425836 TRBV24-1A0A075B6N3 115 aa16.55■□□□□ 0.24
VEGFA-209ENST00000425836 I3L3M4 83 aa16.55■□□□□ 0.24
VEGFA-209ENST00000425836 SUMO2P61956 95 aaKnown RBP16.55■□□□□ 0.24
VEGFA-209ENST00000425836 C6orf223Q8N319 242 aa16.55■□□□□ 0.24
VEGFA-209ENST00000425836 C10orf126Q8N4M7 172 aa16.55■□□□□ 0.24
VEGFA-209ENST00000425836 PMCHP20382 165 aa16.55■□□□□ 0.24
VEGFA-209ENST00000425836 ORMDL3Q8N138 153 aa16.55■□□□□ 0.24
VEGFA-209ENST00000425836 TRBV27A0A0K0K1C4 114 aa16.54■□□□□ 0.24
VEGFA-209ENST00000425836 TMEM262E9PQX1 116 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms