RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 INO80EQ8NBZ0 244 aaPredicted RBP3.58□□□□□ -1.84
HDAC8-212ENST00000421523 NEXN-AS1Q8NBZ9 246 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 OR11H4Q8NGC9 324 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 TCEAL7Q9BRU2 100 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 PRR34Q9NV39 138 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 VAX2Q9UIW0 290 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 KIF25-AS1Q9Y6Z4 181 aa3.58□□□□□ -1.84
HDAC8-212ENST00000421523 IGKV2D-24A0A075B6R9 120 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 BORCS7-ASMTA0A0B4J1R7 106 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 A0A0D9SG52 128 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 MAP1LC3B2A6NCE7 125 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 M0R381 172 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 IFNA7P01567 189 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 OR5AL1P0C617 328 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 SEC11BP0C7V7 166 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 TPT1P13693 172 aaKnown RBP3.57□□□□□ -1.84
HDAC8-212ENST00000421523 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 RAB4BP61018 213 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
HDAC8-212ENST00000421523 Q0VG73 95 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 MPV17L2Q567V2 206 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 ZFP82Q8N141 532 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 OR10AG1Q8NH19 301 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 MBD3L1Q8WWY6 194 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 RPL36ALQ969Q0 106 aaKnown RBP3.57□□□□□ -1.84
HDAC8-212ENST00000421523 UBE2WQ96B02 151 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 RMI2Q96E14 147 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 MAP1LC3BQ9GZQ8 125 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 BATF3Q9NR55 127 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 PHLDA3Q9Y5J5 127 aa3.57□□□□□ -1.84
HDAC8-212ENST00000421523 A0A087WX48 190 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 FXYD6-FXYD2A0A087WZ82 144 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 TMSB15BA0A087X1C1 80 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 PAGE4O60829 102 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 PRSS1P07477 247 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 RPL19P84098 196 aaKnown RBP3.56□□□□□ -1.84
HDAC8-212ENST00000421523 CIRBPQ14011 172 aaKnown RBP3.56□□□□□ -1.84
HDAC8-212ENST00000421523 ELOBQ15370 118 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 AKR1C8PQ5T2L2 129 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 SDIM1Q6ZPB5 146 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 URGCP-MRPS24S4R325 110 aa3.56□□□□□ -1.84
HDAC8-212ENST00000421523 USP17L23D6RBM5 183 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 ARPC5O15511 151 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 SLPIP03973 132 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 UBE2G1P62253 170 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 ZNF345Q14585 488 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 PRR4Q16378 134 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 MIAQ16674 131 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 CST9LP1Q5W188 147 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 DGAT2L7PQ6IED9 249 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 WDR73Q6P4I2 378 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 KCNRGQ8N5I3 272 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 C15orf54Q8N8G6 183 aa3.55□□□□□ -1.84
HDAC8-212ENST00000421523 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.55□□□□□ -1.84
HDAC8-212ENST00000421523 MUC21A0A0G2JKD1 596 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 MUC21A0A140T8X8 626 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 M0QY20 66 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 ANGP03950 147 aaKnown RBP3.54□□□□□ -1.84
HDAC8-212ENST00000421523 S100A9P06702 114 aaKnown RBP3.54□□□□□ -1.84
HDAC8-212ENST00000421523 IGLC6P0CF74 106 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 AKR1C3P42330 323 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 RBX1P62877 108 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 IQCJQ1A5X6 159 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 C14orf177Q52M58 125 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 TMUB2Q71RG4 321 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 BAGE2Q86Y30 109 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 C20orf203Q8NBC4 194 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 STOML3Q8TAV4 291 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 SFT2D1Q8WV19 159 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 C1orf43Q9BWL3 253 aa3.54□□□□□ -1.84
HDAC8-212ENST00000421523 ZNF471Q9BX82 626 aaPredicted RBP3.54□□□□□ -1.84
HDAC8-212ENST00000421523 TRAV1-1A0A0B4J248 108 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 C19orf71A6NCJ1 209 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 HMSDA8MTL9 139 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 UMAD1C9J7I0 102 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 TMEM262E9PQX1 116 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 SMLR1H3BR10 107 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
HDAC8-212ENST00000421523 CCL20P78556 96 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 ZNF56Q15929 161 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 TMEM97Q5BJF2 176 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 REG3GQ6UW15 175 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 LINC00269Q8N2A0 174 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 CLRN3Q8NCR9 226 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 C11orf52Q96A22 123 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 DERL1Q9BUN8 251 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 GFRA4Q9GZZ7 299 aa3.53□□□□□ -1.84
HDAC8-212ENST00000421523 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
HDAC8-212ENST00000421523 TRBV20OR9-2A0A075B6H5 130 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 IGLV4-60A0A075B6I1 120 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 PHOX2AO14813 284 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 HLA-DQA1P01909 254 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 CRPP02741 224 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 RPL35P42766 123 aaKnown RBP3.52□□□□□ -1.85
HDAC8-212ENST00000421523 PKIAP61925 76 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 SPANXN1Q5VSR9 72 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 KCNIP4Q6PIL6 250 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 FAM213BQ8TBF2 198 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms