RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 DPH3Q96FX2 82 aa11.16□□□□□ -0.62
AP000550.1-201ENST00000420508 CARD19Q96LW7 228 aa11.16□□□□□ -0.62
AP000550.1-201ENST00000420508 VSIG2Q96IQ7 327 aa11.16□□□□□ -0.62
AP000550.1-201ENST00000420508 TINCRA0A1B0GVN0 87 aa11.16□□□□□ -0.62
AP000550.1-201ENST00000420508 ATP5G1P05496 136 aa11.16□□□□□ -0.62
AP000550.1-201ENST00000420508 PLA2G5P39877 138 aa11.16□□□□□ -0.62
AP000550.1-201ENST00000420508 C20orf173Q96LM9 149 aa11.15□□□□□ -0.62
AP000550.1-201ENST00000420508 TM2D2Q9BX73 214 aa11.15□□□□□ -0.62
AP000550.1-201ENST00000420508 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.62
AP000550.1-201ENST00000420508 PTPRQQ9UMZ3 2332 aa11.15□□□□□ -0.62
AP000550.1-201ENST00000420508 DNAJC9-AS1A6NH13 148 aa11.15□□□□□ -0.62
AP000550.1-201ENST00000420508 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
AP000550.1-201ENST00000420508 DSCAMO60469 2012 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 PFN2P35080 140 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 PKIGQ9Y2B9 76 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 A4D1N5 150 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 UBE2DNLQ8IWF7 75 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 SPANXCQ9NY87 97 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 KLLNB2CW77 178 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 ANGP03950 147 aaKnown RBP11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 MUSTN1Q8IVN3 82 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 NDUFA11Q86Y39 141 aa11.14□□□□□ -0.63
AP000550.1-201ENST00000420508 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
AP000550.1-201ENST00000420508 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
AP000550.1-201ENST00000420508 TEN1Q86WV5 123 aa11.13□□□□□ -0.63
AP000550.1-201ENST00000420508 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
AP000550.1-201ENST00000420508 SPRY2O43597 315 aa11.12□□□□□ -0.63
AP000550.1-201ENST00000420508 MED13LQ71F56 2210 aa11.12□□□□□ -0.63
AP000550.1-201ENST00000420508 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
AP000550.1-201ENST00000420508 ANKRD29Q8N6D5 301 aa11.12□□□□□ -0.63
AP000550.1-201ENST00000420508 NRGNQ92686 78 aa11.12□□□□□ -0.63
AP000550.1-201ENST00000420508 A0A0B4J2C4 111 aa11.12□□□□□ -0.63
AP000550.1-201ENST00000420508 Q71RC1 249 aaPredicted RBP11.12□□□□□ -0.63
AP000550.1-201ENST00000420508 H3BT86 120 aa11.12□□□□□ -0.63
AP000550.1-201ENST00000420508 ARFGEF3Q5TH69 2177 aa11.11□□□□□ -0.63
AP000550.1-201ENST00000420508 PRR14LQ5THK1 2151 aa11.11□□□□□ -0.63
AP000550.1-201ENST00000420508 PRB1P04280 392 aa11.11□□□□□ -0.63
AP000550.1-201ENST00000420508 F8WEM9 126 aa11.11□□□□□ -0.63
AP000550.1-201ENST00000420508 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
AP000550.1-201ENST00000420508 GYPEP15421 78 aa11.11□□□□□ -0.63
AP000550.1-201ENST00000420508 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
AP000550.1-201ENST00000420508 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
AP000550.1-201ENST00000420508 NRACQ8N912 160 aa11.1□□□□□ -0.63
AP000550.1-201ENST00000420508 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
AP000550.1-201ENST00000420508 UBL5Q9BZL1 73 aa11.09□□□□□ -0.63
AP000550.1-201ENST00000420508 COX7A2LO14548 114 aa11.09□□□□□ -0.63
AP000550.1-201ENST00000420508 LINC01620Q4KN68 170 aa11.09□□□□□ -0.63
AP000550.1-201ENST00000420508 NTN5Q8WTR8 489 aaPredicted RBP11.09□□□□□ -0.63
AP000550.1-201ENST00000420508 ZNF702PQ9H963 129 aa11.09□□□□□ -0.63
AP000550.1-201ENST00000420508 M0QY20 66 aa11.09□□□□□ -0.63
AP000550.1-201ENST00000420508 HHLA3Q9XRX5 114 aa11.09□□□□□ -0.63
AP000550.1-201ENST00000420508 IGHV3-30-3P0DP02 117 aa11.08□□□□□ -0.64
AP000550.1-201ENST00000420508 NKAPP1Q8N9T2 125 aa11.08□□□□□ -0.64
AP000550.1-201ENST00000420508 C9orf85Q96MD7 179 aa11.08□□□□□ -0.64
AP000550.1-201ENST00000420508 DEFB1P60022 68 aa11.08□□□□□ -0.64
AP000550.1-201ENST00000420508 MIAQ16674 131 aa11.08□□□□□ -0.64
AP000550.1-201ENST00000420508 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
AP000550.1-201ENST00000420508 RS1O15537 224 aa11.07□□□□□ -0.64
AP000550.1-201ENST00000420508 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
AP000550.1-201ENST00000420508 TIRAPP58753 221 aa11.07□□□□□ -0.64
AP000550.1-201ENST00000420508 SND1-IT1Q9HBX3 110 aa11.07□□□□□ -0.64
AP000550.1-201ENST00000420508 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
AP000550.1-201ENST00000420508 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
AP000550.1-201ENST00000420508 PSCAO43653 123 aa11.06□□□□□ -0.64
AP000550.1-201ENST00000420508 XCL1P47992 114 aa11.06□□□□□ -0.64
AP000550.1-201ENST00000420508 ZMAT4Q9H898 229 aa11.06□□□□□ -0.64
AP000550.1-201ENST00000420508 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
AP000550.1-201ENST00000420508 LINC00310P59036 64 aa11.06□□□□□ -0.64
AP000550.1-201ENST00000420508 RNASE3P12724 160 aaKnown RBP11.05□□□□□ -0.64
AP000550.1-201ENST00000420508 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
AP000550.1-201ENST00000420508 BAALC-AS2P0C853 105 aa11.05□□□□□ -0.64
AP000550.1-201ENST00000420508 MRGPRG-AS1Q2M3A8 158 aa11.05□□□□□ -0.64
AP000550.1-201ENST00000420508 DEFB121Q5J5C9 76 aa11.05□□□□□ -0.64
AP000550.1-201ENST00000420508 TTTY13Q9BZ97 58 aa11.05□□□□□ -0.64
AP000550.1-201ENST00000420508 HIST1H4AP62805 103 aaKnown RBP11.05□□□□□ -0.64
AP000550.1-201ENST00000420508 DCANP1Q8TF63 244 aa11.05□□□□□ -0.64
AP000550.1-201ENST00000420508 TANC2Q9HCD6 1990 aa11.04□□□□□ -0.64
AP000550.1-201ENST00000420508 TIMM17BO60830 172 aa11.04□□□□□ -0.64
AP000550.1-201ENST00000420508 Q6ZSV7 163 aa11.04□□□□□ -0.64
AP000550.1-201ENST00000420508 IGLV4-3A0A075B6K6 122 aa11.04□□□□□ -0.64
AP000550.1-201ENST00000420508 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
AP000550.1-201ENST00000420508 NFE4Q86UQ8 179 aa11.04□□□□□ -0.64
AP000550.1-201ENST00000420508 TRBV6-4A0A1B0GX49 114 aa11.03□□□□□ -0.64
AP000550.1-201ENST00000420508 NXPH4O95158 308 aa11.03□□□□□ -0.64
AP000550.1-201ENST00000420508 CRLF1O75462 422 aa11.03□□□□□ -0.64
AP000550.1-201ENST00000420508 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
AP000550.1-201ENST00000420508 ZNF843Q8N446 348 aa11.03□□□□□ -0.64
AP000550.1-201ENST00000420508 ZNF22P17026 224 aaPredicted RBP11.02□□□□□ -0.64
AP000550.1-201ENST00000420508 DSCR8Q96T75 97 aa11.02□□□□□ -0.64
AP000550.1-201ENST00000420508 C11orf21Q9P2W6 132 aa11.02□□□□□ -0.64
AP000550.1-201ENST00000420508 G3V4G9 280 aa11.02□□□□□ -0.65
AP000550.1-201ENST00000420508 CFAP126Q5VTH2 177 aa11.02□□□□□ -0.65
AP000550.1-201ENST00000420508 Q6ZUT4 128 aa11.02□□□□□ -0.65
AP000550.1-201ENST00000420508 FOXI1Q12951 378 aa11.02□□□□□ -0.65
AP000550.1-201ENST00000420508 C5orf38Q86SI9 138 aa11.02□□□□□ -0.65
AP000550.1-201ENST00000420508 C1orf43Q9BWL3 253 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms