RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 C1orf43Q9BWL3 253 aa12.31□□□□□ -0.44
VARS2-202ENST00000421263 VAX2Q9UIW0 290 aa12.31□□□□□ -0.44
VARS2-202ENST00000421263 MUC21A0A0G2JKD1 596 aa12.3□□□□□ -0.44
VARS2-202ENST00000421263 MUC21A0A140T8X8 626 aa12.3□□□□□ -0.44
VARS2-202ENST00000421263 KANTRA0A1W2PQU2 76 aa12.3□□□□□ -0.44
VARS2-202ENST00000421263 CIRBP-AS1Q8TBR5 109 aa12.3□□□□□ -0.44
VARS2-202ENST00000421263 LRP1Q07954 4544 aaKnown RBP12.3□□□□□ -0.44
VARS2-202ENST00000421263 J3QL48 77 aa12.29□□□□□ -0.44
VARS2-202ENST00000421263 RPL35P42766 123 aaKnown RBP12.29□□□□□ -0.44
VARS2-202ENST00000421263 PKIAP61925 76 aa12.29□□□□□ -0.44
VARS2-202ENST00000421263 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
VARS2-202ENST00000421263 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
VARS2-202ENST00000421263 C15orf54Q8N8G6 183 aa12.29□□□□□ -0.44
VARS2-202ENST00000421263 C11orf52Q96A22 123 aa12.29□□□□□ -0.44
VARS2-202ENST00000421263 F5H697 171 aa12.28□□□□□ -0.44
VARS2-202ENST00000421263 ANGP03950 147 aaKnown RBP12.28□□□□□ -0.44
VARS2-202ENST00000421263 EIF5AP63241 154 aaKnown RBP12.28□□□□□ -0.44
VARS2-202ENST00000421263 CCL20P78556 96 aa12.28□□□□□ -0.44
VARS2-202ENST00000421263 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.28□□□□□ -0.44
VARS2-202ENST00000421263 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
VARS2-202ENST00000421263 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
VARS2-202ENST00000421263 TRAV1-1A0A0B4J248 108 aa12.27□□□□□ -0.45
VARS2-202ENST00000421263 CRPP02741 224 aa12.27□□□□□ -0.45
VARS2-202ENST00000421263 MIAQ16674 131 aa12.27□□□□□ -0.45
VARS2-202ENST00000421263 DERL1Q9BUN8 251 aa12.27□□□□□ -0.45
VARS2-202ENST00000421263 FAT3Q8TDW7 4589 aa12.27□□□□□ -0.45
VARS2-202ENST00000421263 IGLV2-8P01709 118 aa12.26□□□□□ -0.45
VARS2-202ENST00000421263 IGLC6P0CF74 106 aa12.26□□□□□ -0.45
VARS2-202ENST00000421263 SSTP61278 116 aa12.26□□□□□ -0.45
VARS2-202ENST00000421263 KRTAP26-1Q6PEX3 210 aa12.26□□□□□ -0.45
VARS2-202ENST00000421263 MANBALQ9NQG1 85 aa12.26□□□□□ -0.45
VARS2-202ENST00000421263 SMIM17P0DL12 118 aa12.25□□□□□ -0.45
VARS2-202ENST00000421263 AP1S3Q96PC3 154 aa12.25□□□□□ -0.45
VARS2-202ENST00000421263 C19orf71A6NCJ1 209 aa12.24□□□□□ -0.45
VARS2-202ENST00000421263 USP17L23D6RBM5 183 aa12.24□□□□□ -0.45
VARS2-202ENST00000421263 M0QY20 66 aa12.24□□□□□ -0.45
VARS2-202ENST00000421263 RBX1P62877 108 aa12.24□□□□□ -0.45
VARS2-202ENST00000421263 IQCJQ1A5X6 159 aa12.24□□□□□ -0.45
VARS2-202ENST00000421263 GNG13Q9P2W3 67 aa12.24□□□□□ -0.45
VARS2-202ENST00000421263 PRSS1P07477 247 aa12.23□□□□□ -0.45
VARS2-202ENST00000421263 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
VARS2-202ENST00000421263 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
VARS2-202ENST00000421263 GZMBP10144 247 aa12.22□□□□□ -0.45
VARS2-202ENST00000421263 RAB5CP51148 216 aa12.22□□□□□ -0.45
VARS2-202ENST00000421263 RPS20P60866 119 aaKnown RBP12.22□□□□□ -0.45
VARS2-202ENST00000421263 GAGE6Q13070 117 aa12.22□□□□□ -0.45
VARS2-202ENST00000421263 CENPWQ5EE01 88 aa12.22□□□□□ -0.45
VARS2-202ENST00000421263 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
VARS2-202ENST00000421263 SMIM12Q96EX1 92 aa12.22□□□□□ -0.45
VARS2-202ENST00000421263 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
VARS2-202ENST00000421263 LINC00269Q8N2A0 174 aa12.21□□□□□ -0.45
VARS2-202ENST00000421263 C9orf163Q8N9P6 203 aa12.21□□□□□ -0.45
VARS2-202ENST00000421263 OR2D3Q8NGH3 330 aa12.21□□□□□ -0.45
VARS2-202ENST00000421263 DAZAP1Q96EP5 407 aaKnown RBP12.21□□□□□ -0.45
VARS2-202ENST00000421263 PKHD1L1Q86WI1 4243 aa12.2□□□□□ -0.46
VARS2-202ENST00000421263 RAB19A4D1S5 217 aa12.2□□□□□ -0.46
VARS2-202ENST00000421263 CACNG7P62955 275 aa12.2□□□□□ -0.46
VARS2-202ENST00000421263 SUMO4Q6EEV6 95 aa12.2□□□□□ -0.46
VARS2-202ENST00000421263 HMCN2Q8NDA2 5059 aa12.19□□□□□ -0.46
VARS2-202ENST00000421263 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
VARS2-202ENST00000421263 F2Z2F3 143 aa12.19□□□□□ -0.46
VARS2-202ENST00000421263 H7C1H1 209 aa12.19□□□□□ -0.46
VARS2-202ENST00000421263 TRBV20OR9-2A0A075B6H5 130 aa12.18□□□□□ -0.46
VARS2-202ENST00000421263 A0A1B0GUV1 79 aa12.18□□□□□ -0.46
VARS2-202ENST00000421263 MGPP08493 103 aa12.18□□□□□ -0.46
VARS2-202ENST00000421263 GNG4P50150 75 aa12.18□□□□□ -0.46
VARS2-202ENST00000421263 SULT1A2P50226 295 aa12.18□□□□□ -0.46
VARS2-202ENST00000421263 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
VARS2-202ENST00000421263 C20orf203Q8NBC4 194 aa12.18□□□□□ -0.46
VARS2-202ENST00000421263 TPPP3Q9BW30 176 aa12.18□□□□□ -0.46
VARS2-202ENST00000421263 TEX46H3BTG2 121 aa12.17□□□□□ -0.46
VARS2-202ENST00000421263 PDE6DO43924 150 aa12.17□□□□□ -0.46
VARS2-202ENST00000421263 OXTP01178 125 aa12.17□□□□□ -0.46
VARS2-202ENST00000421263 REG3AQ06141 175 aa12.17□□□□□ -0.46
VARS2-202ENST00000421263 EIF5AL1Q6IS14 154 aaKnown RBP12.17□□□□□ -0.46
VARS2-202ENST00000421263 RASL11AQ6T310 242 aa12.17□□□□□ -0.46
VARS2-202ENST00000421263 CLPSL2Q6UWE3 100 aa12.17□□□□□ -0.46
VARS2-202ENST00000421263 CLRN3Q8NCR9 226 aa12.17□□□□□ -0.46
VARS2-202ENST00000421263 XKRY2A2RUG3 117 aa12.16□□□□□ -0.46
VARS2-202ENST00000421263 P01737 135 aa12.16□□□□□ -0.46
VARS2-202ENST00000421263 NKX2-5P52952 324 aaPredicted RBP12.16□□□□□ -0.46
VARS2-202ENST00000421263 WDR73Q6P4I2 378 aa12.16□□□□□ -0.46
VARS2-202ENST00000421263 LYZL1Q6UWQ5 148 aa12.16□□□□□ -0.46
VARS2-202ENST00000421263 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
VARS2-202ENST00000421263 C9orf62Q8N4C0 152 aa12.16□□□□□ -0.46
VARS2-202ENST00000421263 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
VARS2-202ENST00000421263 NIT2Q9NQR4 276 aa12.16□□□□□ -0.46
VARS2-202ENST00000421263 TRAV8-4A0A0B4J246 113 aa12.15□□□□□ -0.46
VARS2-202ENST00000421263 NTF3P20783 257 aa12.15□□□□□ -0.46
VARS2-202ENST00000421263 MED9Q9NWA0 146 aa12.15□□□□□ -0.46
VARS2-202ENST00000421263 IGLV4-60A0A075B6I1 120 aa12.14□□□□□ -0.47
VARS2-202ENST00000421263 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
VARS2-202ENST00000421263 DPH3P1Q9H4G8 78 aa12.14□□□□□ -0.47
VARS2-202ENST00000421263 BIN3Q9NQY0 253 aa12.14□□□□□ -0.47
VARS2-202ENST00000421263 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.14□□□□□ -0.47
VARS2-202ENST00000421263 PANO1I0J062 215 aa12.13□□□□□ -0.47
VARS2-202ENST00000421263 IFNA1P01562 189 aa12.13□□□□□ -0.47
VARS2-202ENST00000421263 CNBPP62633 177 aaKnown RBP12.13□□□□□ -0.47
VARS2-202ENST00000421263 NUDT10Q8NFP7 164 aa12.13□□□□□ -0.47
VARS2-202ENST00000421263 NUDT11Q96G61 164 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms