RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 MRPS16Q9Y3D3 137 aaKnown RBP3.87□□□□□ -1.79
LINC00458-201ENST00000423442 A0A096LPF7 62 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 TRAV8-6A0A0B4J262 113 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 FAM74A7A6NL05 159 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 GGTLC3B5MD39 225 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 K7EP13 123 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 BCL2L11O43521 198 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 CDK2AP2O75956 126 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 TYMSP04818 313 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 SFTA3P0C7M3 94 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 EVI2AP22794 236 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 FAM162BQ5T6X4 162 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 LYPD5Q6UWN5 251 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 ERASQ7Z444 233 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 MBD3L1Q8WWY6 194 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 TVP23CQ96ET8 276 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 VSIG2Q96IQ7 327 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 LINC00479Q96M42 142 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 CYTL1Q9NRR1 136 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 ARL2-SNX15V9GYD0 113 aa3.86□□□□□ -1.79
LINC00458-201ENST00000423442 MYCBP2O75592 4640 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 A0A1B0GV50 99 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 A8MWV9 139 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 C16orf90A8MZG2 172 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 K7EQD1 137 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 IFNA1P01562 189 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 MGST1P10620 155 aaKnown RBP3.85□□□□□ -1.79
LINC00458-201ENST00000423442 AKR1C3P42330 323 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 ZNF80P51504 273 aaPredicted RBP3.85□□□□□ -1.79
LINC00458-201ENST00000423442 ZNF726P1Q15940 193 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 NFE4Q86UQ8 179 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 BAGE2Q86Y30 109 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.85□□□□□ -1.79
LINC00458-201ENST00000423442 PTH2Q96A98 100 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 UPK3BQ9BT76 320 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 PHLDA3Q9Y5J5 127 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 LY96Q9Y6Y9 160 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 FAT1Q14517 4588 aa3.85□□□□□ -1.79
LINC00458-201ENST00000423442 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
LINC00458-201ENST00000423442 IGHV3-73A0A0B4J1V6 119 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 TRBV6-4A0A1B0GX49 114 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 M0R036 132 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 NXPH4O95158 308 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 TAGLN2P37802 199 aaKnown RBP3.84□□□□□ -1.79
LINC00458-201ENST00000423442 LINC01547P58512 204 aaPredicted RBP3.84□□□□□ -1.79
LINC00458-201ENST00000423442 OR10J3Q5JRS4 329 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 CFAP126Q5VTH2 177 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 C10orf126Q8N4M7 172 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 SLC25A29Q8N8R3 303 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 ALKBH7Q9BT30 221 aaPredicted RBP3.84□□□□□ -1.79
LINC00458-201ENST00000423442 MANBALQ9NQG1 85 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 BIN3Q9NQY0 253 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 IL36BQ9NZH7 164 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 GNG13Q9P2W3 67 aa3.84□□□□□ -1.79
LINC00458-201ENST00000423442 A0A087WWC5 75 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 TMSB15BA0A087X1C1 80 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 TRBV6-1A0A0K0K1D8 114 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 XKRY2A2RUG3 117 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 GRIFINA4D1Z8 144 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 KRBOX1C9JBD0 128 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 G3V3Q6 166 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 RS1O15537 224 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 PSCAO43653 123 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 PDE6DO43924 150 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 LTAP01374 205 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 ARMS2P0C7Q2 107 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 SMIM17P0DL12 118 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 GATA1P15976 413 aaPredicted RBP3.83□□□□□ -1.8
LINC00458-201ENST00000423442 HERV-K104P63124 156 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 RHOHQ15669 191 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 ZNF506Q5JVG8 444 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 KCNIP4Q6PIL6 250 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 ZFP2Q6ZN57 461 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 Q86TA4 180 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 AKAP14Q86UN6 197 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 SLC51BQ86UW2 128 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 TCTE3Q8IZS6 198 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 ATP6V0E2Q8NHE4 81 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 ZC2HC1AQ96GY0 325 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 C9orf85Q96MD7 179 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 URGCP-MRPS24S4R325 110 aa3.83□□□□□ -1.8
LINC00458-201ENST00000423442 TRAV1-1A0A0B4J248 108 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 IGHV3-38A0A0C4DH36 116 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 H3BVH4 76 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 M0R381 172 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 SH2D1AO60880 128 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 C1QBP02746 253 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 CRYGDP07320 174 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 RNASE3P12724 160 aaKnown RBP3.82□□□□□ -1.8
LINC00458-201ENST00000423442 GNG4P50150 75 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 DNLZQ5SXM8 178 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 FAM74A4Q5TZK3 123 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 SPANXN1Q5VSR9 72 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 COX8CQ7Z4L0 72 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 ZFP82Q8N141 532 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 GTSF1LQ9H1H1 148 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 MED9Q9NWA0 146 aa3.82□□□□□ -1.8
LINC00458-201ENST00000423442 INAFM2P0DMQ5 153 aa3.81□□□□□ -1.8
LINC00458-201ENST00000423442 RPL35P42766 123 aaKnown RBP3.81□□□□□ -1.8
LINC00458-201ENST00000423442 SULT1A2P50226 295 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms