RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ZNF295-AS1Q8N0V1 137 aa9.43□□□□□ -0.9
CLCN4-203ENST00000421085 TIRAPP58753 221 aa9.43□□□□□ -0.9
CLCN4-203ENST00000421085 HIST2H2BDQ6DRA6 164 aa9.43□□□□□ -0.9
CLCN4-203ENST00000421085 MAPKAPK5-AS1Q8N8E1 139 aa9.43□□□□□ -0.9
CLCN4-203ENST00000421085 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 NDUFA1O15239 70 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 IGHV4OR15-8A0A075B7B6 117 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 A0A087WW49 117 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 NEXN-AS1Q8NBZ9 246 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 SPTSSBQ8NFR3 76 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 SEM1Q6ZVN7 128 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 MED13Q9UHV7 2174 aa9.42□□□□□ -0.9
CLCN4-203ENST00000421085 IGLV1-47P01700 117 aa9.41□□□□□ -0.9
CLCN4-203ENST00000421085 MLST8Q9BVC4 326 aa9.41□□□□□ -0.9
CLCN4-203ENST00000421085 CXCL5P42830 114 aa9.41□□□□□ -0.9
CLCN4-203ENST00000421085 A0A0U1RQV1 116 aa9.41□□□□□ -0.9
CLCN4-203ENST00000421085 DKK4Q9UBT3 224 aa9.41□□□□□ -0.9
CLCN4-203ENST00000421085 KIAA1671Q9BY89 1806 aa9.41□□□□□ -0.9
CLCN4-203ENST00000421085 CACNA1HO95180 2353 aa9.41□□□□□ -0.9
CLCN4-203ENST00000421085 PDE6GP18545 87 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 Q6ZPA2 131 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 MBD6Q96DN6 1003 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 K7EMT4 169 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 P0DMU3 169 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 FAM231AP0DMU4 169 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 FAM231CP0DMU5 169 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 UNQ9165/PRO28630Q6UXU0 137 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 BRWD1-AS2P59051 145 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 SPAG11BQ08648 103 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 FANCD2OSQ96PS1 177 aa9.4□□□□□ -0.9
CLCN4-203ENST00000421085 IGHV4-61A0A0C4DH41 118 aa9.4□□□□□ -0.91
CLCN4-203ENST00000421085 Q8N7P7 452 aa9.39□□□□□ -0.91
CLCN4-203ENST00000421085 TRIAP1O43715 76 aa9.39□□□□□ -0.91
CLCN4-203ENST00000421085 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
CLCN4-203ENST00000421085 GTF3C1Q12789 2109 aa9.39□□□□□ -0.91
CLCN4-203ENST00000421085 PLXNB3Q9ULL4 1909 aa9.39□□□□□ -0.91
CLCN4-203ENST00000421085 CREBBPQ92793 2442 aa9.39□□□□□ -0.91
CLCN4-203ENST00000421085 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
CLCN4-203ENST00000421085 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
CLCN4-203ENST00000421085 TMEM223A0PJW6 202 aa9.38□□□□□ -0.91
CLCN4-203ENST00000421085 COX7BP24311 80 aa9.38□□□□□ -0.91
CLCN4-203ENST00000421085 ABCA4P78363 2273 aa9.37□□□□□ -0.91
CLCN4-203ENST00000421085 BPY2O14599 106 aa9.37□□□□□ -0.91
CLCN4-203ENST00000421085 MRPS12O15235 138 aaKnown RBP9.37□□□□□ -0.91
CLCN4-203ENST00000421085 PLA2G2CQ5R387 149 aa9.37□□□□□ -0.91
CLCN4-203ENST00000421085 GPHB5Q86YW7 130 aa9.37□□□□□ -0.91
CLCN4-203ENST00000421085 SLPIP03973 132 aa9.37□□□□□ -0.91
CLCN4-203ENST00000421085 A0A0J9YX75 114 aa9.37□□□□□ -0.91
CLCN4-203ENST00000421085 WT1P19544 449 aaPredicted RBP9.37□□□□□ -0.91
CLCN4-203ENST00000421085 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
CLCN4-203ENST00000421085 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
CLCN4-203ENST00000421085 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
CLCN4-203ENST00000421085 SIRPDQ9H106 197 aa9.36□□□□□ -0.91
CLCN4-203ENST00000421085 TRBV30A0A0K0K1B3 111 aa9.36□□□□□ -0.91
CLCN4-203ENST00000421085 IGHV4-30-2A0A087WSY4 118 aa9.36□□□□□ -0.91
CLCN4-203ENST00000421085 CCDC179H3BU77 68 aa9.36□□□□□ -0.91
CLCN4-203ENST00000421085 ZFP36P26651 326 aaKnown RBP9.36□□□□□ -0.91
CLCN4-203ENST00000421085 COL4A3Q01955 1670 aa9.36□□□□□ -0.91
CLCN4-203ENST00000421085 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
CLCN4-203ENST00000421085 FRMPD3Q5JV73 1810 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 H0Y9J4 135 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 KLK12Q9UKR0 248 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 NDUFA7O95182 113 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
CLCN4-203ENST00000421085 C10orf105Q8TEF2 133 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 DSCAML1Q8TD84 2053 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 CDKN2A-AS1Q9UH64 79 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLCN4-203ENST00000421085 FAM240AA0A1B0GVK7 77 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 IGFL2Q6UWQ7 119 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 PCNX1Q96RV3 2341 aa9.35□□□□□ -0.91
CLCN4-203ENST00000421085 UBE2AP49459 152 aa9.34□□□□□ -0.91
CLCN4-203ENST00000421085 CRIP1P50238 77 aa9.34□□□□□ -0.91
CLCN4-203ENST00000421085 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
CLCN4-203ENST00000421085 U3KQK5 164 aa9.34□□□□□ -0.91
CLCN4-203ENST00000421085 WFDC11Q8NEX6 87 aa9.34□□□□□ -0.91
CLCN4-203ENST00000421085 CRIP3Q6Q6R5 217 aa9.34□□□□□ -0.91
CLCN4-203ENST00000421085 CCDC140Q96MF4 163 aa9.34□□□□□ -0.91
CLCN4-203ENST00000421085 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
CLCN4-203ENST00000421085 LINC00308Q8TCZ7 52 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 LINC00467Q9BRT7 94 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 RNF185Q96GF1 192 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 DEFB4AO15263 64 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 C9orf66Q5T8R8 295 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 ATP5EP2Q5VTU8 51 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 TANC1Q9C0D5 1861 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 NOTCH4Q99466 2003 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 ZGRF1Q86YA3 2104 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
CLCN4-203ENST00000421085 TRBV10-1A0A0K0K1A3 114 aa9.32□□□□□ -0.92
CLCN4-203ENST00000421085 CFAP126Q5VTH2 177 aa9.32□□□□□ -0.92
CLCN4-203ENST00000421085 TMEM263Q8WUH6 116 aaKnown RBP9.32□□□□□ -0.92
CLCN4-203ENST00000421085 XGP55808 180 aa9.32□□□□□ -0.92
CLCN4-203ENST00000421085 V9GYY9 64 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms