RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 C12orf54Q6X4T0 127 aa8.77□□□□□ -1
PTPRN-204ENST00000423636 SPAG8Q99932 426 aaPredicted RBP8.77□□□□□ -1
PTPRN-204ENST00000423636 KIF25-AS1Q9Y6Z4 181 aa8.77□□□□□ -1.01
PTPRN-204ENST00000423636 TSHBP01222 138 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 SCGB2A2Q13296 93 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 CHAC1Q9BUX1 264 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 LENEPQ9Y5L5 61 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 FSHBP01225 129 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 CRYGDP07320 174 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 ZFP2Q6ZN57 461 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 DEFB125Q8N687 156 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 MRAP2Q96G30 205 aa8.76□□□□□ -1.01
PTPRN-204ENST00000423636 IGHV4-4A0A075B6R2 117 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 AMTNQ6UX39 209 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 ORAOV1Q8WV07 137 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 PKD1L1Q8TDX9 2849 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 A0A087WX48 190 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 C11orf86A6NJI1 115 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 A8MZ25 164 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 H3BMM0 161 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 ATP5LO75964 103 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 UBE2V1Q13404 147 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 MAP6D1Q9H9H5 199 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 MAST4O15021 2626 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 NOTCH1P46531 2555 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 SAP30O75446 220 aa8.75□□□□□ -1.01
PTPRN-204ENST00000423636 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
PTPRN-204ENST00000423636 SCGB1D4Q6XE38 83 aa8.74□□□□□ -1.01
PTPRN-204ENST00000423636 KIR2DL4Q99706 377 aa8.74□□□□□ -1.01
PTPRN-204ENST00000423636 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.74□□□□□ -1.01
PTPRN-204ENST00000423636 IGKV2-29A2NJV5 120 aaPredicted RBP8.74□□□□□ -1.01
PTPRN-204ENST00000423636 CCL24O00175 119 aa8.74□□□□□ -1.01
PTPRN-204ENST00000423636 SPATA3Q8NHX4 192 aa8.74□□□□□ -1.01
PTPRN-204ENST00000423636 PRADC1Q9BSG0 188 aa8.74□□□□□ -1.01
PTPRN-204ENST00000423636 NPC2P61916 151 aa8.73□□□□□ -1.01
PTPRN-204ENST00000423636 DEFB114Q30KQ6 69 aa8.73□□□□□ -1.01
PTPRN-204ENST00000423636 ORMDL2Q53FV1 153 aa8.73□□□□□ -1.01
PTPRN-204ENST00000423636 TOMM6Q96B49 74 aa8.73□□□□□ -1.01
PTPRN-204ENST00000423636 ATP6V0BQ99437 205 aa8.73□□□□□ -1.01
PTPRN-204ENST00000423636 F8VRH5 84 aa8.72□□□□□ -1.01
PTPRN-204ENST00000423636 H7C1H1 209 aa8.72□□□□□ -1.01
PTPRN-204ENST00000423636 M0QY20 66 aa8.72□□□□□ -1.01
PTPRN-204ENST00000423636 FOXI2Q6ZQN5 318 aa8.72□□□□□ -1.01
PTPRN-204ENST00000423636 NEXN-AS1Q8NBZ9 246 aa8.72□□□□□ -1.01
PTPRN-204ENST00000423636 ZNF815PA8K554 130 aa8.72□□□□□ -1.01
PTPRN-204ENST00000423636 ODF3L2Q3SX64 289 aa8.72□□□□□ -1.01
PTPRN-204ENST00000423636 TRGV1A0A0A0MS02 117 aa8.71□□□□□ -1.01
PTPRN-204ENST00000423636 OR11H12B2RN74 326 aa8.71□□□□□ -1.01
PTPRN-204ENST00000423636 NDUFA7O95182 113 aa8.71□□□□□ -1.01
PTPRN-204ENST00000423636 HLA-DRB4P13762 266 aa8.71□□□□□ -1.01
PTPRN-204ENST00000423636 OR11H2Q8NH07 326 aa8.71□□□□□ -1.01
PTPRN-204ENST00000423636 ZNRF2Q8NHG8 242 aa8.71□□□□□ -1.01
PTPRN-204ENST00000423636 LINC01006Q8NI28 216 aa8.71□□□□□ -1.01
PTPRN-204ENST00000423636 HLA-DRB4X5D2U9 266 aa8.71□□□□□ -1.01
PTPRN-204ENST00000423636 A0A0J9YXV3 536 aa8.71□□□□□ -1.02
PTPRN-204ENST00000423636 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
PTPRN-204ENST00000423636 GAGE10A6NGK3 116 aa8.71□□□□□ -1.02
PTPRN-204ENST00000423636 H7C2G1 150 aa8.71□□□□□ -1.02
PTPRN-204ENST00000423636 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.02
PTPRN-204ENST00000423636 IGKV3OR2-268A0A0C4DH90 116 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 APOMO95445 188 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 STHQ8IWL8 128 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 ZMAT4Q9H898 229 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 J3QKU1 62 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 POLR2KP53803 58 aaKnown RBP8.7□□□□□ -1.02
PTPRN-204ENST00000423636 SPXQ9BT56 116 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 BRI3O95415 125 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 SYT8Q8NBV8 401 aa8.7□□□□□ -1.02
PTPRN-204ENST00000423636 VCYO14598 125 aa8.69□□□□□ -1.02
PTPRN-204ENST00000423636 HSD52Q0P140 79 aa8.69□□□□□ -1.02
PTPRN-204ENST00000423636 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTPRN-204ENST00000423636 C4orf3Q8WVX3 66 aa8.69□□□□□ -1.02
PTPRN-204ENST00000423636 C20orf78Q9BR46 151 aa8.69□□□□□ -1.02
PTPRN-204ENST00000423636 PEMTQ9UBM1 199 aa8.69□□□□□ -1.02
PTPRN-204ENST00000423636 KRTAP1-1Q07627 177 aa8.69□□□□□ -1.02
PTPRN-204ENST00000423636 TRAV8-3A0A0A6YYJ7 113 aa8.69□□□□□ -1.02
PTPRN-204ENST00000423636 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
PTPRN-204ENST00000423636 LGALS9O00182 355 aa8.68□□□□□ -1.02
PTPRN-204ENST00000423636 DEFB4AO15263 64 aa8.68□□□□□ -1.02
PTPRN-204ENST00000423636 Q6ZTI0 123 aa8.68□□□□□ -1.02
PTPRN-204ENST00000423636 GAGE1Q13065 139 aa8.68□□□□□ -1.02
PTPRN-204ENST00000423636 MRPL52Q86TS9 123 aaKnown RBP8.68□□□□□ -1.02
PTPRN-204ENST00000423636 ZNF479Q96JC4 524 aa8.68□□□□□ -1.02
PTPRN-204ENST00000423636 IGLV4-69A0A075B6H9 119 aa8.67□□□□□ -1.02
PTPRN-204ENST00000423636 CST9LQ9H4G1 147 aa8.67□□□□□ -1.02
PTPRN-204ENST00000423636 NOP10Q9NPE3 64 aaKnown RBP8.67□□□□□ -1.02
PTPRN-204ENST00000423636 TNFRSF18Q9Y5U5 241 aa8.67□□□□□ -1.02
PTPRN-204ENST00000423636 A6NDN8 102 aa8.67□□□□□ -1.02
PTPRN-204ENST00000423636 IGIPA6NJ69 53 aa8.67□□□□□ -1.02
PTPRN-204ENST00000423636 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
PTPRN-204ENST00000423636 LINC01546A6NGU7 62 aa8.67□□□□□ -1.02
PTPRN-204ENST00000423636 SPCS1Q9Y6A9 102 aa8.67□□□□□ -1.02
PTPRN-204ENST00000423636 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
PTPRN-204ENST00000423636 PLNP26678 52 aa8.66□□□□□ -1.02
PTPRN-204ENST00000423636 ZNF625Q96I27 306 aaPredicted RBP8.66□□□□□ -1.02
PTPRN-204ENST00000423636 TRAV2A0A0B4J234 112 aa8.66□□□□□ -1.02
PTPRN-204ENST00000423636 TMEM89A2RUT3 159 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms